RNA–Protein interactions for RNA: ENST00000528930.5

SSBP3-212, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best)

Gene SSBP3, Length 862 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-212ENST00000528930 GTPBP4Q9BZE4 634 aaKnown RBP8.97□□□□□ -0.97
SSBP3-212ENST00000528930 TPSD1Q9BZJ3 242 aa8.97□□□□□ -0.97
SSBP3-212ENST00000528930 SNX25Q9H3E2 840 aa8.97□□□□□ -0.97
SSBP3-212ENST00000528930 TASP1Q9H6P5 420 aa8.97□□□□□ -0.97
SSBP3-212ENST00000528930 APOBEC3GQ9HC16 384 aaKnown RBP8.97□□□□□ -0.97
SSBP3-212ENST00000528930 TMEM8AQ9HCN3 771 aa8.97□□□□□ -0.97
SSBP3-212ENST00000528930 TMEM30AQ9NV96 361 aa8.97□□□□□ -0.97
SSBP3-212ENST00000528930 MAGEC2Q9UBF1 373 aaPredicted RBP8.97□□□□□ -0.97
SSBP3-212ENST00000528930 MAN2B2Q9Y2E5 1009 aa8.97□□□□□ -0.97
SSBP3-212ENST00000528930 OBSL1O75147 1896 aa8.97□□□□□ -0.97
SSBP3-212ENST00000528930 TMEM131Q92545 1883 aa8.97□□□□□ -0.97
SSBP3-212ENST00000528930 ZFHX3Q15911 3703 aa8.97□□□□□ -0.97
SSBP3-212ENST00000528930 BSNQ9UPA5 3926 aa8.96□□□□□ -0.97
SSBP3-212ENST00000528930 CABIN1Q9Y6J0 2220 aa8.96□□□□□ -0.97
SSBP3-212ENST00000528930 PLK4O00444 970 aa8.96□□□□□ -0.98
SSBP3-212ENST00000528930 TADA3O75528 432 aa8.96□□□□□ -0.98
SSBP3-212ENST00000528930 WEE1P30291 646 aa8.96□□□□□ -0.98
SSBP3-212ENST00000528930 CDC25CP30307 473 aa8.96□□□□□ -0.98
SSBP3-212ENST00000528930 GTF2H1P32780 548 aa8.96□□□□□ -0.98
SSBP3-212ENST00000528930 ASPAP45381 313 aa8.96□□□□□ -0.98
SSBP3-212ENST00000528930 CACNA2D1P54289 1103 aa8.96□□□□□ -0.98
SSBP3-212ENST00000528930 NLRP12P59046 1061 aa8.96□□□□□ -0.98
SSBP3-212ENST00000528930 FKBP3Q00688 224 aaKnown RBP8.96□□□□□ -0.98
SSBP3-212ENST00000528930 LRRC63Q05C16 580 aa8.96□□□□□ -0.98
SSBP3-212ENST00000528930 TAF12Q16514 161 aa8.96□□□□□ -0.98
SSBP3-212ENST00000528930 SPDYCQ5MJ68 293 aa8.96□□□□□ -0.98
SSBP3-212ENST00000528930 GPR158Q5T848 1215 aa8.96□□□□□ -0.98
SSBP3-212ENST00000528930 KRT39Q6A163 491 aa8.96□□□□□ -0.98
SSBP3-212ENST00000528930 VSTM1Q6UX27 236 aa8.96□□□□□ -0.98
SSBP3-212ENST00000528930 SCARA5Q6ZMJ2 495 aa8.96□□□□□ -0.98
SSBP3-212ENST00000528930 PAQR9Q6ZVX9 377 aa8.96□□□□□ -0.98
SSBP3-212ENST00000528930 LPCAT2Q7L5N7 544 aa8.96□□□□□ -0.98
SSBP3-212ENST00000528930 SCN4BQ8IWT1 228 aa8.96□□□□□ -0.98
SSBP3-212ENST00000528930 YAF2Q8IY57 180 aa8.96□□□□□ -0.98
SSBP3-212ENST00000528930 B3GALNT2Q8NCR0 500 aa8.96□□□□□ -0.98
SSBP3-212ENST00000528930 SEMA4DQ92854 862 aa8.96□□□□□ -0.98
SSBP3-212ENST00000528930 TRMT2BQ96GJ1 504 aaKnown RBP8.96□□□□□ -0.98
SSBP3-212ENST00000528930 DHTKD1Q96HY7 919 aaPredicted RBP8.96□□□□□ -0.98
SSBP3-212ENST00000528930 SPATA17Q96L03 361 aa8.96□□□□□ -0.98
SSBP3-212ENST00000528930 CNOT6LQ96LI5 555 aaKnown RBP8.96□□□□□ -0.98
SSBP3-212ENST00000528930 TSG101Q99816 390 aa8.96□□□□□ -0.98
SSBP3-212ENST00000528930 DUSP9Q99956 384 aaKnown RBP8.96□□□□□ -0.98
SSBP3-212ENST00000528930 B3GNT5Q9BYG0 378 aa8.96□□□□□ -0.98
SSBP3-212ENST00000528930 SLITRK6Q9H5Y7 841 aa8.96□□□□□ -0.98
SSBP3-212ENST00000528930 MAGED2Q9UNF1 606 aaPredicted RBP8.96□□□□□ -0.98
SSBP3-212ENST00000528930 TLN1Q9Y490 2541 aaKnown RBP8.96□□□□□ -0.98
SSBP3-212ENST00000528930 TP53BP1Q12888 1972 aaPredicted RBP8.95□□□□□ -0.98
SSBP3-212ENST00000528930 LRBAP50851 2863 aa8.95□□□□□ -0.98
SSBP3-212ENST00000528930 BIN1O00499 593 aa8.95□□□□□ -0.98
SSBP3-212ENST00000528930 CLDN5O00501 218 aa8.95□□□□□ -0.98
SSBP3-212ENST00000528930 TRDMT1O14717 391 aaKnown RBP8.95□□□□□ -0.98
SSBP3-212ENST00000528930 SLC16A3O15427 465 aaKnown RBP8.95□□□□□ -0.98
SSBP3-212ENST00000528930 PRAMEF12O95522 483 aa8.95□□□□□ -0.98
SSBP3-212ENST00000528930 ATXN1LP0C7T5 689 aaKnown RBP8.95□□□□□ -0.98
SSBP3-212ENST00000528930 EPB41P11171 864 aaKnown RBP8.95□□□□□ -0.98
SSBP3-212ENST00000528930 KRT10P13645 584 aa8.95□□□□□ -0.98
SSBP3-212ENST00000528930 ITPKAP23677 461 aa8.95□□□□□ -0.98
SSBP3-212ENST00000528930 GRIK1P39086 918 aa8.95□□□□□ -0.98
SSBP3-212ENST00000528930 PIK3CAP42336 1068 aa8.95□□□□□ -0.98
SSBP3-212ENST00000528930 NOP14P78316 857 aaKnown RBP8.95□□□□□ -0.98
SSBP3-212ENST00000528930 CYP27A1Q02318 531 aa8.95□□□□□ -0.98
SSBP3-212ENST00000528930 GRSF1Q12849 480 aaKnown RBP eCLIP8.95□□□□□ -0.98
SSBP3-212ENST00000528930 PREPLQ4J6C6 727 aaPredicted RBP8.95□□□□□ -0.98
SSBP3-212ENST00000528930 ARHGAP29Q52LW3 1261 aa8.95□□□□□ -0.98
SSBP3-212ENST00000528930 ARHGAP15Q53QZ3 475 aa8.95□□□□□ -0.98
SSBP3-212ENST00000528930 LYSMD4Q5XG99 296 aa8.95□□□□□ -0.98
SSBP3-212ENST00000528930 TXNDC8Q6A555 127 aa8.95□□□□□ -0.98
SSBP3-212ENST00000528930 TTI2Q6NXR4 508 aa8.95□□□□□ -0.98
SSBP3-212ENST00000528930 FOXR2Q6PJQ5 311 aa8.95□□□□□ -0.98
SSBP3-212ENST00000528930 ATG14Q6ZNE5 492 aa8.95□□□□□ -0.98
SSBP3-212ENST00000528930 CLEC17AQ6ZS10 378 aa8.95□□□□□ -0.98
SSBP3-212ENST00000528930 ARMCX6Q7L4S7 300 aa8.95□□□□□ -0.98
SSBP3-212ENST00000528930 RABEPKQ7Z6M1 372 aa8.95□□□□□ -0.98
SSBP3-212ENST00000528930 FILIP1Q7Z7B0 1213 aa8.95□□□□□ -0.98
SSBP3-212ENST00000528930 CRYBG2Q8N1P7 616 aa8.95□□□□□ -0.98
SSBP3-212ENST00000528930 TTC8Q8TAM2 541 aa8.95□□□□□ -0.98
SSBP3-212ENST00000528930 RNF217Q8TC41 542 aa8.95□□□□□ -0.98
SSBP3-212ENST00000528930 ACDQ96AP0 544 aa8.95□□□□□ -0.98
SSBP3-212ENST00000528930 C8orf48Q96LL4 319 aa8.95□□□□□ -0.98
SSBP3-212ENST00000528930 CEP295NLQ96MC4 621 aa8.95□□□□□ -0.98
SSBP3-212ENST00000528930 TWNKQ96RR1 684 aa8.95□□□□□ -0.98
SSBP3-212ENST00000528930 TTLL2Q9BWV7 592 aa8.95□□□□□ -0.98
SSBP3-212ENST00000528930 ZNF518BQ9C0D4 1074 aa8.95□□□□□ -0.98
SSBP3-212ENST00000528930 MMRN2Q9H8L6 949 aa8.95□□□□□ -0.98
SSBP3-212ENST00000528930 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.95□□□□□ -0.98
SSBP3-212ENST00000528930 TMPRSS4Q9NRS4 437 aa8.95□□□□□ -0.98
SSBP3-212ENST00000528930 HMGXB4Q9UGU5 601 aa8.95□□□□□ -0.98
SSBP3-212ENST00000528930 ZMYM5Q9UJ78 669 aa8.95□□□□□ -0.98
SSBP3-212ENST00000528930 COQ4Q9Y3A0 265 aa8.95□□□□□ -0.98
SSBP3-212ENST00000528930 HEMK1Q9Y5R4 338 aaPredicted RBP8.95□□□□□ -0.98
SSBP3-212ENST00000528930 ANAPC1Q9H1A4 1944 aa8.94□□□□□ -0.98
SSBP3-212ENST00000528930 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa8.94□□□□□ -0.98
SSBP3-212ENST00000528930 F8VP50 259 aa8.94□□□□□ -0.98
SSBP3-212ENST00000528930 PSMA7O14818 248 aa8.94□□□□□ -0.98
SSBP3-212ENST00000528930 EGFP01133 1207 aa8.94□□□□□ -0.98
SSBP3-212ENST00000528930 SYPP08247 313 aa8.94□□□□□ -0.98
SSBP3-212ENST00000528930 P4HA1P13674 534 aa8.94□□□□□ -0.98
SSBP3-212ENST00000528930 DDX6P26196 483 aaKnown RBP eCLIP8.94□□□□□ -0.98
SSBP3-212ENST00000528930 ELAVL4P26378 380 aaKnown RBP8.94□□□□□ -0.98
SSBP3-212ENST00000528930 P2RY2P41231 377 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms