RNA–Protein interactions for RNA: ENST00000528599.1

TRAF3IP2-211, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best)

Gene TRAF3IP2, Length 1,663 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-211ENST00000528599 ADRA1BP35368 520 aa12.62□□□□□ -0.39
TRAF3IP2-211ENST00000528599 KPNA1P52294 538 aaPredicted RBP12.62□□□□□ -0.39
TRAF3IP2-211ENST00000528599 PPP2R5DQ14738 602 aa12.62□□□□□ -0.39
TRAF3IP2-211ENST00000528599 PEX26Q7Z412 305 aa12.62□□□□□ -0.39
TRAF3IP2-211ENST00000528599 ST13P5Q8NFI4 369 aaPredicted RBP12.62□□□□□ -0.39
TRAF3IP2-211ENST00000528599 SH3RF2Q8TEC5 729 aa12.62□□□□□ -0.39
TRAF3IP2-211ENST00000528599 RNF34Q969K3 372 aa12.62□□□□□ -0.39
TRAF3IP2-211ENST00000528599 RSPRY1Q96DX4 576 aa12.62□□□□□ -0.39
TRAF3IP2-211ENST00000528599 C16orf45Q96MC5 204 aaPredicted RBP12.62□□□□□ -0.39
TRAF3IP2-211ENST00000528599 ASB16Q96NS5 453 aa12.62□□□□□ -0.39
TRAF3IP2-211ENST00000528599 ALS2CR12Q96Q35 445 aa12.62□□□□□ -0.39
TRAF3IP2-211ENST00000528599 NCAPGQ9BPX3 1015 aa12.62□□□□□ -0.39
TRAF3IP2-211ENST00000528599 MAGEB5Q9BZ81 275 aa12.62□□□□□ -0.39
TRAF3IP2-211ENST00000528599 TKTL2Q9H0I9 626 aa12.62□□□□□ -0.39
TRAF3IP2-211ENST00000528599 WDCPQ9H6R7 721 aa12.62□□□□□ -0.39
TRAF3IP2-211ENST00000528599 ZWILCHQ9H900 591 aa12.62□□□□□ -0.39
TRAF3IP2-211ENST00000528599 TDP1Q9NUW8 608 aa12.62□□□□□ -0.39
TRAF3IP2-211ENST00000528599 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.62□□□□□ -0.39
TRAF3IP2-211ENST00000528599 ARHGEF38Q9NXL2 777 aa12.62□□□□□ -0.39
TRAF3IP2-211ENST00000528599 XPO7Q9UIA9 1087 aaKnown RBP12.62□□□□□ -0.39
TRAF3IP2-211ENST00000528599 PACSIN2Q9UNF0 486 aaPredicted RBP12.62□□□□□ -0.39
TRAF3IP2-211ENST00000528599 DYNC1I1O14576 645 aa12.61□□□□□ -0.39
TRAF3IP2-211ENST00000528599 SCAMP3O14828 347 aaKnown RBP12.61□□□□□ -0.39
TRAF3IP2-211ENST00000528599 PRPSAP2O60256 369 aa12.61□□□□□ -0.39
TRAF3IP2-211ENST00000528599 LAMP2P13473 410 aa12.61□□□□□ -0.39
TRAF3IP2-211ENST00000528599 SP100P23497 879 aaPredicted RBP12.61□□□□□ -0.39
TRAF3IP2-211ENST00000528599 FCARP24071 287 aa12.61□□□□□ -0.39
TRAF3IP2-211ENST00000528599 GBP2P32456 591 aaPredicted RBP12.61□□□□□ -0.39
TRAF3IP2-211ENST00000528599 VIPR2P41587 438 aa12.61□□□□□ -0.39
TRAF3IP2-211ENST00000528599 MARCKSL1P49006 195 aa12.61□□□□□ -0.39
TRAF3IP2-211ENST00000528599 GNG11P61952 73 aa12.61□□□□□ -0.39
TRAF3IP2-211ENST00000528599 ATP13A4Q4VNC1 1196 aa12.61□□□□□ -0.39
TRAF3IP2-211ENST00000528599 KCNT1Q5JUK3 1230 aa12.61□□□□□ -0.39
TRAF3IP2-211ENST00000528599 BRMS1LQ5PSV4 323 aa12.61□□□□□ -0.39
TRAF3IP2-211ENST00000528599 TTC16Q8NEE8 873 aa12.61□□□□□ -0.39
TRAF3IP2-211ENST00000528599 KRT35Q92764 455 aa12.61□□□□□ -0.39
TRAF3IP2-211ENST00000528599 SMARCD2Q92925 531 aa12.61□□□□□ -0.39
TRAF3IP2-211ENST00000528599 PLD4Q96BZ4 506 aa12.61□□□□□ -0.39
TRAF3IP2-211ENST00000528599 ACSF2Q96CM8 615 aaPredicted RBP12.61□□□□□ -0.39
TRAF3IP2-211ENST00000528599 LRRC3BQ96PB8 259 aa12.61□□□□□ -0.39
TRAF3IP2-211ENST00000528599 WDR24Q96S15 920 aa12.61□□□□□ -0.39
TRAF3IP2-211ENST00000528599 COL25A1Q9BXS0 654 aaPredicted RBP12.61□□□□□ -0.39
TRAF3IP2-211ENST00000528599 GPATCH2LQ9NWQ4 482 aa12.61□□□□□ -0.39
TRAF3IP2-211ENST00000528599 CFAP97Q9P2B7 532 aa12.61□□□□□ -0.39
TRAF3IP2-211ENST00000528599 AMFRQ9UKV5 643 aa12.61□□□□□ -0.39
TRAF3IP2-211ENST00000528599 DOCK8Q8NF50 2099 aa12.61□□□□□ -0.39
TRAF3IP2-211ENST00000528599 HELZP42694 1942 aaKnown RBP12.61□□□□□ -0.39
TRAF3IP2-211ENST00000528599 MOCS2O96007 188 aaPredicted RBP12.61□□□□□ -0.39
TRAF3IP2-211ENST00000528599 RARAP10276 462 aa12.61□□□□□ -0.39
TRAF3IP2-211ENST00000528599 SLC2A3P11169 496 aa12.61□□□□□ -0.39
TRAF3IP2-211ENST00000528599 CORO1AP31146 461 aaKnown RBP12.61□□□□□ -0.39
TRAF3IP2-211ENST00000528599 GJC1P36383 396 aa12.61□□□□□ -0.39
TRAF3IP2-211ENST00000528599 ZP2Q05996 745 aa12.61□□□□□ -0.39
TRAF3IP2-211ENST00000528599 CA9Q16790 459 aa12.61□□□□□ -0.39
TRAF3IP2-211ENST00000528599 HADHQ16836 314 aaKnown RBP12.61□□□□□ -0.39
TRAF3IP2-211ENST00000528599 SMTNL2Q2TAL5 461 aa12.61□□□□□ -0.39
TRAF3IP2-211ENST00000528599 MEI1Q5TIA1 1274 aa12.61□□□□□ -0.39
TRAF3IP2-211ENST00000528599 NUGGCQ68CJ6 796 aa12.61□□□□□ -0.39
TRAF3IP2-211ENST00000528599 DENND1CQ8IV53 801 aa12.61□□□□□ -0.39
TRAF3IP2-211ENST00000528599 RHOT1Q8IXI2 618 aa12.61□□□□□ -0.39
TRAF3IP2-211ENST00000528599 NTAN1Q96AB6 310 aa12.61□□□□□ -0.39
TRAF3IP2-211ENST00000528599 SNRNP25Q9BV90 132 aaKnown RBP12.61□□□□□ -0.39
TRAF3IP2-211ENST00000528599 TRPV4Q9HBA0 871 aa12.61□□□□□ -0.39
TRAF3IP2-211ENST00000528599 TMEM51Q9NW97 253 aa12.61□□□□□ -0.39
TRAF3IP2-211ENST00000528599 FZD10Q9ULW2 581 aa12.61□□□□□ -0.39
TRAF3IP2-211ENST00000528599 SNX10Q9Y5X0 201 aa12.61□□□□□ -0.39
TRAF3IP2-211ENST00000528599 NUP210Q8TEM1 1887 aaPredicted RBP12.6□□□□□ -0.39
TRAF3IP2-211ENST00000528599 FANCGO15287 622 aa12.6□□□□□ -0.39
TRAF3IP2-211ENST00000528599 PAGE1O75459 146 aa12.6□□□□□ -0.39
TRAF3IP2-211ENST00000528599 APOEP02649 317 aa12.6□□□□□ -0.39
TRAF3IP2-211ENST00000528599 TCF3P15923 654 aa12.6□□□□□ -0.39
TRAF3IP2-211ENST00000528599 CTNNA2P26232 953 aa12.6□□□□□ -0.39
TRAF3IP2-211ENST00000528599 CTNNA1P35221 906 aaKnown RBP12.6□□□□□ -0.39
TRAF3IP2-211ENST00000528599 HARS2P49590 506 aaKnown RBP12.6□□□□□ -0.39
TRAF3IP2-211ENST00000528599 PEX5P50542 639 aa12.6□□□□□ -0.39
TRAF3IP2-211ENST00000528599 SCAPQ12770 1279 aa12.6□□□□□ -0.39
TRAF3IP2-211ENST00000528599 USP4Q13107 963 aa12.6□□□□□ -0.39
TRAF3IP2-211ENST00000528599 ZNF77Q15935 545 aa12.6□□□□□ -0.39
TRAF3IP2-211ENST00000528599 PUS10Q3MIT2 529 aaKnown RBP12.6□□□□□ -0.39
TRAF3IP2-211ENST00000528599 BOLA3Q53S33 107 aa12.6□□□□□ -0.39
TRAF3IP2-211ENST00000528599 ERMARDQ5T6L9 678 aa12.6□□□□□ -0.39
TRAF3IP2-211ENST00000528599 LRRC38Q5VT99 294 aa12.6□□□□□ -0.39
TRAF3IP2-211ENST00000528599 NADSYN1Q6IA69 706 aa12.6□□□□□ -0.39
TRAF3IP2-211ENST00000528599 Q6ZNB5 142 aa12.6□□□□□ -0.39
TRAF3IP2-211ENST00000528599 HTR3DQ70Z44 454 aa12.6□□□□□ -0.39
TRAF3IP2-211ENST00000528599 POLNQ7Z5Q5 900 aa12.6□□□□□ -0.39
TRAF3IP2-211ENST00000528599 UNC45BQ8IWX7 931 aa12.6□□□□□ -0.39
TRAF3IP2-211ENST00000528599 PYROXD2Q8N2H3 581 aa12.6□□□□□ -0.39
TRAF3IP2-211ENST00000528599 CELF5Q8N6W0 485 aaKnown RBP12.6□□□□□ -0.39
TRAF3IP2-211ENST00000528599 KIF18AQ8NI77 898 aa12.6□□□□□ -0.39
TRAF3IP2-211ENST00000528599 ALG3Q92685 438 aa12.6□□□□□ -0.39
TRAF3IP2-211ENST00000528599 HES6Q96HZ4 224 aa12.6□□□□□ -0.39
TRAF3IP2-211ENST00000528599 TLR10Q9BXR5 811 aa12.6□□□□□ -0.39
TRAF3IP2-211ENST00000528599 KLHL11Q9NVR0 708 aa12.6□□□□□ -0.39
TRAF3IP2-211ENST00000528599 AGO1Q9UL18 857 aaKnown RBP12.6□□□□□ -0.39
TRAF3IP2-211ENST00000528599 AP4E1Q9UPM8 1137 aa12.6□□□□□ -0.39
TRAF3IP2-211ENST00000528599 PCDHA3Q9Y5H8 950 aa12.6□□□□□ -0.39
TRAF3IP2-211ENST00000528599 ZFP37Q9Y6Q3 630 aaPredicted RBP12.6□□□□□ -0.39
TRAF3IP2-211ENST00000528599 UQCRHLA0A096LP55 91 aa12.59□□□□□ -0.39
TRAF3IP2-211ENST00000528599 GOLGA6L7A0A1B0GV03 622 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms