RNA–Protein interactions for RNA: ENST00000527825.1

CHD7-205, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 3

Gene CHD7, Length 434 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-205ENST00000527825 PANX2Q96RD6 677 aa4.34□□□□□ -1.71
CHD7-205ENST00000527825 BAG1Q99933 345 aaPredicted RBP4.34□□□□□ -1.71
CHD7-205ENST00000527825 SH2D3AQ9BRG2 576 aa4.34□□□□□ -1.71
CHD7-205ENST00000527825 LZTS2Q9BRK4 669 aa4.34□□□□□ -1.71
CHD7-205ENST00000527825 POLR3CQ9BUI4 534 aaPredicted RBP4.34□□□□□ -1.71
CHD7-205ENST00000527825 MIR1-1HGQ9H1L0 117 aa4.34□□□□□ -1.71
CHD7-205ENST00000527825 FAM204AQ9H8W3 233 aa4.34□□□□□ -1.71
CHD7-205ENST00000527825 ZFYVE1Q9HBF4 777 aa4.34□□□□□ -1.71
CHD7-205ENST00000527825 IFT122Q9HBG6 1241 aa4.34□□□□□ -1.71
CHD7-205ENST00000527825 FBRSL1Q9HCM7 1045 aaKnown RBP4.34□□□□□ -1.71
CHD7-205ENST00000527825 DISC1Q9NRI5 854 aa4.34□□□□□ -1.71
CHD7-205ENST00000527825 RBM28Q9NW13 759 aaKnown RBP4.34□□□□□ -1.71
CHD7-205ENST00000527825 FTSJ1Q9UET6 329 aa4.34□□□□□ -1.71
CHD7-205ENST00000527825 AFF4Q9UHB7 1163 aaKnown RBP4.34□□□□□ -1.71
CHD7-205ENST00000527825 MCM8Q9UJA3 840 aa4.34□□□□□ -1.71
CHD7-205ENST00000527825 GGA2Q9UJY4 613 aa4.34□□□□□ -1.71
CHD7-205ENST00000527825 MAFFQ9ULX9 164 aa4.34□□□□□ -1.71
CHD7-205ENST00000527825 HPCAL4Q9UM19 191 aa4.34□□□□□ -1.71
CHD7-205ENST00000527825 PCDHA7Q9UN72 937 aa4.34□□□□□ -1.71
CHD7-205ENST00000527825 MAN2B2Q9Y2E5 1009 aa4.34□□□□□ -1.71
CHD7-205ENST00000527825 YIPF1Q9Y548 306 aa4.34□□□□□ -1.71
CHD7-205ENST00000527825 TAF6LQ9Y6J9 622 aa4.34□□□□□ -1.71
CHD7-205ENST00000527825 ITIH6Q6UXX5 1313 aa4.34□□□□□ -1.71
CHD7-205ENST00000527825 MYO18AQ92614 2054 aaKnown RBP4.34□□□□□ -1.71
CHD7-205ENST00000527825 C2CD3Q4AC94 2353 aa4.34□□□□□ -1.72
CHD7-205ENST00000527825 SPTAN1Q13813 2472 aaKnown RBP4.34□□□□□ -1.72
CHD7-205ENST00000527825 CELSR3Q9NYQ7 3312 aa4.34□□□□□ -1.72
CHD7-205ENST00000527825 A0A1B0GTW7 788 aa4.33□□□□□ -1.72
CHD7-205ENST00000527825 TTC36A6NLP5 189 aa4.33□□□□□ -1.72
CHD7-205ENST00000527825 LRRIQ3A6PVS8 624 aaPredicted RBP4.33□□□□□ -1.72
CHD7-205ENST00000527825 KIAA1324LA8MWY0 1029 aaPredicted RBP4.33□□□□□ -1.72
CHD7-205ENST00000527825 H3BQV1 296 aa4.33□□□□□ -1.72
CHD7-205ENST00000527825 TMEM189-UBE2V1I3L0A0 370 aa4.33□□□□□ -1.72
CHD7-205ENST00000527825 I3L4J1 428 aa4.33□□□□□ -1.72
CHD7-205ENST00000527825 PPP1R12AO14974 1030 aaPredicted RBP4.33□□□□□ -1.72
CHD7-205ENST00000527825 EIF3HO15372 352 aaKnown RBP eCLIP4.33□□□□□ -1.722e-6■■■■□ 24.6
CHD7-205ENST00000527825 TSPAN1O60635 241 aa4.33□□□□□ -1.72
CHD7-205ENST00000527825 CILPO75339 1184 aa4.33□□□□□ -1.72
CHD7-205ENST00000527825 RFPL3O75679 317 aa4.33□□□□□ -1.72
CHD7-205ENST00000527825 MED26O95402 600 aa4.33□□□□□ -1.72
CHD7-205ENST00000527825 DLGAP3O95886 979 aa4.33□□□□□ -1.72
CHD7-205ENST00000527825 CCDC175P0C221 793 aa4.33□□□□□ -1.72
CHD7-205ENST00000527825 SFTPCP11686 197 aa4.33□□□□□ -1.72
CHD7-205ENST00000527825 CDK4P11802 303 aa4.33□□□□□ -1.72
CHD7-205ENST00000527825 ATP1A3P13637 1013 aa4.33□□□□□ -1.72
CHD7-205ENST00000527825 ARSAP15289 507 aa4.33□□□□□ -1.72
CHD7-205ENST00000527825 CMA1P23946 247 aa4.33□□□□□ -1.72
CHD7-205ENST00000527825 MAOBP27338 520 aa4.33□□□□□ -1.72
CHD7-205ENST00000527825 CDC25CP30307 473 aa4.33□□□□□ -1.72
CHD7-205ENST00000527825 HOXA11P31270 313 aaPredicted RBP4.33□□□□□ -1.72
CHD7-205ENST00000527825 HNRNPH1P31943 449 aaKnown RBP4.33□□□□□ -1.72
CHD7-205ENST00000527825 PBX1P40424 430 aa4.33□□□□□ -1.72
CHD7-205ENST00000527825 GRK6P43250 576 aa4.33□□□□□ -1.72
CHD7-205ENST00000527825 USP11P51784 963 aa4.33□□□□□ -1.72
CHD7-205ENST00000527825 NDUFA8P51970 172 aa4.33□□□□□ -1.72
CHD7-205ENST00000527825 NAPAP54920 295 aa4.33□□□□□ -1.72
CHD7-205ENST00000527825 UBASH3AP57075 661 aa4.33□□□□□ -1.72
CHD7-205ENST00000527825 VSNL1P62760 191 aa4.33□□□□□ -1.72
CHD7-205ENST00000527825 MRPS21P82921 87 aaKnown RBP4.33□□□□□ -1.72
CHD7-205ENST00000527825 CYP4F8P98187 520 aa4.33□□□□□ -1.72
CHD7-205ENST00000527825 NFKB2Q00653 900 aa4.33□□□□□ -1.72
CHD7-205ENST00000527825 TLE1Q04724 770 aa4.33□□□□□ -1.72
CHD7-205ENST00000527825 LAMTOR4Q0VGL1 99 aa4.33□□□□□ -1.72
CHD7-205ENST00000527825 TARDBPQ13148 414 aaKnown RBP eCLIP4.33□□□□□ -1.72
CHD7-205ENST00000527825 AP3B2Q13367 1082 aa4.33□□□□□ -1.72
CHD7-205ENST00000527825 TFDP1Q14186 410 aa4.33□□□□□ -1.72
CHD7-205ENST00000527825 VEPH1Q14D04 833 aa4.33□□□□□ -1.72
CHD7-205ENST00000527825 RTP5Q14D33 572 aa4.33□□□□□ -1.72
CHD7-205ENST00000527825 SF3A1Q15459 793 aaKnown RBP4.33□□□□□ -1.72
CHD7-205ENST00000527825 TARBP2Q15633 366 aaKnown RBP4.33□□□□□ -1.72
CHD7-205ENST00000527825 INF2Q27J81 1249 aa4.33□□□□□ -1.72
CHD7-205ENST00000527825 MAP9Q49MG5 647 aa4.33□□□□□ -1.72
CHD7-205ENST00000527825 HSP90B2PQ58FF3 399 aa4.33□□□□□ -1.72
CHD7-205ENST00000527825 EXOSC6Q5RKV6 272 aaKnown RBP4.33□□□□□ -1.72
CHD7-205ENST00000527825 WLSQ5T9L3 541 aa4.33□□□□□ -1.72
CHD7-205ENST00000527825 NT5DC1Q5TFE4 455 aa4.33□□□□□ -1.72
CHD7-205ENST00000527825 EMC10Q5UCC4 262 aa4.33□□□□□ -1.72
CHD7-205ENST00000527825 KIAA1614Q5VZ46 1190 aa4.33□□□□□ -1.72
CHD7-205ENST00000527825 SPECC1LQ69YQ0 1117 aa4.33□□□□□ -1.72
CHD7-205ENST00000527825 ANKRD34AQ69YU3 496 aa4.33□□□□□ -1.72
CHD7-205ENST00000527825 ZNF280DQ6N043 979 aa4.33□□□□□ -1.72
CHD7-205ENST00000527825 FDX2Q6P4F2 183 aa4.33□□□□□ -1.72
CHD7-205ENST00000527825 ZNF662Q6ZS27 426 aa4.33□□□□□ -1.72
CHD7-205ENST00000527825 MIER3Q7Z3K6 550 aa4.33□□□□□ -1.72
CHD7-205ENST00000527825 ITIH5Q86UX2 942 aa4.33□□□□□ -1.72
CHD7-205ENST00000527825 FAM26EQ8N5C1 309 aa4.33□□□□□ -1.72
CHD7-205ENST00000527825 TXNDC5Q8NBS9 432 aaKnown RBP4.33□□□□□ -1.72
CHD7-205ENST00000527825 RNF149Q8NC42 400 aa4.33□□□□□ -1.72
CHD7-205ENST00000527825 GSTCDQ8NEC7 633 aa4.33□□□□□ -1.72
CHD7-205ENST00000527825 BAHD1Q8TBE0 780 aaPredicted RBP4.33□□□□□ -1.72
CHD7-205ENST00000527825 MAGEC3Q8TD91 643 aa4.33□□□□□ -1.72
CHD7-205ENST00000527825 USP33Q8TEY7 942 aa4.33□□□□□ -1.72
CHD7-205ENST00000527825 TCP11Q8WWU5 503 aa4.33□□□□□ -1.72
CHD7-205ENST00000527825 PRPF31Q8WWY3 499 aaKnown RBP4.33□□□□□ -1.72
CHD7-205ENST00000527825 FAXDC2Q96IV6 333 aa4.33□□□□□ -1.72
CHD7-205ENST00000527825 UROC1Q96N76 676 aa4.33□□□□□ -1.72
CHD7-205ENST00000527825 LRRC3BQ96PB8 259 aa4.33□□□□□ -1.72
CHD7-205ENST00000527825 SH3GL2Q99962 352 aa4.33□□□□□ -1.72
CHD7-205ENST00000527825 KRTAP4-12Q9BQ66 201 aa4.33□□□□□ -1.72
CHD7-205ENST00000527825 TEKT3Q9BXF9 490 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms