RNA–Protein interactions for RNA: ENST00000527720.5

USH1C-207, Transcript of USH1 protein network component harmonin, humanhuman

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Gene USH1C, Length 2,278 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-207ENST00000527720 RAD54BQ9Y620 910 aa15.84■□□□□ 0.13
USH1C-207ENST00000527720 MAD1L1Q9Y6D9 718 aa15.84■□□□□ 0.13
USH1C-207ENST00000527720 PPP1R12AO14974 1030 aaPredicted RBP15.84■□□□□ 0.13
USH1C-207ENST00000527720 MFSD11O43934 449 aa15.84■□□□□ 0.13
USH1C-207ENST00000527720 HNRNPCL1O60812 293 aaKnown RBP15.84■□□□□ 0.13
USH1C-207ENST00000527720 MRPS6P82932 125 aaKnown RBP15.84■□□□□ 0.13
USH1C-207ENST00000527720 CCL14Q16627 93 aa15.84■□□□□ 0.13
USH1C-207ENST00000527720 WSCD1Q658N2 575 aa15.84■□□□□ 0.13
USH1C-207ENST00000527720 LRRC8BQ6P9F7 803 aa15.84■□□□□ 0.13
USH1C-207ENST00000527720 NLRP9Q7RTR0 991 aa15.84■□□□□ 0.13
USH1C-207ENST00000527720 LRRN4Q8WUT4 740 aa15.84■□□□□ 0.13
USH1C-207ENST00000527720 SOCS4Q8WXH5 440 aa15.84■□□□□ 0.13
USH1C-207ENST00000527720 NTAN1Q96AB6 310 aa15.84■□□□□ 0.13
USH1C-207ENST00000527720 THOC1Q96FV9 657 aaKnown RBP15.84■□□□□ 0.13
USH1C-207ENST00000527720 APBA2Q99767 749 aa15.84■□□□□ 0.13
USH1C-207ENST00000527720 NPHS2Q9NP85 383 aa15.84■□□□□ 0.13
USH1C-207ENST00000527720 SAR1AQ9NR31 198 aa15.84■□□□□ 0.13
USH1C-207ENST00000527720 SMYD2Q9NRG4 433 aa15.84■□□□□ 0.13
USH1C-207ENST00000527720 MOCS1Q9NZB8 636 aa15.84■□□□□ 0.13
USH1C-207ENST00000527720 BAIAP2L1Q9UHR4 511 aa15.84■□□□□ 0.13
USH1C-207ENST00000527720 PLLPQ9Y342 182 aa15.84■□□□□ 0.13
USH1C-207ENST00000527720 C9IYK1 514 aa15.83■□□□□ 0.13
USH1C-207ENST00000527720 M0QYT0 321 aa15.83■□□□□ 0.13
USH1C-207ENST00000527720 CLDN5O00501 218 aa15.83■□□□□ 0.13
USH1C-207ENST00000527720 BEST1O76090 585 aa15.83■□□□□ 0.13
USH1C-207ENST00000527720 ALDH1A2O94788 518 aa15.83■□□□□ 0.13
USH1C-207ENST00000527720 KRT16P08779 473 aa15.83■□□□□ 0.13
USH1C-207ENST00000527720 SERPINB4P48594 390 aa15.83■□□□□ 0.13
USH1C-207ENST00000527720 GJA9P57773 515 aa15.83■□□□□ 0.13
USH1C-207ENST00000527720 GPR162Q16538 588 aa15.83■□□□□ 0.13
USH1C-207ENST00000527720 NBPF20Q3BBV1 942 aa15.83■□□□□ 0.13
USH1C-207ENST00000527720 MDH1BQ5I0G3 518 aa15.83■□□□□ 0.13
USH1C-207ENST00000527720 COLGALT1Q8NBJ5 622 aa15.83■□□□□ 0.13
USH1C-207ENST00000527720 TMEM237Q96Q45 408 aa15.83■□□□□ 0.13
USH1C-207ENST00000527720 NAT9Q9BTE0 207 aa15.83■□□□□ 0.13
USH1C-207ENST00000527720 MED10Q9BTT4 135 aa15.83■□□□□ 0.13
USH1C-207ENST00000527720 CHST12Q9NRB3 414 aa15.83■□□□□ 0.13
USH1C-207ENST00000527720 DDX43Q9NXZ2 648 aaKnown RBP15.83■□□□□ 0.13
USH1C-207ENST00000527720 RFPL1O75677 317 aa15.83■□□□□ 0.12
USH1C-207ENST00000527720 TKTL1P51854 596 aa15.83■□□□□ 0.12
USH1C-207ENST00000527720 GTF2A1P52655 376 aaPredicted RBP15.83■□□□□ 0.12
USH1C-207ENST00000527720 DEUP1Q05D60 604 aa15.83■□□□□ 0.12
USH1C-207ENST00000527720 SCAPQ12770 1279 aa15.83■□□□□ 0.12
USH1C-207ENST00000527720 NAB1Q13506 487 aa15.83■□□□□ 0.12
USH1C-207ENST00000527720 DPYSQ14117 519 aa15.83■□□□□ 0.12
USH1C-207ENST00000527720 TAF1CQ15572 869 aaPredicted RBP15.83■□□□□ 0.12
USH1C-207ENST00000527720 TIFABQ6ZNK6 161 aa15.83■□□□□ 0.12
USH1C-207ENST00000527720 DENND5BQ6ZUT9 1274 aa15.83■□□□□ 0.12
USH1C-207ENST00000527720 PDZD4Q76G19 769 aaPredicted RBP15.83■□□□□ 0.12
USH1C-207ENST00000527720 PTPRN2Q92932 1015 aa15.83■□□□□ 0.12
USH1C-207ENST00000527720 TTC17Q96AE7 1141 aa15.83■□□□□ 0.12
USH1C-207ENST00000527720 STAMBPL1Q96FJ0 436 aa15.83■□□□□ 0.12
USH1C-207ENST00000527720 SENP8Q96LD8 212 aa15.83■□□□□ 0.12
USH1C-207ENST00000527720 C12orf65Q9H3J6 166 aaKnown RBP15.83■□□□□ 0.12
USH1C-207ENST00000527720 CNGB3Q9NQW8 809 aa15.83■□□□□ 0.12
USH1C-207ENST00000527720 RRN3Q9NYV6 651 aa15.83■□□□□ 0.12
USH1C-207ENST00000527720 TRPV2Q9Y5S1 764 aa15.83■□□□□ 0.12
USH1C-207ENST00000527720 MANSC4A6NHS7 340 aaPredicted RBP15.82■□□□□ 0.12
USH1C-207ENST00000527720 SDR42E2A6NKP2 422 aa15.82■□□□□ 0.12
USH1C-207ENST00000527720 CSH1P0DML2 217 aa15.82■□□□□ 0.12
USH1C-207ENST00000527720 CSH2P0DML3 217 aa15.82■□□□□ 0.12
USH1C-207ENST00000527720 AKR1A1P14550 325 aa15.82■□□□□ 0.12
USH1C-207ENST00000527720 CYP2B6P20813 491 aa15.82■□□□□ 0.12
USH1C-207ENST00000527720 ACAT1P24752 427 aaKnown RBP15.82■□□□□ 0.12
USH1C-207ENST00000527720 WLSQ5T9L3 541 aa15.82■□□□□ 0.12
USH1C-207ENST00000527720 RSPH3Q86UC2 560 aa15.82■□□□□ 0.12
USH1C-207ENST00000527720 MPP5Q8N3R9 675 aa15.82■□□□□ 0.12
USH1C-207ENST00000527720 RAB3IL1Q8TBN0 382 aa15.82■□□□□ 0.12
USH1C-207ENST00000527720 NDRG1Q92597 394 aaKnown RBP15.82■□□□□ 0.12
USH1C-207ENST00000527720 PGAP3Q96FM1 320 aaPredicted RBP15.82■□□□□ 0.12
USH1C-207ENST00000527720 P2RY11Q96G91 374 aa15.82■□□□□ 0.12
USH1C-207ENST00000527720 ZFP42Q96MM3 310 aa15.82■□□□□ 0.12
USH1C-207ENST00000527720 LGMNQ99538 433 aa15.82■□□□□ 0.12
USH1C-207ENST00000527720 TUBB6Q9BUF5 446 aa15.82■□□□□ 0.12
USH1C-207ENST00000527720 KRT82Q9NSB4 513 aa15.82■□□□□ 0.12
USH1C-207ENST00000527720 FAM105AQ9NUU6 356 aa15.82■□□□□ 0.12
USH1C-207ENST00000527720 ZFP69BQ9UJL9 534 aa15.82■□□□□ 0.12
USH1C-207ENST00000527720 MFHAS1Q9Y4C4 1052 aa15.82■□□□□ 0.12
USH1C-207ENST00000527720 PTCH2Q9Y6C5 1203 aa15.82■□□□□ 0.12
USH1C-207ENST00000527720 RNF103O00237 685 aa15.82■□□□□ 0.12
USH1C-207ENST00000527720 EEF2KO00418 725 aaKnown RBP15.82■□□□□ 0.12
USH1C-207ENST00000527720 TRAFD1O14545 582 aaPredicted RBP15.82■□□□□ 0.12
USH1C-207ENST00000527720 HGSO14964 777 aaPredicted RBP15.82■□□□□ 0.12
USH1C-207ENST00000527720 THP07101 528 aa15.82■□□□□ 0.12
USH1C-207ENST00000527720 NEFHP12036 1026 aa15.82■□□□□ 0.12
USH1C-207ENST00000527720 HCAR3P49019 387 aa15.82■□□□□ 0.12
USH1C-207ENST00000527720 ZNF135P52742 658 aaPredicted RBP15.82■□□□□ 0.12
USH1C-207ENST00000527720 MAP3K7CLP57077 242 aa15.82■□□□□ 0.12
USH1C-207ENST00000527720 DAOAP59103 153 aa15.82■□□□□ 0.12
USH1C-207ENST00000527720 AP1B1Q10567 949 aa15.82■□□□□ 0.12
USH1C-207ENST00000527720 RAB41Q5JT25 222 aa15.82■□□□□ 0.12
USH1C-207ENST00000527720 KIAA0319Q5VV43 1072 aa15.82■□□□□ 0.12
USH1C-207ENST00000527720 C17orf99Q6UX52 265 aa15.82■□□□□ 0.12
USH1C-207ENST00000527720 MARK2Q7KZI7 788 aaKnown RBP15.82■□□□□ 0.12
USH1C-207ENST00000527720 KIF2BQ8N4N8 673 aa15.82■□□□□ 0.12
USH1C-207ENST00000527720 DEPDC1BQ8WUY9 529 aa15.82■□□□□ 0.12
USH1C-207ENST00000527720 OXNAD1Q96HP4 312 aaPredicted RBP15.82■□□□□ 0.12
USH1C-207ENST00000527720 SYT15Q9BQS2 421 aa15.82■□□□□ 0.12
USH1C-207ENST00000527720 CRTAC1Q9NQ79 661 aa15.82■□□□□ 0.12
USH1C-207ENST00000527720 IGSF9Q9P2J2 1179 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms