RNA–Protein interactions for RNA: ENST00000527323.5

CAPN1-208, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-208ENST00000527323 AFG1LQ8WV93 481 aa12.91□□□□□ -0.34
CAPN1-208ENST00000527323 USP6NLQ92738 828 aa12.91□□□□□ -0.34
CAPN1-208ENST00000527323 RNF157Q96PX1 679 aa12.91□□□□□ -0.34
CAPN1-208ENST00000527323 S100A14Q9HCY8 104 aa12.91□□□□□ -0.34
CAPN1-208ENST00000527323 MAFBQ9Y5Q3 323 aaPredicted RBP12.91□□□□□ -0.34
CAPN1-208ENST00000527323 A0A088AWK7 358 aa12.9□□□□□ -0.34
CAPN1-208ENST00000527323 ANKRD33BA6NCL7 494 aa12.9□□□□□ -0.34
CAPN1-208ENST00000527323 F5H423 210 aaPredicted RBP12.9□□□□□ -0.34
CAPN1-208ENST00000527323 APOL1O14791 398 aa12.9□□□□□ -0.34
CAPN1-208ENST00000527323 RNASEH1O60930 286 aaKnown RBP12.9□□□□□ -0.34
CAPN1-208ENST00000527323 NCF2P19878 526 aaPredicted RBP12.9□□□□□ -0.34
CAPN1-208ENST00000527323 GPD1P21695 349 aa12.9□□□□□ -0.34
CAPN1-208ENST00000527323 WASHC5Q12768 1159 aa12.9□□□□□ -0.34
CAPN1-208ENST00000527323 TEX44Q53QW1 395 aa12.9□□□□□ -0.34
CAPN1-208ENST00000527323 PPP6R3Q5H9R7 873 aaPredicted RBP12.9□□□□□ -0.34
CAPN1-208ENST00000527323 PLD5Q8N7P1 536 aa12.9□□□□□ -0.34
CAPN1-208ENST00000527323 RNF149Q8NC42 400 aa12.9□□□□□ -0.34
CAPN1-208ENST00000527323 OR6Y1Q8NGX8 325 aa12.9□□□□□ -0.34
CAPN1-208ENST00000527323 FRMD8Q9BZ67 464 aaPredicted RBP12.9□□□□□ -0.34
CAPN1-208ENST00000527323 VCX3BQ9H321 246 aa12.9□□□□□ -0.34
CAPN1-208ENST00000527323 RNPEPQ9H4A4 650 aa12.9□□□□□ -0.34
CAPN1-208ENST00000527323 VCX3AQ9NNX9 186 aa12.9□□□□□ -0.34
CAPN1-208ENST00000527323 SLC15A5A6NIM6 579 aa12.9□□□□□ -0.34
CAPN1-208ENST00000527323 MICAL2O94851 1124 aa12.9□□□□□ -0.34
CAPN1-208ENST00000527323 PRKCBP05771 671 aa12.9□□□□□ -0.34
CAPN1-208ENST00000527323 PRKCHP24723 683 aa12.9□□□□□ -0.34
CAPN1-208ENST00000527323 CRHR1P34998 444 aa12.9□□□□□ -0.34
CAPN1-208ENST00000527323 LAMB3Q13751 1172 aa12.9□□□□□ -0.34
CAPN1-208ENST00000527323 LIN52Q52LA3 116 aa12.9□□□□□ -0.34
CAPN1-208ENST00000527323 EFCAB3Q8N7B9 438 aa12.9□□□□□ -0.34
CAPN1-208ENST00000527323 CNPY3Q9BT09 278 aa12.9□□□□□ -0.34
CAPN1-208ENST00000527323 XYLT2Q9H1B5 865 aa12.9□□□□□ -0.34
CAPN1-208ENST00000527323 DNAJB4Q9UDY4 337 aa12.9□□□□□ -0.34
CAPN1-208ENST00000527323 LCTP09848 1927 aa12.9□□□□□ -0.34
CAPN1-208ENST00000527323 SDR42E2A6NKP2 422 aa12.9□□□□□ -0.35
CAPN1-208ENST00000527323 DYNC1LI2O43237 492 aaPredicted RBP12.9□□□□□ -0.35
CAPN1-208ENST00000527323 ITM2AO43736 263 aa12.9□□□□□ -0.35
CAPN1-208ENST00000527323 KLHL2O95198 593 aa12.9□□□□□ -0.35
CAPN1-208ENST00000527323 PROCP04070 461 aa12.9□□□□□ -0.35
CAPN1-208ENST00000527323 ETS2P15036 469 aa12.9□□□□□ -0.35
CAPN1-208ENST00000527323 EFNA5P52803 228 aa12.9□□□□□ -0.35
CAPN1-208ENST00000527323 COPAP53621 1224 aa12.9□□□□□ -0.35
CAPN1-208ENST00000527323 PTPN11Q06124 597 aaPredicted RBP12.9□□□□□ -0.35
CAPN1-208ENST00000527323 DHDDSQ86SQ9 333 aa12.9□□□□□ -0.35
CAPN1-208ENST00000527323 ZBTB8OSQ8IWT0 167 aa12.9□□□□□ -0.35
CAPN1-208ENST00000527323 SLC4A11Q8NBS3 891 aa12.9□□□□□ -0.35
CAPN1-208ENST00000527323 PIWIL2Q8TC59 973 aaKnown RBP12.9□□□□□ -0.35
CAPN1-208ENST00000527323 PPP4R1Q8TF05 950 aa12.9□□□□□ -0.35
CAPN1-208ENST00000527323 ACO2Q99798 780 aaKnown RBP12.9□□□□□ -0.35
CAPN1-208ENST00000527323 SPATA16Q9BXB7 569 aa12.9□□□□□ -0.35
CAPN1-208ENST00000527323 DMAP1Q9NPF5 467 aaPredicted RBP12.9□□□□□ -0.35
CAPN1-208ENST00000527323 CDK7P50613 346 aa12.89□□□□□ -0.35
CAPN1-208ENST00000527323 ZNF143P52747 638 aaPredicted RBP12.89□□□□□ -0.35
CAPN1-208ENST00000527323 ACAP1Q15027 740 aa12.89□□□□□ -0.35
CAPN1-208ENST00000527323 KYAT3Q6YP21 454 aaKnown RBP12.89□□□□□ -0.35
CAPN1-208ENST00000527323 MPP5Q8N3R9 675 aa12.89□□□□□ -0.35
CAPN1-208ENST00000527323 GSDMBQ8TAX9 411 aa12.89□□□□□ -0.35
CAPN1-208ENST00000527323 TWNKQ96RR1 684 aa12.89□□□□□ -0.35
CAPN1-208ENST00000527323 SDCBP2Q9H190 292 aa12.89□□□□□ -0.35
CAPN1-208ENST00000527323 C1orf21Q9H246 121 aa12.89□□□□□ -0.35
CAPN1-208ENST00000527323 EVPLQ92817 2033 aa12.89□□□□□ -0.35
CAPN1-208ENST00000527323 UNC80Q8N2C7 3258 aa12.89□□□□□ -0.35
CAPN1-208ENST00000527323 INO80B-WBP1J3KQ70 363 aa12.89□□□□□ -0.35
CAPN1-208ENST00000527323 BIRC5O15392 142 aa12.89□□□□□ -0.35
CAPN1-208ENST00000527323 MSCO60682 206 aa12.89□□□□□ -0.35
CAPN1-208ENST00000527323 SNNO75324 88 aaPredicted RBP12.89□□□□□ -0.35
CAPN1-208ENST00000527323 SNAI1O95863 264 aaPredicted RBP12.89□□□□□ -0.35
CAPN1-208ENST00000527323 C1QAP02745 245 aa12.89□□□□□ -0.35
CAPN1-208ENST00000527323 HOXC6P09630 235 aa12.89□□□□□ -0.35
CAPN1-208ENST00000527323 CCNFP41002 786 aa12.89□□□□□ -0.35
CAPN1-208ENST00000527323 SLC1A6P48664 564 aa12.89□□□□□ -0.35
CAPN1-208ENST00000527323 STAT5BP51692 787 aa12.89□□□□□ -0.35
CAPN1-208ENST00000527323 TRIP10Q15642 601 aa12.89□□□□□ -0.35
CAPN1-208ENST00000527323 MMEL1Q495T6 779 aa12.89□□□□□ -0.35
CAPN1-208ENST00000527323 AAGABQ6PD74 315 aa12.89□□□□□ -0.35
CAPN1-208ENST00000527323 SESTD1Q86VW0 696 aa12.89□□□□□ -0.35
CAPN1-208ENST00000527323 ADGRF2Q8IZF7 708 aa12.89□□□□□ -0.35
CAPN1-208ENST00000527323 GDPD5Q8WTR4 605 aa12.89□□□□□ -0.35
CAPN1-208ENST00000527323 FAM172AQ8WUF8 416 aa12.89□□□□□ -0.35
CAPN1-208ENST00000527323 INO80BQ9C086 356 aaPredicted RBP12.89□□□□□ -0.35
CAPN1-208ENST00000527323 HMGXB4Q9UGU5 601 aa12.89□□□□□ -0.35
CAPN1-208ENST00000527323 CPSF3Q9UKF6 684 aaKnown RBP12.89□□□□□ -0.35
CAPN1-208ENST00000527323 KIAA0100Q14667 2235 aaKnown RBP12.89□□□□□ -0.35
CAPN1-208ENST00000527323 SORBS2O94875 1100 aaKnown RBP12.88□□□□□ -0.35
CAPN1-208ENST00000527323 AOC1P19801 751 aa12.88□□□□□ -0.35
CAPN1-208ENST00000527323 RGS7P49802 495 aa12.88□□□□□ -0.35
CAPN1-208ENST00000527323 SERPINB9P50453 376 aa12.88□□□□□ -0.35
CAPN1-208ENST00000527323 CLCN3P51790 818 aa12.88□□□□□ -0.35
CAPN1-208ENST00000527323 GRAMD1BQ3KR37 738 aa12.88□□□□□ -0.35
CAPN1-208ENST00000527323 SFT2D3Q587I9 215 aa12.88□□□□□ -0.35
CAPN1-208ENST00000527323 N4BP2L1Q5TBK1 243 aaPredicted RBP12.88□□□□□ -0.35
CAPN1-208ENST00000527323 BSPRYQ5W0U4 402 aa12.88□□□□□ -0.35
CAPN1-208ENST00000527323 MARK2Q7KZI7 788 aaKnown RBP12.88□□□□□ -0.35
CAPN1-208ENST00000527323 ARCQ7LC44 396 aa12.88□□□□□ -0.35
CAPN1-208ENST00000527323 EGFL6Q8IUX8 553 aa12.88□□□□□ -0.35
CAPN1-208ENST00000527323 APBB2Q92870 758 aa12.88□□□□□ -0.35
CAPN1-208ENST00000527323 ATP2A3Q93084 1043 aa12.88□□□□□ -0.35
CAPN1-208ENST00000527323 MCRS1Q96EZ8 462 aa12.88□□□□□ -0.35
CAPN1-208ENST00000527323 OLFM3Q96PB7 478 aa12.88□□□□□ -0.35
CAPN1-208ENST00000527323 EBNA1BP2Q99848 306 aaKnown RBP12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms