RNA–Protein interactions for RNA: ENST00000527253.2

PRPF40B-204, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 742 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-204ENST00000527253 C11orf74Q86VG3 221 aa10.88□□□□□ -0.67
PRPF40B-204ENST00000527253 DEFB119Q8N690 84 aa10.88□□□□□ -0.67
PRPF40B-204ENST00000527253 C12orf50Q8NA57 414 aaPredicted RBP10.88□□□□□ -0.67
PRPF40B-204ENST00000527253 DQX1Q8TE96 717 aaKnown RBP10.88□□□□□ -0.67
PRPF40B-204ENST00000527253 FCRL2Q96LA5 508 aaPredicted RBP10.88□□□□□ -0.67
PRPF40B-204ENST00000527253 LMBRD1Q9NUN5 540 aa10.88□□□□□ -0.67
PRPF40B-204ENST00000527253 TMEM74BQ9NUR3 256 aa10.88□□□□□ -0.67
PRPF40B-204ENST00000527253 ELOVL2Q9NXB9 296 aa10.88□□□□□ -0.67
PRPF40B-204ENST00000527253 PLXND1Q9Y4D7 1925 aa10.88□□□□□ -0.67
PRPF40B-204ENST00000527253 TNRC6BQ9UPQ9 1833 aaKnown RBP10.87□□□□□ -0.67
PRPF40B-204ENST00000527253 IGHV1OR15-9A0A0B4J2B8 117 aa10.87□□□□□ -0.67
PRPF40B-204ENST00000527253 GTPBP10A4D1E9 387 aaKnown RBP10.87□□□□□ -0.67
PRPF40B-204ENST00000527253 MAP3K13O43283 966 aa10.87□□□□□ -0.67
PRPF40B-204ENST00000527253 THAP12O43422 761 aa10.87□□□□□ -0.67
PRPF40B-204ENST00000527253 FOXD2O60548 495 aaPredicted RBP10.87□□□□□ -0.67
PRPF40B-204ENST00000527253 LATS1O95835 1130 aa10.87□□□□□ -0.67
PRPF40B-204ENST00000527253 CYBBP04839 570 aa10.87□□□□□ -0.67
PRPF40B-204ENST00000527253 PNMA6AP0CW24 399 aaPredicted RBP10.87□□□□□ -0.67
PRPF40B-204ENST00000527253 PRKCHP24723 683 aa10.87□□□□□ -0.67
PRPF40B-204ENST00000527253 HLA-FP30511 346 aa10.87□□□□□ -0.67
PRPF40B-204ENST00000527253 GNA15P30679 374 aa10.87□□□□□ -0.67
PRPF40B-204ENST00000527253 MTIF2P46199 727 aaKnown RBP10.87□□□□□ -0.67
PRPF40B-204ENST00000527253 TBX4P57082 545 aa10.87□□□□□ -0.67
PRPF40B-204ENST00000527253 PITX1P78337 314 aaPredicted RBP10.87□□□□□ -0.67
PRPF40B-204ENST00000527253 IRX4P78413 519 aa10.87□□□□□ -0.67
PRPF40B-204ENST00000527253 ZNF234Q14588 700 aa10.87□□□□□ -0.67
PRPF40B-204ENST00000527253 TAF5Q15542 800 aa10.87□□□□□ -0.67
PRPF40B-204ENST00000527253 EXOC3L4Q17RC7 722 aa10.87□□□□□ -0.67
PRPF40B-204ENST00000527253 FUT11Q495W5 492 aa10.87□□□□□ -0.67
PRPF40B-204ENST00000527253 HSP90AA4PQ58FG1 418 aa10.87□□□□□ -0.67
PRPF40B-204ENST00000527253 FAM133BQ5BKY9 247 aaKnown RBP10.87□□□□□ -0.67
PRPF40B-204ENST00000527253 MIIPQ5JXC2 388 aa10.87□□□□□ -0.67
PRPF40B-204ENST00000527253 PIK3R6Q5UE93 754 aa10.87□□□□□ -0.67
PRPF40B-204ENST00000527253 RNF43Q68DV7 783 aa10.87□□□□□ -0.67
PRPF40B-204ENST00000527253 SDE2Q6IQ49 451 aa10.87□□□□□ -0.67
PRPF40B-204ENST00000527253 GBP6Q6ZN66 633 aa10.87□□□□□ -0.67
PRPF40B-204ENST00000527253 LPCAT2Q7L5N7 544 aa10.87□□□□□ -0.67
PRPF40B-204ENST00000527253 ENOSF1Q7L5Y1 443 aa10.87□□□□□ -0.67
PRPF40B-204ENST00000527253 CYP2U1Q7Z449 544 aa10.87□□□□□ -0.67
PRPF40B-204ENST00000527253 KIAA0907Q7Z7F0 614 aaPredicted RBP10.87□□□□□ -0.67
PRPF40B-204ENST00000527253 TMEM110Q86TL2 294 aa10.87□□□□□ -0.67
PRPF40B-204ENST00000527253 ADAM32Q8TC27 787 aa10.87□□□□□ -0.67
PRPF40B-204ENST00000527253 WFDC5Q8TCV5 224 aa10.87□□□□□ -0.67
PRPF40B-204ENST00000527253 STK32AQ8WU08 396 aa10.87□□□□□ -0.67
PRPF40B-204ENST00000527253 SHC3Q92529 594 aa10.87□□□□□ -0.67
PRPF40B-204ENST00000527253 PIGKQ92643 395 aa10.87□□□□□ -0.67
PRPF40B-204ENST00000527253 TMA16Q96EY4 203 aaKnown RBP10.87□□□□□ -0.67
PRPF40B-204ENST00000527253 SLC39A13Q96H72 371 aa10.87□□□□□ -0.67
PRPF40B-204ENST00000527253 LMLNQ96KR4 655 aa10.87□□□□□ -0.67
PRPF40B-204ENST00000527253 MRGPRX1Q96LB2 322 aa10.87□□□□□ -0.67
PRPF40B-204ENST00000527253 SLC2A11Q9BYW1 496 aa10.87□□□□□ -0.67
PRPF40B-204ENST00000527253 THAP9Q9H5L6 903 aa10.87□□□□□ -0.67
PRPF40B-204ENST00000527253 ST7Q9NRC1 585 aa10.87□□□□□ -0.67
PRPF40B-204ENST00000527253 APEX2Q9UBZ4 518 aa10.87□□□□□ -0.67
PRPF40B-204ENST00000527253 XPO7Q9UIA9 1087 aaKnown RBP10.87□□□□□ -0.67
PRPF40B-204ENST00000527253 PI4KAP42356 2102 aa10.87□□□□□ -0.67
PRPF40B-204ENST00000527253 LNP1A1A4G5 178 aa10.86□□□□□ -0.67
PRPF40B-204ENST00000527253 E5RJQ4 531 aa10.86□□□□□ -0.67
PRPF40B-204ENST00000527253 FOXN3O00409 490 aaPredicted RBP10.86□□□□□ -0.67
PRPF40B-204ENST00000527253 CDX4O14627 284 aaPredicted RBP10.86□□□□□ -0.67
PRPF40B-204ENST00000527253 ACSL4O60488 711 aa10.86□□□□□ -0.67
PRPF40B-204ENST00000527253 NCAM1P13591 858 aa10.86□□□□□ -0.67
PRPF40B-204ENST00000527253 ITPKAP23677 461 aa10.86□□□□□ -0.67
PRPF40B-204ENST00000527253 ERCC5P28715 1186 aaPredicted RBP10.86□□□□□ -0.67
PRPF40B-204ENST00000527253 CD70P32970 193 aa10.86□□□□□ -0.67
PRPF40B-204ENST00000527253 CLCN1P35523 988 aa10.86□□□□□ -0.67
PRPF40B-204ENST00000527253 USP8P40818 1118 aa10.86□□□□□ -0.67
PRPF40B-204ENST00000527253 RING1Q06587 406 aa10.86□□□□□ -0.67
PRPF40B-204ENST00000527253 KCNMA1Q12791 1236 aa10.86□□□□□ -0.67
PRPF40B-204ENST00000527253 MEA1Q16626 185 aa10.86□□□□□ -0.67
PRPF40B-204ENST00000527253 MAN2A1Q16706 1144 aa10.86□□□□□ -0.67
PRPF40B-204ENST00000527253 PPM1JQ5JR12 505 aa10.86□□□□□ -0.67
PRPF40B-204ENST00000527253 ANKS1BQ7Z6G8 1248 aa10.86□□□□□ -0.67
PRPF40B-204ENST00000527253 TAC4Q86UU9 113 aa10.86□□□□□ -0.67
PRPF40B-204ENST00000527253 ADIPOR2Q86V24 386 aa10.86□□□□□ -0.67
PRPF40B-204ENST00000527253 SLC41A1Q8IVJ1 513 aa10.86□□□□□ -0.67
PRPF40B-204ENST00000527253 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.86□□□□□ -0.67
PRPF40B-204ENST00000527253 SPACA7Q96KW9 195 aa10.86□□□□□ -0.67
PRPF40B-204ENST00000527253 PRICKLE1Q96MT3 831 aaPredicted RBP10.86□□□□□ -0.67
PRPF40B-204ENST00000527253 MKRN2Q9H000 416 aaKnown RBP10.86□□□□□ -0.67
PRPF40B-204ENST00000527253 SAMSN1Q9NSI8 373 aaKnown RBP10.86□□□□□ -0.67
PRPF40B-204ENST00000527253 DNAJC12Q9UKB3 198 aa10.86□□□□□ -0.67
PRPF40B-204ENST00000527253 CYP8B1Q9UNU6 501 aa10.86□□□□□ -0.67
PRPF40B-204ENST00000527253 ATXN2Q99700 1313 aaKnown RBP10.85□□□□□ -0.67
PRPF40B-204ENST00000527253 C4orf47A7E2U8 309 aa10.85□□□□□ -0.67
PRPF40B-204ENST00000527253 KCNJ18B7U540 433 aa10.85□□□□□ -0.67
PRPF40B-204ENST00000527253 KHNYNO15037 678 aaKnown RBP10.85□□□□□ -0.67
PRPF40B-204ENST00000527253 MED7O43513 233 aa10.85□□□□□ -0.67
PRPF40B-204ENST00000527253 TBL1XO60907 577 aa10.85□□□□□ -0.67
PRPF40B-204ENST00000527253 HLA-EP13747 358 aa10.85□□□□□ -0.67
PRPF40B-204ENST00000527253 ACADSBP45954 432 aa10.85□□□□□ -0.67
PRPF40B-204ENST00000527253 COPAP53621 1224 aa10.85□□□□□ -0.67
PRPF40B-204ENST00000527253 RPL6Q02878 288 aaKnown RBP10.85□□□□□ -0.67
PRPF40B-204ENST00000527253 PDCLQ13371 301 aa10.85□□□□□ -0.67
PRPF40B-204ENST00000527253 EIF4EBP2Q13542 120 aaPredicted RBP10.85□□□□□ -0.67
PRPF40B-204ENST00000527253 BYSLQ13895 437 aaKnown RBP10.85□□□□□ -0.67
PRPF40B-204ENST00000527253 PTPRNQ16849 979 aa10.85□□□□□ -0.67
PRPF40B-204ENST00000527253 VWA3BQ502W6 1294 aa10.85□□□□□ -0.67
PRPF40B-204ENST00000527253 LYSMD4Q5XG99 296 aa10.85□□□□□ -0.67
PRPF40B-204ENST00000527253 NUGGCQ68CJ6 796 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms