RNA–Protein interactions for RNA: ENST00000527154.5

CHMP4A-203, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 571 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-203ENST00000527154 CACUL1Q86Y37 369 aa17.05■□□□□ 0.32
CHMP4A-203ENST00000527154 LURAP1LQ8IV03 231 aa17.05■□□□□ 0.32
CHMP4A-203ENST00000527154 FMNL3Q8IVF7 1028 aa17.05■□□□□ 0.32
CHMP4A-203ENST00000527154 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.05■□□□□ 0.32
CHMP4A-203ENST00000527154 SLC2A14Q8TDB8 520 aa17.05■□□□□ 0.32
CHMP4A-203ENST00000527154 NOC3LQ8WTT2 800 aaKnown RBP17.05■□□□□ 0.32
CHMP4A-203ENST00000527154 MED10Q9BTT4 135 aa17.05■□□□□ 0.32
CHMP4A-203ENST00000527154 ACE2Q9BYF1 805 aaPredicted RBP17.05■□□□□ 0.32
CHMP4A-203ENST00000527154 EBF2Q9HAK2 575 aa17.05■□□□□ 0.32
CHMP4A-203ENST00000527154 PANK4Q9NVE7 773 aa17.05■□□□□ 0.32
CHMP4A-203ENST00000527154 AGO1Q9UL18 857 aaKnown RBP17.05■□□□□ 0.32
CHMP4A-203ENST00000527154 USP3Q9Y6I4 520 aa17.05■□□□□ 0.32
CHMP4A-203ENST00000527154 A0A1W2PQH9 124 aa17.04■□□□□ 0.32
CHMP4A-203ENST00000527154 A0A1W2PR77 199 aa17.04■□□□□ 0.32
CHMP4A-203ENST00000527154 EIF3DO15371 548 aaKnown RBP eCLIP17.04■□□□□ 0.32
CHMP4A-203ENST00000527154 DXOO77932 396 aaKnown RBP17.04■□□□□ 0.32
CHMP4A-203ENST00000527154 C6P13671 934 aa17.04■□□□□ 0.32
CHMP4A-203ENST00000527154 CCDC130P13994 396 aa17.04■□□□□ 0.32
CHMP4A-203ENST00000527154 IDEP14735 1019 aa17.04■□□□□ 0.32
CHMP4A-203ENST00000527154 EPHA8P29322 1005 aaPredicted RBP17.04■□□□□ 0.32
CHMP4A-203ENST00000527154 RXRGP48443 463 aa17.04■□□□□ 0.32
CHMP4A-203ENST00000527154 MAP3K7CLP57077 242 aa17.04■□□□□ 0.32
CHMP4A-203ENST00000527154 KIAA0895LQ68EN5 471 aa17.04■□□□□ 0.32
CHMP4A-203ENST00000527154 USP30Q70CQ3 517 aa17.04■□□□□ 0.32
CHMP4A-203ENST00000527154 CCDC186Q7Z3E2 898 aa17.04■□□□□ 0.32
CHMP4A-203ENST00000527154 PRSS16Q9NQE7 514 aa17.04■□□□□ 0.32
CHMP4A-203ENST00000527154 AGPAT3Q9NRZ7 376 aa17.04■□□□□ 0.32
CHMP4A-203ENST00000527154 CCDC39Q9UFE4 941 aa17.04■□□□□ 0.32
CHMP4A-203ENST00000527154 FBXO2Q9UK22 296 aaPredicted RBP17.04■□□□□ 0.32
CHMP4A-203ENST00000527154 NUDT5Q9UKK9 219 aa17.04■□□□□ 0.32
CHMP4A-203ENST00000527154 COL12A1Q99715 3063 aa17.03■□□□□ 0.32
CHMP4A-203ENST00000527154 TP53BP1Q12888 1972 aaPredicted RBP17.03■□□□□ 0.32
CHMP4A-203ENST00000527154 HLA-FP30511 346 aa17.03■□□□□ 0.32
CHMP4A-203ENST00000527154 KIF11P52732 1056 aa17.03■□□□□ 0.32
CHMP4A-203ENST00000527154 UCNP55089 124 aa17.03■□□□□ 0.32
CHMP4A-203ENST00000527154 COG7P83436 770 aa17.03■□□□□ 0.32
CHMP4A-203ENST00000527154 INSM1Q01101 510 aaPredicted RBP17.03■□□□□ 0.32
CHMP4A-203ENST00000527154 KCNC4Q03721 635 aa17.03■□□□□ 0.32
CHMP4A-203ENST00000527154 CCDC173Q0VFZ6 552 aa17.03■□□□□ 0.32
CHMP4A-203ENST00000527154 RRAGBQ5VZM2 374 aa17.03■□□□□ 0.32
CHMP4A-203ENST00000527154 ACOT1Q86TX2 421 aa17.03■□□□□ 0.32
CHMP4A-203ENST00000527154 UNC93AQ86WB7 457 aa17.03■□□□□ 0.32
CHMP4A-203ENST00000527154 FAM181AQ8N9Y4 354 aa17.03■□□□□ 0.32
CHMP4A-203ENST00000527154 ZNF248Q8NDW4 579 aa17.03■□□□□ 0.32
CHMP4A-203ENST00000527154 ZNF507Q8TCN5 953 aa17.03■□□□□ 0.32
CHMP4A-203ENST00000527154 SLC6A18Q96N87 628 aa17.03■□□□□ 0.32
CHMP4A-203ENST00000527154 HNRNPABQ99729 332 aaKnown RBP17.03■□□□□ 0.32
CHMP4A-203ENST00000527154 DCLK3Q9C098 648 aa17.03■□□□□ 0.32
CHMP4A-203ENST00000527154 CIPCQ9C0C6 399 aa17.03■□□□□ 0.32
CHMP4A-203ENST00000527154 MORC2Q9Y6X9 1032 aaPredicted RBP17.03■□□□□ 0.32
CHMP4A-203ENST00000527154 PLXNA2O75051 1894 aa17.02■□□□□ 0.32
CHMP4A-203ENST00000527154 FSBPO95073 299 aa17.02■□□□□ 0.32
CHMP4A-203ENST00000527154 WISP1O95388 367 aa17.02■□□□□ 0.32
CHMP4A-203ENST00000527154 ACP1P24666 158 aa17.02■□□□□ 0.32
CHMP4A-203ENST00000527154 HOXD9P28356 352 aaPredicted RBP17.02■□□□□ 0.32
CHMP4A-203ENST00000527154 CORO1AP31146 461 aaKnown RBP17.02■□□□□ 0.32
CHMP4A-203ENST00000527154 SNRPFP62306 86 aaKnown RBP17.02■□□□□ 0.32
CHMP4A-203ENST00000527154 TRPC3Q13507 836 aa17.02■□□□□ 0.32
CHMP4A-203ENST00000527154 TAF1BQ53T94 588 aaPredicted RBP17.02■□□□□ 0.32
CHMP4A-203ENST00000527154 C10orf120Q5SQS8 335 aa17.02■□□□□ 0.32
CHMP4A-203ENST00000527154 PRAMEF14Q5SWL7 426 aa17.02■□□□□ 0.32
CHMP4A-203ENST00000527154 BRAPQ7Z569 592 aa17.02■□□□□ 0.32
CHMP4A-203ENST00000527154 TADA2BQ86TJ2 420 aa17.02■□□□□ 0.32
CHMP4A-203ENST00000527154 ADIPOR2Q86V24 386 aa17.02■□□□□ 0.32
CHMP4A-203ENST00000527154 C12orf56Q8IXR9 622 aa17.02■□□□□ 0.32
CHMP4A-203ENST00000527154 PLEKHO2Q8TD55 490 aa17.02■□□□□ 0.32
CHMP4A-203ENST00000527154 ZNF578Q96N58 590 aaPredicted RBP17.02■□□□□ 0.32
CHMP4A-203ENST00000527154 CDK5RAP1Q96SZ6 601 aaKnown RBP17.02■□□□□ 0.32
CHMP4A-203ENST00000527154 ERVMER34-1Q9H9K5 563 aa17.02■□□□□ 0.32
CHMP4A-203ENST00000527154 HMGXB4Q9UGU5 601 aa17.02■□□□□ 0.32
CHMP4A-203ENST00000527154 STOML2Q9UJZ1 356 aa17.02■□□□□ 0.32
CHMP4A-203ENST00000527154 SRPRBQ9Y5M8 271 aaKnown RBP17.02■□□□□ 0.32
CHMP4A-203ENST00000527154 UBR5O95071 2799 aaPredicted RBP17.01■□□□□ 0.31
CHMP4A-203ENST00000527154 A0A087X0B3 334 aa17.01■□□□□ 0.31
CHMP4A-203ENST00000527154 VNN1O95497 513 aa17.01■□□□□ 0.31
CHMP4A-203ENST00000527154 C4BPAP04003 597 aaKnown RBP17.01■□□□□ 0.31
CHMP4A-203ENST00000527154 ITGAVP06756 1048 aa17.01■□□□□ 0.31
CHMP4A-203ENST00000527154 FAM200BP0CF97 657 aa17.01■□□□□ 0.31
CHMP4A-203ENST00000527154 CKMT2P17540 419 aa17.01■□□□□ 0.31
CHMP4A-203ENST00000527154 C21orf59P57076 290 aa17.01■□□□□ 0.31
CHMP4A-203ENST00000527154 TMPRSS3P57727 454 aa17.01■□□□□ 0.31
CHMP4A-203ENST00000527154 ZNF699Q32M78 642 aa17.01■□□□□ 0.31
CHMP4A-203ENST00000527154 ZNF667Q5HYK9 610 aa17.01■□□□□ 0.31
CHMP4A-203ENST00000527154 STXBP4Q6ZWJ1 553 aa17.01■□□□□ 0.31
CHMP4A-203ENST00000527154 ADAT2Q7Z6V5 191 aaKnown RBP17.01■□□□□ 0.31
CHMP4A-203ENST00000527154 ZC3H3Q8IXZ2 948 aaKnown RBP17.01■□□□□ 0.31
CHMP4A-203ENST00000527154 EID2Q8N6I1 236 aa17.01■□□□□ 0.31
CHMP4A-203ENST00000527154 C12orf29Q8N999 325 aa17.01■□□□□ 0.31
CHMP4A-203ENST00000527154 XXYLT1Q8NBI6 393 aa17.01■□□□□ 0.31
CHMP4A-203ENST00000527154 RDH13Q8NBN7 331 aa17.01■□□□□ 0.31
CHMP4A-203ENST00000527154 WFIKKN2Q8TEU8 576 aa17.01■□□□□ 0.31
CHMP4A-203ENST00000527154 GOLGA1Q92805 767 aa17.01■□□□□ 0.31
CHMP4A-203ENST00000527154 CCDC127Q96BQ5 260 aa17.01■□□□□ 0.31
CHMP4A-203ENST00000527154 RSPH9Q9H1X1 276 aaPredicted RBP17.01■□□□□ 0.31
CHMP4A-203ENST00000527154 SCML1Q9UN30 329 aa17.01■□□□□ 0.31
CHMP4A-203ENST00000527154 CLCA2Q9UQC9 943 aa17.01■□□□□ 0.31
CHMP4A-203ENST00000527154 H3BQV1 296 aa17■□□□□ 0.31
CHMP4A-203ENST00000527154 DNTTP04053 509 aa17■□□□□ 0.31
CHMP4A-203ENST00000527154 GLDCP23378 1020 aa17■□□□□ 0.31
CHMP4A-203ENST00000527154 GJB2P29033 226 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms