RNA–Protein interactions for RNA: ENST00000527020.5

USH1C-205, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,159 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-205ENST00000527020 TRIM55Q9BYV6 548 aa18.15■□□□□ 0.5
USH1C-205ENST00000527020 MKS1Q9NXB0 559 aa18.15■□□□□ 0.5
USH1C-205ENST00000527020 MOCS1Q9NZB8 636 aa18.15■□□□□ 0.5
USH1C-205ENST00000527020 A0A0G2JND7 137 aa18.14■□□□□ 0.49
USH1C-205ENST00000527020 F5H423 210 aaPredicted RBP18.14■□□□□ 0.49
USH1C-205ENST00000527020 TRAFD1O14545 582 aaPredicted RBP18.14■□□□□ 0.49
USH1C-205ENST00000527020 KLF11O14901 512 aa18.14■□□□□ 0.49
USH1C-205ENST00000527020 LRPAP1P30533 357 aa18.14■□□□□ 0.49
USH1C-205ENST00000527020 CRYBB1P53674 252 aaPredicted RBP18.14■□□□□ 0.49
USH1C-205ENST00000527020 BEX3Q00994 111 aa18.14■□□□□ 0.49
USH1C-205ENST00000527020 ACCSLQ4AC99 568 aa18.14■□□□□ 0.49
USH1C-205ENST00000527020 SYPL2Q5VXT5 272 aa18.14■□□□□ 0.49
USH1C-205ENST00000527020 RAB3IPQ96QF0 476 aaPredicted RBP18.14■□□□□ 0.49
USH1C-205ENST00000527020 MECRQ9BV79 373 aa18.14■□□□□ 0.49
USH1C-205ENST00000527020 EBF2Q9HAK2 575 aa18.14■□□□□ 0.49
USH1C-205ENST00000527020 CPA4Q9UI42 421 aa18.14■□□□□ 0.49
USH1C-205ENST00000527020 MCM8Q9UJA3 840 aa18.14■□□□□ 0.49
USH1C-205ENST00000527020 NPR3P17342 541 aa18.14■□□□□ 0.49
USH1C-205ENST00000527020 PTPN1P18031 435 aaKnown RBP18.14■□□□□ 0.49
USH1C-205ENST00000527020 MAP2K5Q13163 448 aa18.14■□□□□ 0.49
USH1C-205ENST00000527020 STEAP4Q687X5 459 aa18.14■□□□□ 0.49
USH1C-205ENST00000527020 CLEC20AQ6ZU45 233 aa18.14■□□□□ 0.49
USH1C-205ENST00000527020 HFE2Q6ZVN8 426 aa18.14■□□□□ 0.49
USH1C-205ENST00000527020 PSTKQ8IV42 348 aaKnown RBP18.14■□□□□ 0.49
USH1C-205ENST00000527020 UNC5BQ8IZJ1 945 aa18.14■□□□□ 0.49
USH1C-205ENST00000527020 RNF169Q8NCN4 708 aa18.14■□□□□ 0.49
USH1C-205ENST00000527020 RNF139Q8WU17 664 aa18.14■□□□□ 0.49
USH1C-205ENST00000527020 SKA1Q96BD8 255 aa18.14■□□□□ 0.49
USH1C-205ENST00000527020 ZFP42Q96MM3 310 aa18.14■□□□□ 0.49
USH1C-205ENST00000527020 SAR1AQ9NR31 198 aa18.14■□□□□ 0.49
USH1C-205ENST00000527020 CACNG4Q9UBN1 327 aa18.14■□□□□ 0.49
USH1C-205ENST00000527020 HEY2Q9UBP5 337 aa18.14■□□□□ 0.49
USH1C-205ENST00000527020 CENPFP49454 3210 aa18.13■□□□□ 0.49
USH1C-205ENST00000527020 GABRDO14764 452 aa18.13■□□□□ 0.49
USH1C-205ENST00000527020 MYL3P08590 195 aa18.13■□□□□ 0.49
USH1C-205ENST00000527020 EZRP15311 586 aaKnown RBP18.13■□□□□ 0.49
USH1C-205ENST00000527020 LGSNQ5TDP6 509 aa18.13■□□□□ 0.49
USH1C-205ENST00000527020 WSCD1Q658N2 575 aa18.13■□□□□ 0.49
USH1C-205ENST00000527020 COLGALT1Q8NBJ5 622 aa18.13■□□□□ 0.49
USH1C-205ENST00000527020 KCTD13Q8WZ19 329 aa18.13■□□□□ 0.49
USH1C-205ENST00000527020 PRR11Q96HE9 360 aaPredicted RBP18.13■□□□□ 0.49
USH1C-205ENST00000527020 PPP1R10Q96QC0 940 aaKnown RBP18.13■□□□□ 0.49
USH1C-205ENST00000527020 SLC2A13Q96QE2 648 aa18.13■□□□□ 0.49
USH1C-205ENST00000527020 TBC1D10AQ9BXI6 508 aa18.13■□□□□ 0.49
USH1C-205ENST00000527020 TMEM120AQ9BXJ8 343 aa18.13■□□□□ 0.49
USH1C-205ENST00000527020 SYNJ2BP-COX16A0A087WUM0 186 aa18.13■□□□□ 0.49
USH1C-205ENST00000527020 WDR27A2RRH5 827 aa18.13■□□□□ 0.49
USH1C-205ENST00000527020 MEIS3P2A8K0S8 358 aa18.13■□□□□ 0.49
USH1C-205ENST00000527020 RNF103O00237 685 aa18.13■□□□□ 0.49
USH1C-205ENST00000527020 CYB561D2O14569 222 aa18.13■□□□□ 0.49
USH1C-205ENST00000527020 KRT38O76015 456 aa18.13■□□□□ 0.49
USH1C-205ENST00000527020 IBSPP21815 317 aaPredicted RBP18.13■□□□□ 0.49
USH1C-205ENST00000527020 CCND1P24385 295 aa18.13■□□□□ 0.49
USH1C-205ENST00000527020 NOS2P35228 1153 aa18.13■□□□□ 0.49
USH1C-205ENST00000527020 FDFT1P37268 417 aa18.13■□□□□ 0.49
USH1C-205ENST00000527020 CRADDP78560 199 aa18.13■□□□□ 0.49
USH1C-205ENST00000527020 IRF5Q13568 498 aa18.13■□□□□ 0.49
USH1C-205ENST00000527020 CCL14Q16627 93 aa18.13■□□□□ 0.49
USH1C-205ENST00000527020 MROH9Q5TGP6 573 aa18.13■□□□□ 0.49
USH1C-205ENST00000527020 CCDC91Q7Z6B0 441 aa18.13■□□□□ 0.49
USH1C-205ENST00000527020 TP53INP2Q8IXH6 220 aa18.13■□□□□ 0.49
USH1C-205ENST00000527020 APBB2Q92870 758 aa18.13■□□□□ 0.49
USH1C-205ENST00000527020 MTBPQ96DY7 904 aa18.13■□□□□ 0.49
USH1C-205ENST00000527020 P2RY11Q96G91 374 aa18.13■□□□□ 0.49
USH1C-205ENST00000527020 SLC13A1Q9BZW2 595 aa18.13■□□□□ 0.49
USH1C-205ENST00000527020 IQCGQ9H095 443 aaKnown RBP18.13■□□□□ 0.49
USH1C-205ENST00000527020 PIGVQ9NUD9 493 aa18.13■□□□□ 0.49
USH1C-205ENST00000527020 COX16Q9P0S2 106 aa18.13■□□□□ 0.49
USH1C-205ENST00000527020 LNPEPQ9UIQ6 1025 aa18.13■□□□□ 0.49
USH1C-205ENST00000527020 CAPN15O75808 1086 aa18.12■□□□□ 0.49
USH1C-205ENST00000527020 WFS1O76024 890 aa18.12■□□□□ 0.49
USH1C-205ENST00000527020 ALDH1A2O94788 518 aa18.12■□□□□ 0.49
USH1C-205ENST00000527020 FYNP06241 537 aa18.12■□□□□ 0.49
USH1C-205ENST00000527020 MLNP12872 115 aa18.12■□□□□ 0.49
USH1C-205ENST00000527020 HOXC8P31273 242 aa18.12■□□□□ 0.49
USH1C-205ENST00000527020 ARFIP2P53365 341 aa18.12■□□□□ 0.49
USH1C-205ENST00000527020 RABGGTBP53611 331 aa18.12■□□□□ 0.49
USH1C-205ENST00000527020 DPYSQ14117 519 aa18.12■□□□□ 0.49
USH1C-205ENST00000527020 CYS1Q717R9 158 aa18.12■□□□□ 0.49
USH1C-205ENST00000527020 PDCD7Q8N8D1 485 aaKnown RBP18.12■□□□□ 0.49
USH1C-205ENST00000527020 ARMC2Q8NEN0 867 aa18.12■□□□□ 0.49
USH1C-205ENST00000527020 CEP41Q9BYV8 373 aa18.12■□□□□ 0.49
USH1C-205ENST00000527020 SIRPGQ9P1W8 387 aa18.12■□□□□ 0.49
USH1C-205ENST00000527020 SLC17A6Q9P2U8 582 aa18.12■□□□□ 0.49
USH1C-205ENST00000527020 C2orf71A6NGG8 1288 aa18.11■□□□□ 0.49
USH1C-205ENST00000527020 M0QYT0 321 aa18.11■□□□□ 0.49
USH1C-205ENST00000527020 NRP1O14786 923 aa18.11■□□□□ 0.49
USH1C-205ENST00000527020 DNAJC6O75061 913 aa18.11■□□□□ 0.49
USH1C-205ENST00000527020 EPHB2P29323 1055 aa18.11■□□□□ 0.49
USH1C-205ENST00000527020 GLUD2P49448 558 aa18.11■□□□□ 0.49
USH1C-205ENST00000527020 CDK16Q00536 496 aa18.11■□□□□ 0.49
USH1C-205ENST00000527020 NIPAL4Q0D2K0 466 aa18.11■□□□□ 0.49
USH1C-205ENST00000527020 WASHC5Q12768 1159 aa18.11■□□□□ 0.49
USH1C-205ENST00000527020 MDH1BQ5I0G3 518 aa18.11■□□□□ 0.49
USH1C-205ENST00000527020 LRRC8BQ6P9F7 803 aa18.11■□□□□ 0.49
USH1C-205ENST00000527020 FAM13CQ8NE31 585 aa18.11■□□□□ 0.49
USH1C-205ENST00000527020 ARNTL2Q8WYA1 636 aa18.11■□□□□ 0.49
USH1C-205ENST00000527020 DNAI2Q9GZS0 605 aa18.11■□□□□ 0.49
USH1C-205ENST00000527020 TLE6Q9H808 572 aa18.11■□□□□ 0.49
USH1C-205ENST00000527020 CRTAC1Q9NQ79 661 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms