RNA–Protein interactions for RNA: ENST00000526772.5

CTNND1-214, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 4,966 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-214ENST00000526772 PGM2L1Q6PCE3 622 aa6.72□□□□□ -1.33
CTNND1-214ENST00000526772 HAGHLQ6PII5 290 aaPredicted RBP6.72□□□□□ -1.33
CTNND1-214ENST00000526772 SLC13A5Q86YT5 568 aaPredicted RBP6.72□□□□□ -1.33
CTNND1-214ENST00000526772 KYQ8NBH2 561 aa6.72□□□□□ -1.33
CTNND1-214ENST00000526772 KCTD6Q8NC69 237 aa6.72□□□□□ -1.33
CTNND1-214ENST00000526772 RDM1Q8NG50 284 aa6.72□□□□□ -1.33
CTNND1-214ENST00000526772 HM13Q8TCT9 377 aa6.72□□□□□ -1.33
CTNND1-214ENST00000526772 TBCKQ8TEA7 893 aa6.72□□□□□ -1.33
CTNND1-214ENST00000526772 SMG7Q92540 1137 aaKnown RBP6.72□□□□□ -1.33
CTNND1-214ENST00000526772 GPKOWQ92917 476 aaPredicted RBP eCLIP6.72□□□□□ -1.33
CTNND1-214ENST00000526772 TBRG4Q969Z0 631 aaKnown RBP eCLIP6.72□□□□□ -1.335e-6■■■□□ 16.7
CTNND1-214ENST00000526772 OXNAD1Q96HP4 312 aaPredicted RBP6.72□□□□□ -1.33
CTNND1-214ENST00000526772 TMEM109Q9BVC6 243 aa6.72□□□□□ -1.33
CTNND1-214ENST00000526772 CCNB1IP1Q9NPC3 277 aa6.72□□□□□ -1.33
CTNND1-214ENST00000526772 TCF7L2Q9NQB0 619 aa6.72□□□□□ -1.33
CTNND1-214ENST00000526772 GPHNQ9NQX3 736 aaPredicted RBP6.72□□□□□ -1.33
CTNND1-214ENST00000526772 SMYD2Q9NRG4 433 aa6.72□□□□□ -1.33
CTNND1-214ENST00000526772 SNTG2Q9NY99 539 aa6.72□□□□□ -1.33
CTNND1-214ENST00000526772 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP6.72□□□□□ -1.333e-7■■□□□ 14.4
CTNND1-214ENST00000526772 VTI1BQ9UEU0 232 aa6.72□□□□□ -1.33
CTNND1-214ENST00000526772 RNF17Q9BXT8 1623 aaKnown RBP6.72□□□□□ -1.33
CTNND1-214ENST00000526772 OR14I1A6ND48 311 aa6.72□□□□□ -1.33
CTNND1-214ENST00000526772 FCHO1O14526 889 aa6.72□□□□□ -1.33
CTNND1-214ENST00000526772 ATMINO43313 823 aaPredicted RBP6.72□□□□□ -1.33
CTNND1-214ENST00000526772 CD19P15391 556 aa6.72□□□□□ -1.33
CTNND1-214ENST00000526772 FDFT1P37268 417 aa6.72□□□□□ -1.33
CTNND1-214ENST00000526772 RGS6P49758 472 aa6.72□□□□□ -1.33
CTNND1-214ENST00000526772 RGS7P49802 495 aa6.72□□□□□ -1.33
CTNND1-214ENST00000526772 DEFA5Q01523 94 aa6.72□□□□□ -1.33
CTNND1-214ENST00000526772 SCN1BQ07699 218 aa6.72□□□□□ -1.33
CTNND1-214ENST00000526772 C11orf63Q6NUN7 778 aa6.72□□□□□ -1.33
CTNND1-214ENST00000526772 SSX9Q7RTT3 188 aa6.72□□□□□ -1.33
CTNND1-214ENST00000526772 GANCQ8TET4 914 aa6.72□□□□□ -1.33
CTNND1-214ENST00000526772 ZSWIM1Q9BR11 485 aa6.72□□□□□ -1.33
CTNND1-214ENST00000526772 WDR11Q9BZH6 1224 aa6.72□□□□□ -1.33
CTNND1-214ENST00000526772 LACRTQ9GZZ8 138 aa6.72□□□□□ -1.33
CTNND1-214ENST00000526772 VPS33BQ9H267 617 aa6.72□□□□□ -1.33
CTNND1-214ENST00000526772 CDC42EP4Q9H3Q1 356 aaKnown RBP6.72□□□□□ -1.33
CTNND1-214ENST00000526772 ZNF334Q9HCZ1 680 aaPredicted RBP6.72□□□□□ -1.33
CTNND1-214ENST00000526772 TMEM9Q9P0T7 183 aa6.72□□□□□ -1.33
CTNND1-214ENST00000526772 IGSF9Q9P2J2 1179 aa6.72□□□□□ -1.33
CTNND1-214ENST00000526772 PEX16Q9Y5Y5 336 aa6.72□□□□□ -1.33
CTNND1-214ENST00000526772 SF3B1O75533 1304 aaKnown RBP eCLIP6.72□□□□□ -1.335e-6■■■■■ 59.8
CTNND1-214ENST00000526772 LRRN2O75325 713 aa6.71□□□□□ -1.33
CTNND1-214ENST00000526772 PAHP00439 452 aa6.71□□□□□ -1.33
CTNND1-214ENST00000526772 MYL4P12829 197 aa6.71□□□□□ -1.33
CTNND1-214ENST00000526772 ME2P23368 584 aa6.71□□□□□ -1.33
CTNND1-214ENST00000526772 LIG4P49917 911 aa6.71□□□□□ -1.33
CTNND1-214ENST00000526772 ARSEP51690 589 aa6.71□□□□□ -1.33
CTNND1-214ENST00000526772 HK2P52789 917 aa6.71□□□□□ -1.33
CTNND1-214ENST00000526772 ZNF45Q02386 682 aa6.71□□□□□ -1.33
CTNND1-214ENST00000526772 PTK7Q13308 1070 aa6.71□□□□□ -1.33
CTNND1-214ENST00000526772 MPP2Q14168 576 aa6.71□□□□□ -1.33
CTNND1-214ENST00000526772 PKN2Q16513 984 aaKnown RBP6.71□□□□□ -1.33
CTNND1-214ENST00000526772 ODR4Q5SWX8 454 aa6.71□□□□□ -1.33
CTNND1-214ENST00000526772 AFTPHQ6ULP2 937 aa6.71□□□□□ -1.33
CTNND1-214ENST00000526772 C8orf59Q8N0T1 100 aaPredicted RBP6.71□□□□□ -1.33
CTNND1-214ENST00000526772 PPM1NQ8N819 430 aa6.71□□□□□ -1.33
CTNND1-214ENST00000526772 ZNF594Q96JF6 807 aaPredicted RBP6.71□□□□□ -1.33
CTNND1-214ENST00000526772 FAR2Q96K12 515 aa6.71□□□□□ -1.33
CTNND1-214ENST00000526772 SENP7Q9BQF6 1050 aa6.71□□□□□ -1.33
CTNND1-214ENST00000526772 KATNAL1Q9BW62 490 aa6.71□□□□□ -1.33
CTNND1-214ENST00000526772 TLR10Q9BXR5 811 aa6.71□□□□□ -1.33
CTNND1-214ENST00000526772 KIAA1683Q9H0B3 1180 aa6.71□□□□□ -1.33
CTNND1-214ENST00000526772 GTSE1Q9NYZ3 720 aa6.71□□□□□ -1.33
CTNND1-214ENST00000526772 SMARCAL1Q9NZC9 954 aa6.71□□□□□ -1.33
CTNND1-214ENST00000526772 MALT1Q9UDY8 824 aa6.71□□□□□ -1.33
CTNND1-214ENST00000526772 C6orf229H3BNL8 230 aa6.71□□□□□ -1.33
CTNND1-214ENST00000526772 BTN3A1O00481 513 aa6.71□□□□□ -1.33
CTNND1-214ENST00000526772 SSNA1O43805 119 aa6.71□□□□□ -1.33
CTNND1-214ENST00000526772 UCHL3P15374 230 aa6.71□□□□□ -1.33
CTNND1-214ENST00000526772 TRIM32Q13049 653 aa6.71□□□□□ -1.33
CTNND1-214ENST00000526772 FAM153CQ494X1 144 aa6.71□□□□□ -1.33
CTNND1-214ENST00000526772 GPATCH4Q5T3I0 446 aaKnown RBP6.71□□□□□ -1.33
CTNND1-214ENST00000526772 C4orf50Q6ZRC1 276 aa6.71□□□□□ -1.33
CTNND1-214ENST00000526772 C4orf33Q8N1A6 199 aa6.71□□□□□ -1.33
CTNND1-214ENST00000526772 NFATC2IPQ8NCF5 419 aa6.71□□□□□ -1.33
CTNND1-214ENST00000526772 CLP1Q92989 425 aaKnown RBP6.71□□□□□ -1.33
CTNND1-214ENST00000526772 HGH1Q9BTY7 390 aa6.71□□□□□ -1.33
CTNND1-214ENST00000526772 COMMD9Q9P000 198 aa6.71□□□□□ -1.33
CTNND1-214ENST00000526772 CHKBQ9Y259 395 aa6.71□□□□□ -1.33
CTNND1-214ENST00000526772 PCDHB4Q9Y5E5 795 aa6.71□□□□□ -1.33
CTNND1-214ENST00000526772 GRIN2DO15399 1336 aa6.71□□□□□ -1.34
CTNND1-214ENST00000526772 WDR64B1ANS9 1081 aa6.71□□□□□ -1.34
CTNND1-214ENST00000526772 PSMD12O00232 456 aaPredicted RBP6.71□□□□□ -1.34
CTNND1-214ENST00000526772 C2CD2LO14523 706 aa6.71□□□□□ -1.34
CTNND1-214ENST00000526772 SORBS3O60504 671 aa6.71□□□□□ -1.34
CTNND1-214ENST00000526772 MAGEC1O60732 1142 aa6.71□□□□□ -1.34
CTNND1-214ENST00000526772 ABHD2P08910 425 aa6.71□□□□□ -1.34
CTNND1-214ENST00000526772 IFI30P13284 250 aa6.71□□□□□ -1.34
CTNND1-214ENST00000526772 CHRNB3Q05901 458 aa6.71□□□□□ -1.34
CTNND1-214ENST00000526772 TCIRG1Q13488 830 aa6.71□□□□□ -1.34
CTNND1-214ENST00000526772 EAPPQ56P03 285 aaPredicted RBP6.71□□□□□ -1.34
CTNND1-214ENST00000526772 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.71□□□□□ -1.34
CTNND1-214ENST00000526772 EFL1Q7Z2Z2 1120 aaKnown RBP6.71□□□□□ -1.34
CTNND1-214ENST00000526772 CDKL3Q8IVW4 592 aaPredicted RBP6.71□□□□□ -1.34
CTNND1-214ENST00000526772 DEFB107AQ8IZN7 70 aa6.71□□□□□ -1.34
CTNND1-214ENST00000526772 TTC8Q8TAM2 541 aa6.71□□□□□ -1.34
CTNND1-214ENST00000526772 FAR1Q8WVX9 515 aa6.71□□□□□ -1.34
CTNND1-214ENST00000526772 COPS4Q9BT78 406 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms