RNA–Protein interactions for RNA: ENST00000526468.1

CAPN1-204, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 690 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-204ENST00000526468 SNX19Q92543 992 aa12.3□□□□□ -0.44
CAPN1-204ENST00000526468 CCDC47Q96A33 483 aaKnown RBP12.3□□□□□ -0.44
CAPN1-204ENST00000526468 GPR174Q9BXC1 333 aa12.3□□□□□ -0.44
CAPN1-204ENST00000526468 CIPCQ9C0C6 399 aa12.3□□□□□ -0.44
CAPN1-204ENST00000526468 USP36Q9P275 1121 aaKnown RBP12.3□□□□□ -0.44
CAPN1-204ENST00000526468 CFAP45Q9UL16 551 aa12.3□□□□□ -0.44
CAPN1-204ENST00000526468 STRIP2Q9ULQ0 834 aa12.3□□□□□ -0.44
CAPN1-204ENST00000526468 ZNF510Q9Y2H8 683 aa12.3□□□□□ -0.44
CAPN1-204ENST00000526468 ZDHHC9Q9Y397 364 aa12.3□□□□□ -0.44
CAPN1-204ENST00000526468 ARID1BQ8NFD5 2236 aaPredicted RBP12.3□□□□□ -0.44
CAPN1-204ENST00000526468 COL5A1P20908 1838 aaPredicted RBP12.3□□□□□ -0.44
CAPN1-204ENST00000526468 A0A1B0GTW7 788 aa12.29□□□□□ -0.44
CAPN1-204ENST00000526468 A0A1B0GVL5 298 aa12.29□□□□□ -0.44
CAPN1-204ENST00000526468 CCP110O43303 1012 aa12.29□□□□□ -0.44
CAPN1-204ENST00000526468 CER1O95813 267 aa12.29□□□□□ -0.44
CAPN1-204ENST00000526468 PRR29P0C7W0 189 aa12.29□□□□□ -0.44
CAPN1-204ENST00000526468 HOXB3P14651 431 aaPredicted RBP12.29□□□□□ -0.44
CAPN1-204ENST00000526468 PRKCHP24723 683 aa12.29□□□□□ -0.44
CAPN1-204ENST00000526468 CHKAP35790 457 aa12.29□□□□□ -0.44
CAPN1-204ENST00000526468 MXI1P50539 228 aa12.29□□□□□ -0.44
CAPN1-204ENST00000526468 ARID5AQ03989 594 aa12.29□□□□□ -0.44
CAPN1-204ENST00000526468 PPP3CAQ08209 521 aa12.29□□□□□ -0.44
CAPN1-204ENST00000526468 PKP1Q13835 747 aa12.29□□□□□ -0.44
CAPN1-204ENST00000526468 COL9A2Q14055 689 aaPredicted RBP12.29□□□□□ -0.44
CAPN1-204ENST00000526468 TRIP6Q15654 476 aaKnown RBP12.29□□□□□ -0.44
CAPN1-204ENST00000526468 PPP1R26Q5T8A7 1209 aaPredicted RBP12.29□□□□□ -0.44
CAPN1-204ENST00000526468 DCAF12L1Q5VU92 463 aa12.29□□□□□ -0.44
CAPN1-204ENST00000526468 FYB2Q5VWT5 728 aa12.29□□□□□ -0.44
CAPN1-204ENST00000526468 RAB44Q7Z6P3 723 aaPredicted RBP12.29□□□□□ -0.44
CAPN1-204ENST00000526468 SCD5Q86SK9 330 aa12.29□□□□□ -0.44
CAPN1-204ENST00000526468 DENND1CQ8IV53 801 aa12.29□□□□□ -0.44
CAPN1-204ENST00000526468 TMEM174Q8WUU8 243 aa12.29□□□□□ -0.44
CAPN1-204ENST00000526468 P2RY11Q96G91 374 aa12.29□□□□□ -0.44
CAPN1-204ENST00000526468 ZNF419Q96HQ0 510 aaPredicted RBP12.29□□□□□ -0.44
CAPN1-204ENST00000526468 DUSP16Q9BY84 665 aa12.29□□□□□ -0.44
CAPN1-204ENST00000526468 DCLK3Q9C098 648 aa12.29□□□□□ -0.44
CAPN1-204ENST00000526468 MKRN2Q9H000 416 aaKnown RBP12.29□□□□□ -0.44
CAPN1-204ENST00000526468 CLIC5Q9NZA1 410 aa12.29□□□□□ -0.44
CAPN1-204ENST00000526468 MARCH2Q9P0N8 246 aa12.29□□□□□ -0.44
CAPN1-204ENST00000526468 THAP10Q9P2Z0 257 aaPredicted RBP12.29□□□□□ -0.44
CAPN1-204ENST00000526468 SLC27A6Q9Y2P4 619 aa12.29□□□□□ -0.44
CAPN1-204ENST00000526468 NBEAQ8NFP9 2946 aa12.29□□□□□ -0.44
CAPN1-204ENST00000526468 LAMA5O15230 3695 aa12.29□□□□□ -0.44
CAPN1-204ENST00000526468 SLC12A8A0AV02 714 aa12.28□□□□□ -0.44
CAPN1-204ENST00000526468 NPC1O15118 1278 aa12.28□□□□□ -0.44
CAPN1-204ENST00000526468 MAPK13O15264 365 aa12.28□□□□□ -0.44
CAPN1-204ENST00000526468 GJB3O75712 270 aa12.28□□□□□ -0.44
CAPN1-204ENST00000526468 KLKB1P03952 638 aa12.28□□□□□ -0.44
CAPN1-204ENST00000526468 MYL1P05976 194 aa12.28□□□□□ -0.44
CAPN1-204ENST00000526468 EPHX1P07099 455 aa12.28□□□□□ -0.44
CAPN1-204ENST00000526468 ACADMP11310 421 aa12.28□□□□□ -0.44
CAPN1-204ENST00000526468 CDK11BP21127 795 aaKnown RBP12.28□□□□□ -0.44
CAPN1-204ENST00000526468 TPMTP51580 245 aa12.28□□□□□ -0.44
CAPN1-204ENST00000526468 COG7P83436 770 aa12.28□□□□□ -0.44
CAPN1-204ENST00000526468 RING1Q06587 406 aa12.28□□□□□ -0.44
CAPN1-204ENST00000526468 SLC14A1Q13336 389 aa12.28□□□□□ -0.44
CAPN1-204ENST00000526468 ZNF234Q14588 700 aa12.28□□□□□ -0.44
CAPN1-204ENST00000526468 EIF4HQ15056 248 aaKnown RBP12.28□□□□□ -0.44
CAPN1-204ENST00000526468 GOLGA7BQ2TAP0 167 aa12.28□□□□□ -0.44
CAPN1-204ENST00000526468 ATL3Q6DD88 541 aa12.28□□□□□ -0.44
CAPN1-204ENST00000526468 SERPINA13PQ6UXR4 307 aa12.28□□□□□ -0.44
CAPN1-204ENST00000526468 FAM124AQ86V42 546 aa12.28□□□□□ -0.44
CAPN1-204ENST00000526468 ARHGAP18Q8N392 663 aa12.28□□□□□ -0.44
CAPN1-204ENST00000526468 SETD7Q8WTS6 366 aaKnown RBP12.28□□□□□ -0.44
CAPN1-204ENST00000526468 DDI1Q8WTU0 396 aa12.28□□□□□ -0.44
CAPN1-204ENST00000526468 SORCS1Q8WY21 1168 aa12.28□□□□□ -0.44
CAPN1-204ENST00000526468 PRCCQ92733 491 aaPredicted RBP12.28□□□□□ -0.44
CAPN1-204ENST00000526468 SIPA1Q96FS4 1042 aa12.28□□□□□ -0.44
CAPN1-204ENST00000526468 ARID3AQ99856 593 aa12.28□□□□□ -0.44
CAPN1-204ENST00000526468 ZDHHC5Q9C0B5 715 aa12.28□□□□□ -0.44
CAPN1-204ENST00000526468 TMEM8AQ9HCN3 771 aa12.28□□□□□ -0.44
CAPN1-204ENST00000526468 MAPK8IP1Q9UQF2 711 aa12.28□□□□□ -0.44
CAPN1-204ENST00000526468 TRAF3IP3Q9Y228 551 aa12.28□□□□□ -0.44
CAPN1-204ENST00000526468 PTPRQQ9UMZ3 2332 aa12.28□□□□□ -0.44
CAPN1-204ENST00000526468 KCNJ18B7U540 433 aa12.27□□□□□ -0.45
CAPN1-204ENST00000526468 OXTRP30559 389 aa12.27□□□□□ -0.45
CAPN1-204ENST00000526468 MATKP42679 507 aa12.27□□□□□ -0.45
CAPN1-204ENST00000526468 SLC8A3P57103 927 aa12.27□□□□□ -0.45
CAPN1-204ENST00000526468 YWHAGP61981 247 aaKnown RBP eCLIP12.27□□□□□ -0.45
CAPN1-204ENST00000526468 FNDC3BQ53EP0 1204 aaKnown RBP12.27□□□□□ -0.45
CAPN1-204ENST00000526468 PIGZQ86VD9 579 aa12.27□□□□□ -0.45
CAPN1-204ENST00000526468 PROSER1Q86XN7 944 aa12.27□□□□□ -0.45
CAPN1-204ENST00000526468 TMPRSS6Q8IU80 811 aa12.27□□□□□ -0.45
CAPN1-204ENST00000526468 PNPLA1Q8N8W4 532 aa12.27□□□□□ -0.45
CAPN1-204ENST00000526468 PLD4Q96BZ4 506 aa12.27□□□□□ -0.45
CAPN1-204ENST00000526468 HEXIM2Q96MH2 286 aaKnown RBP12.27□□□□□ -0.45
CAPN1-204ENST00000526468 SCAND2PQ9GZW5 306 aaPredicted RBP12.27□□□□□ -0.45
CAPN1-204ENST00000526468 KCND1Q9NSA2 647 aa12.27□□□□□ -0.45
CAPN1-204ENST00000526468 WSB2Q9NYS7 404 aaPredicted RBP12.27□□□□□ -0.45
CAPN1-204ENST00000526468 EIF2B4Q9UI10 523 aaKnown RBP12.27□□□□□ -0.45
CAPN1-204ENST00000526468 AGO1Q9UL18 857 aaKnown RBP12.27□□□□□ -0.45
CAPN1-204ENST00000526468 APOBEC2Q9Y235 224 aaKnown RBP12.27□□□□□ -0.45
CAPN1-204ENST00000526468 FNDC3AQ9Y2H6 1198 aaKnown RBP12.27□□□□□ -0.45
CAPN1-204ENST00000526468 NFE2L3Q9Y4A8 694 aa12.27□□□□□ -0.45
CAPN1-204ENST00000526468 USP3Q9Y6I4 520 aa12.27□□□□□ -0.45
CAPN1-204ENST00000526468 ASXL3Q9C0F0 2248 aa12.27□□□□□ -0.45
CAPN1-204ENST00000526468 BCAT2O15382 392 aaPredicted RBP12.26□□□□□ -0.45
CAPN1-204ENST00000526468 HLA-EP13747 358 aa12.26□□□□□ -0.45
CAPN1-204ENST00000526468 RPL13P26373 211 aaKnown RBP12.26□□□□□ -0.45
CAPN1-204ENST00000526468 PSMC2P35998 433 aaKnown RBP12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms