RNA–Protein interactions for RNA: ENST00000525916.1

CCDC90B-205, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 656 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-205ENST00000525916 AK5Q9Y6K8 562 aa13.12□□□□□ -0.31
CCDC90B-205ENST00000525916 TDRD6O60522 2096 aaKnown RBP13.11□□□□□ -0.31
CCDC90B-205ENST00000525916 HHLA1C9JL84 531 aa13.11□□□□□ -0.31
CCDC90B-205ENST00000525916 TGFB1I1O43294 461 aa13.11□□□□□ -0.31
CCDC90B-205ENST00000525916 FSBPO95073 299 aa13.11□□□□□ -0.31
CCDC90B-205ENST00000525916 HMBSP08397 361 aa13.11□□□□□ -0.31
CCDC90B-205ENST00000525916 JUPP14923 745 aa13.11□□□□□ -0.31
CCDC90B-205ENST00000525916 ADORA2BP29275 332 aa13.11□□□□□ -0.31
CCDC90B-205ENST00000525916 HNF1BP35680 557 aa13.11□□□□□ -0.31
CCDC90B-205ENST00000525916 CTSKP43235 329 aa13.11□□□□□ -0.31
CCDC90B-205ENST00000525916 DNAJC3Q13217 504 aa13.11□□□□□ -0.31
CCDC90B-205ENST00000525916 BIRC3Q13489 604 aa13.11□□□□□ -0.31
CCDC90B-205ENST00000525916 TMEM215Q68D42 235 aa13.11□□□□□ -0.31
CCDC90B-205ENST00000525916 KLHDC10Q6PID8 442 aa13.11□□□□□ -0.31
CCDC90B-205ENST00000525916 CCDC73Q6ZRK6 1079 aa13.11□□□□□ -0.31
CCDC90B-205ENST00000525916 ADAT2Q7Z6V5 191 aaKnown RBP13.11□□□□□ -0.31
CCDC90B-205ENST00000525916 GATAD2AQ86YP4 633 aa13.11□□□□□ -0.31
CCDC90B-205ENST00000525916 ZNF366Q8N895 744 aa13.11□□□□□ -0.31
CCDC90B-205ENST00000525916 C12orf29Q8N999 325 aa13.11□□□□□ -0.31
CCDC90B-205ENST00000525916 OR2T3Q8NH03 318 aa13.11□□□□□ -0.31
CCDC90B-205ENST00000525916 PLEKHO2Q8TD55 490 aa13.11□□□□□ -0.31
CCDC90B-205ENST00000525916 VRTNQ9H8Y1 702 aa13.11□□□□□ -0.31
CCDC90B-205ENST00000525916 OSGEPQ9NPF4 335 aa13.11□□□□□ -0.31
CCDC90B-205ENST00000525916 HPSEQ9Y251 543 aa13.11□□□□□ -0.31
CCDC90B-205ENST00000525916 CFAP46Q8IYW2 2715 aa13.11□□□□□ -0.31
CCDC90B-205ENST00000525916 NAV2Q8IVL1 2488 aa13.1□□□□□ -0.31
CCDC90B-205ENST00000525916 ENC1O14682 589 aa13.1□□□□□ -0.31
CCDC90B-205ENST00000525916 EIF3DO15371 548 aaKnown RBP eCLIP13.1□□□□□ -0.31
CCDC90B-205ENST00000525916 RRP8O43159 456 aaKnown RBP13.1□□□□□ -0.31
CCDC90B-205ENST00000525916 PAPSS1O43252 624 aaPredicted RBP13.1□□□□□ -0.31
CCDC90B-205ENST00000525916 SEMA4FO95754 770 aa13.1□□□□□ -0.31
CCDC90B-205ENST00000525916 FAM200BP0CF97 657 aa13.1□□□□□ -0.31
CCDC90B-205ENST00000525916 CORO1AP31146 461 aaKnown RBP13.1□□□□□ -0.31
CCDC90B-205ENST00000525916 NDST1P52848 882 aa13.1□□□□□ -0.31
CCDC90B-205ENST00000525916 TARDBPQ13148 414 aaKnown RBP eCLIP13.1□□□□□ -0.31
CCDC90B-205ENST00000525916 CAMK2GQ13555 558 aaPredicted RBP13.1□□□□□ -0.31
CCDC90B-205ENST00000525916 EIF4HQ15056 248 aaKnown RBP13.1□□□□□ -0.31
CCDC90B-205ENST00000525916 E2F4Q16254 413 aa13.1□□□□□ -0.31
CCDC90B-205ENST00000525916 HES3Q5TGS1 186 aa13.1□□□□□ -0.31
CCDC90B-205ENST00000525916 PCSK4Q6UW60 755 aa13.1□□□□□ -0.31
CCDC90B-205ENST00000525916 CLEC20AQ6ZU45 233 aa13.1□□□□□ -0.31
CCDC90B-205ENST00000525916 EPM2AIP1Q7L775 607 aaPredicted RBP13.1□□□□□ -0.31
CCDC90B-205ENST00000525916 NELFCDQ8IXH7 590 aa13.1□□□□□ -0.31
CCDC90B-205ENST00000525916 PDILTQ8N807 584 aa13.1□□□□□ -0.31
CCDC90B-205ENST00000525916 XXYLT1Q8NBI6 393 aa13.1□□□□□ -0.31
CCDC90B-205ENST00000525916 LSM14AQ8ND56 463 aaKnown RBP13.1□□□□□ -0.31
CCDC90B-205ENST00000525916 RASAL2Q9UJF2 1139 aa13.1□□□□□ -0.31
CCDC90B-205ENST00000525916 NAGPAQ9UK23 515 aa13.1□□□□□ -0.31
CCDC90B-205ENST00000525916 PCDHGA1Q9Y5H4 931 aa13.1□□□□□ -0.31
CCDC90B-205ENST00000525916 MAST4O15021 2626 aa13.1□□□□□ -0.31
CCDC90B-205ENST00000525916 MYO18BQ8IUG5 2567 aa13.09□□□□□ -0.31
CCDC90B-205ENST00000525916 A0A1B0GTQ1 180 aa13.09□□□□□ -0.31
CCDC90B-205ENST00000525916 TEX51A0A1B0GUA7 166 aa13.09□□□□□ -0.31
CCDC90B-205ENST00000525916 J3QKU1 62 aa13.09□□□□□ -0.31
CCDC90B-205ENST00000525916 CAPN9O14815 690 aa13.09□□□□□ -0.31
CCDC90B-205ENST00000525916 TSPAN3O60637 253 aa13.09□□□□□ -0.31
CCDC90B-205ENST00000525916 RFPL3O75679 317 aa13.09□□□□□ -0.31
CCDC90B-205ENST00000525916 CD27P26842 260 aa13.09□□□□□ -0.31
CCDC90B-205ENST00000525916 CHKAP35790 457 aa13.09□□□□□ -0.31
CCDC90B-205ENST00000525916 CFHR1Q03591 330 aa13.09□□□□□ -0.31
CCDC90B-205ENST00000525916 ARID5AQ03989 594 aa13.09□□□□□ -0.31
CCDC90B-205ENST00000525916 NCOA4Q13772 614 aa13.09□□□□□ -0.31
CCDC90B-205ENST00000525916 BMT2Q1RMZ1 405 aa13.09□□□□□ -0.31
CCDC90B-205ENST00000525916 PRAMEF14Q5SWL7 426 aa13.09□□□□□ -0.31
CCDC90B-205ENST00000525916 GPR155Q7Z3F1 870 aa13.09□□□□□ -0.31
CCDC90B-205ENST00000525916 SCD5Q86SK9 330 aa13.09□□□□□ -0.31
CCDC90B-205ENST00000525916 SNIP1Q8TAD8 396 aaKnown RBP13.09□□□□□ -0.31
CCDC90B-205ENST00000525916 ZNF507Q8TCN5 953 aa13.09□□□□□ -0.31
CCDC90B-205ENST00000525916 CYB5D2Q8WUJ1 264 aa13.09□□□□□ -0.31
CCDC90B-205ENST00000525916 BAP1Q92560 729 aa13.09□□□□□ -0.31
CCDC90B-205ENST00000525916 CNDP2Q96KP4 475 aaKnown RBP13.09□□□□□ -0.31
CCDC90B-205ENST00000525916 ORAI3Q9BRQ5 295 aa13.09□□□□□ -0.31
CCDC90B-205ENST00000525916 BTBD1Q9H0C5 482 aa13.09□□□□□ -0.31
CCDC90B-205ENST00000525916 CUEDC2Q9H467 287 aa13.09□□□□□ -0.31
CCDC90B-205ENST00000525916 FAM13BQ9NYF5 915 aa13.09□□□□□ -0.31
CCDC90B-205ENST00000525916 AGO1Q9UL18 857 aaKnown RBP13.09□□□□□ -0.31
CCDC90B-205ENST00000525916 ZNF510Q9Y2H8 683 aa13.09□□□□□ -0.31
CCDC90B-205ENST00000525916 PCDHA5Q9Y5H7 936 aa13.09□□□□□ -0.31
CCDC90B-205ENST00000525916 VNN1O95497 513 aa13.08□□□□□ -0.32
CCDC90B-205ENST00000525916 LDOC1O95751 146 aaPredicted RBP13.08□□□□□ -0.32
CCDC90B-205ENST00000525916 CYBBP04839 570 aa13.08□□□□□ -0.32
CCDC90B-205ENST00000525916 ACADVLP49748 655 aa13.08□□□□□ -0.32
CCDC90B-205ENST00000525916 EFEMP1Q12805 493 aa13.08□□□□□ -0.32
CCDC90B-205ENST00000525916 RTP5Q14D33 572 aa13.08□□□□□ -0.32
CCDC90B-205ENST00000525916 E2F5Q15329 346 aa13.08□□□□□ -0.32
CCDC90B-205ENST00000525916 FNDC3BQ53EP0 1204 aaKnown RBP13.08□□□□□ -0.32
CCDC90B-205ENST00000525916 DENND1CQ8IV53 801 aa13.08□□□□□ -0.32
CCDC90B-205ENST00000525916 CRYBG2Q8N1P7 616 aa13.08□□□□□ -0.32
CCDC90B-205ENST00000525916 IQUBQ8NA54 791 aa13.08□□□□□ -0.32
CCDC90B-205ENST00000525916 DDI1Q8WTU0 396 aa13.08□□□□□ -0.32
CCDC90B-205ENST00000525916 SLC6A18Q96N87 628 aa13.08□□□□□ -0.32
CCDC90B-205ENST00000525916 NRSN2Q9GZP1 204 aa13.08□□□□□ -0.32
CCDC90B-205ENST00000525916 TMEM245Q9H330 911 aa13.08□□□□□ -0.32
CCDC90B-205ENST00000525916 A0A1B0GVL5 298 aa13.07□□□□□ -0.32
CCDC90B-205ENST00000525916 LRRIQ3A6PVS8 624 aaPredicted RBP13.07□□□□□ -0.32
CCDC90B-205ENST00000525916 POLR2DO15514 142 aaKnown RBP13.07□□□□□ -0.32
CCDC90B-205ENST00000525916 BRINP1O60477 761 aa13.07□□□□□ -0.32
CCDC90B-205ENST00000525916 IGHV4-34P06331 123 aa13.07□□□□□ -0.32
CCDC90B-205ENST00000525916 RALAP11233 206 aa13.07□□□□□ -0.32
CCDC90B-205ENST00000525916 PFKFB1P16118 471 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms