RNA–Protein interactions for RNA: ENST00000525141.1

SMCO4-202, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMCO4, Length 889 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-202ENST00000525141 CDK5RAP1Q96SZ6 601 aaKnown RBP13.1□□□□□ -0.31
SMCO4-202ENST00000525141 GABRG3Q99928 467 aa13.1□□□□□ -0.31
SMCO4-202ENST00000525141 DCLK3Q9C098 648 aa13.1□□□□□ -0.31
SMCO4-202ENST00000525141 POLMQ9NP87 494 aaPredicted RBP13.1□□□□□ -0.31
SMCO4-202ENST00000525141 ACP6Q9NPH0 428 aa13.1□□□□□ -0.31
SMCO4-202ENST00000525141 PLCB1Q9NQ66 1216 aa13.1□□□□□ -0.31
SMCO4-202ENST00000525141 HESX1Q9UBX0 185 aa13.1□□□□□ -0.31
SMCO4-202ENST00000525141 STOML2Q9UJZ1 356 aa13.1□□□□□ -0.31
SMCO4-202ENST00000525141 CDV3Q9UKY7 258 aaKnown RBP13.1□□□□□ -0.31
SMCO4-202ENST00000525141 ZNF510Q9Y2H8 683 aa13.1□□□□□ -0.31
SMCO4-202ENST00000525141 SLC27A6Q9Y2P4 619 aa13.1□□□□□ -0.31
SMCO4-202ENST00000525141 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.09□□□□□ -0.31
SMCO4-202ENST00000525141 TCRBV21S2A2A0A5A6 115 aa13.09□□□□□ -0.31
SMCO4-202ENST00000525141 SETSIPP0DME0 302 aa13.09□□□□□ -0.31
SMCO4-202ENST00000525141 CHKAP35790 457 aa13.09□□□□□ -0.31
SMCO4-202ENST00000525141 SLC8A3P57103 927 aa13.09□□□□□ -0.31
SMCO4-202ENST00000525141 TPM4P67936 248 aa13.09□□□□□ -0.31
SMCO4-202ENST00000525141 CREB5Q02930 508 aa13.09□□□□□ -0.31
SMCO4-202ENST00000525141 STILQ15468 1287 aa13.09□□□□□ -0.31
SMCO4-202ENST00000525141 KLHDC7AQ5VTJ3 777 aa13.09□□□□□ -0.31
SMCO4-202ENST00000525141 DENND1BQ6P3S1 775 aa13.09□□□□□ -0.31
SMCO4-202ENST00000525141 SCUBE3Q8IX30 993 aa13.09□□□□□ -0.31
SMCO4-202ENST00000525141 TMEFF1Q8IYR6 380 aa13.09□□□□□ -0.31
SMCO4-202ENST00000525141 CPXM2Q8N436 756 aa13.09□□□□□ -0.31
SMCO4-202ENST00000525141 WDTC1Q8N5D0 677 aa13.09□□□□□ -0.31
SMCO4-202ENST00000525141 HMGB4Q8WW32 186 aa13.09□□□□□ -0.31
SMCO4-202ENST00000525141 SHC3Q92529 594 aa13.09□□□□□ -0.31
SMCO4-202ENST00000525141 ERGIC2Q96RQ1 377 aa13.09□□□□□ -0.31
SMCO4-202ENST00000525141 SLC6A17Q9H1V8 727 aa13.09□□□□□ -0.31
SMCO4-202ENST00000525141 CNGB3Q9NQW8 809 aa13.09□□□□□ -0.31
SMCO4-202ENST00000525141 VPS45Q9NRW7 570 aa13.09□□□□□ -0.31
SMCO4-202ENST00000525141 TMEM74BQ9NUR3 256 aa13.09□□□□□ -0.31
SMCO4-202ENST00000525141 CYTH4Q9UIA0 394 aa13.09□□□□□ -0.31
SMCO4-202ENST00000525141 DNAJC12Q9UKB3 198 aa13.09□□□□□ -0.31
SMCO4-202ENST00000525141 DAAM1Q9Y4D1 1078 aa13.09□□□□□ -0.31
SMCO4-202ENST00000525141 RAD54BQ9Y620 910 aa13.09□□□□□ -0.31
SMCO4-202ENST00000525141 GOLGA6L7A0A1B0GV03 622 aa13.08□□□□□ -0.32
SMCO4-202ENST00000525141 PATE3B3GLJ2 98 aa13.08□□□□□ -0.32
SMCO4-202ENST00000525141 GOLGA6L19H0YKK7 550 aa13.08□□□□□ -0.32
SMCO4-202ENST00000525141 TSPAN3O60637 253 aa13.08□□□□□ -0.32
SMCO4-202ENST00000525141 ALDH1A2O94788 518 aa13.08□□□□□ -0.32
SMCO4-202ENST00000525141 UCHL3P15374 230 aa13.08□□□□□ -0.32
SMCO4-202ENST00000525141 GBP1P32455 592 aa13.08□□□□□ -0.32
SMCO4-202ENST00000525141 PI4KAP42356 2102 aa13.08□□□□□ -0.32
SMCO4-202ENST00000525141 PTGER3P43115 390 aa13.08□□□□□ -0.32
SMCO4-202ENST00000525141 LIMK1P53667 647 aa13.08□□□□□ -0.32
SMCO4-202ENST00000525141 UBXN1Q04323 297 aa13.08□□□□□ -0.32
SMCO4-202ENST00000525141 ENPP2Q13822 863 aa13.08□□□□□ -0.32
SMCO4-202ENST00000525141 ARHGAP44Q17R89 818 aa13.08□□□□□ -0.32
SMCO4-202ENST00000525141 PREPLQ4J6C6 727 aaPredicted RBP13.08□□□□□ -0.32
SMCO4-202ENST00000525141 FILIP1LQ4L180 1135 aa13.08□□□□□ -0.32
SMCO4-202ENST00000525141 RSRC2Q7L4I2 434 aaKnown RBP13.08□□□□□ -0.32
SMCO4-202ENST00000525141 LUZP1Q86V48 1076 aa13.08□□□□□ -0.32
SMCO4-202ENST00000525141 IPO4Q8TEX9 1081 aaKnown RBP13.08□□□□□ -0.32
SMCO4-202ENST00000525141 ZNF606Q8WXB4 792 aa13.08□□□□□ -0.32
SMCO4-202ENST00000525141 MYEOVQ96EZ4 313 aa13.08□□□□□ -0.32
SMCO4-202ENST00000525141 MS4A3Q96HJ5 214 aa13.08□□□□□ -0.32
SMCO4-202ENST00000525141 HSFY1Q96LI6 401 aa13.08□□□□□ -0.32
SMCO4-202ENST00000525141 NAA15Q9BXJ9 866 aaKnown RBP13.08□□□□□ -0.32
SMCO4-202ENST00000525141 CD93Q9NPY3 652 aa13.08□□□□□ -0.32
SMCO4-202ENST00000525141 RTN4Q9NQC3 1192 aaKnown RBP13.08□□□□□ -0.32
SMCO4-202ENST00000525141 ABCC13Q9NSE7 274 aa13.08□□□□□ -0.32
SMCO4-202ENST00000525141 THAP10Q9P2Z0 257 aaPredicted RBP13.08□□□□□ -0.32
SMCO4-202ENST00000525141 SIK3Q9Y2K2 1263 aa13.08□□□□□ -0.32
SMCO4-202ENST00000525141 HBS1LQ9Y450 684 aaKnown RBP13.08□□□□□ -0.32
SMCO4-202ENST00000525141 FOXN3O00409 490 aaPredicted RBP13.07□□□□□ -0.32
SMCO4-202ENST00000525141 CDX4O14627 284 aaPredicted RBP13.07□□□□□ -0.32
SMCO4-202ENST00000525141 MSI1O43347 362 aaKnown RBP13.07□□□□□ -0.32
SMCO4-202ENST00000525141 IGLV3-27P01718 113 aa13.07□□□□□ -0.32
SMCO4-202ENST00000525141 KRT5P13647 590 aa13.07□□□□□ -0.32
SMCO4-202ENST00000525141 HOXB2P14652 356 aa13.07□□□□□ -0.32
SMCO4-202ENST00000525141 SGSHP51688 502 aa13.07□□□□□ -0.32
SMCO4-202ENST00000525141 ZNF445P59923 1031 aa13.07□□□□□ -0.32
SMCO4-202ENST00000525141 IRX4P78413 519 aa13.07□□□□□ -0.32
SMCO4-202ENST00000525141 ELF2Q15723 593 aa13.07□□□□□ -0.32
SMCO4-202ENST00000525141 STPG1Q5TH74 334 aa13.07□□□□□ -0.32
SMCO4-202ENST00000525141 MSANTD2Q6P1R3 559 aa13.07□□□□□ -0.32
SMCO4-202ENST00000525141 NUDT18Q6ZVK8 323 aa13.07□□□□□ -0.32
SMCO4-202ENST00000525141 KIAA0907Q7Z7F0 614 aaPredicted RBP13.07□□□□□ -0.32
SMCO4-202ENST00000525141 CHPFQ8IZ52 775 aa13.07□□□□□ -0.32
SMCO4-202ENST00000525141 PGBD3Q8N328 593 aa13.07□□□□□ -0.32
SMCO4-202ENST00000525141 DEFB119Q8N690 84 aa13.07□□□□□ -0.32
SMCO4-202ENST00000525141 SORCS1Q8WY21 1168 aa13.07□□□□□ -0.32
SMCO4-202ENST00000525141 IRGQQ8WZA9 623 aa13.07□□□□□ -0.32
SMCO4-202ENST00000525141 PLD4Q96BZ4 506 aa13.07□□□□□ -0.32
SMCO4-202ENST00000525141 LSM14BQ9BX40 385 aaKnown RBP13.07□□□□□ -0.32
SMCO4-202ENST00000525141 SLC4A5Q9BY07 1137 aa13.07□□□□□ -0.32
SMCO4-202ENST00000525141 STK33Q9BYT3 514 aa13.07□□□□□ -0.32
SMCO4-202ENST00000525141 MIS12Q9H081 205 aa13.07□□□□□ -0.32
SMCO4-202ENST00000525141 TSPY26PQ9H489 355 aa13.07□□□□□ -0.32
SMCO4-202ENST00000525141 OLA1Q9NTK5 396 aaKnown RBP13.07□□□□□ -0.32
SMCO4-202ENST00000525141 CACNA2D2Q9NY47 1150 aa13.07□□□□□ -0.32
SMCO4-202ENST00000525141 AJAP1Q9UKB5 411 aaPredicted RBP13.07□□□□□ -0.32
SMCO4-202ENST00000525141 STRIP2Q9ULQ0 834 aa13.07□□□□□ -0.32
SMCO4-202ENST00000525141 STON1Q9Y6Q2 735 aa13.07□□□□□ -0.32
SMCO4-202ENST00000525141 CEP192Q8TEP8 1941 aa13.07□□□□□ -0.32
SMCO4-202ENST00000525141 PLXND1Q9Y4D7 1925 aa13.07□□□□□ -0.32
SMCO4-202ENST00000525141 A0A1B0GTH6 734 aa13.06□□□□□ -0.32
SMCO4-202ENST00000525141 M0QYV0 167 aa13.06□□□□□ -0.32
SMCO4-202ENST00000525141 FOXD2O60548 495 aaPredicted RBP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms