RNA–Protein interactions for RNA: ENST00000525132.1

CSDE1-209, Transcript of cold shock domain containing E1, humanhuman

TSL 5

Gene CSDE1, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-209ENST00000525132 C11orf74Q86VG3 221 aa3.58□□□□□ -1.84
CSDE1-209ENST00000525132 ANKRD18AQ8IVF6 992 aa3.58□□□□□ -1.84
CSDE1-209ENST00000525132 ENAHQ8N8S7 591 aaPredicted RBP3.58□□□□□ -1.84
CSDE1-209ENST00000525132 LRGUKQ96M69 825 aa3.58□□□□□ -1.84
CSDE1-209ENST00000525132 RBM15Q96T37 977 aaKnown RBP eCLIP3.58□□□□□ -1.843e-7■■■■□ 23.4
CSDE1-209ENST00000525132 FOXB1Q99853 325 aa3.58□□□□□ -1.84
CSDE1-209ENST00000525132 ELAC2Q9BQ52 826 aaKnown RBP3.58□□□□□ -1.84
CSDE1-209ENST00000525132 BTBD2Q9BX70 525 aa3.58□□□□□ -1.84
CSDE1-209ENST00000525132 SPATC1LQ9H0A9 340 aa3.58□□□□□ -1.84
CSDE1-209ENST00000525132 RIC8BQ9NVN3 520 aa3.58□□□□□ -1.84
CSDE1-209ENST00000525132 OXSMQ9NWU1 459 aa3.58□□□□□ -1.84
CSDE1-209ENST00000525132 THG1LQ9NWX6 298 aaKnown RBP3.58□□□□□ -1.84
CSDE1-209ENST00000525132 GALNT8Q9NY28 637 aa3.58□□□□□ -1.84
CSDE1-209ENST00000525132 SAP30BPQ9UHR5 308 aaKnown RBP3.58□□□□□ -1.84
CSDE1-209ENST00000525132 ANAPC4Q9UJX5 808 aa3.58□□□□□ -1.84
CSDE1-209ENST00000525132 SPO11Q9Y5K1 396 aa3.58□□□□□ -1.84
CSDE1-209ENST00000525132 ABCA13Q86UQ4 5058 aa3.57□□□□□ -1.84
CSDE1-209ENST00000525132 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP3.57□□□□□ -1.84
CSDE1-209ENST00000525132 C19orf81C9J6K1 198 aa3.57□□□□□ -1.84
CSDE1-209ENST00000525132 SNAP23O00161 211 aa3.57□□□□□ -1.84
CSDE1-209ENST00000525132 DDX3XO00571 662 aaKnown RBP eCLIP3.57□□□□□ -1.846e-27■■■□□ 16.5
CSDE1-209ENST00000525132 ULK1O75385 1050 aa3.57□□□□□ -1.84
CSDE1-209ENST00000525132 GJB3O75712 270 aa3.57□□□□□ -1.84
CSDE1-209ENST00000525132 TCEA3O75764 348 aa3.57□□□□□ -1.84
CSDE1-209ENST00000525132 LY6G6DO95868 133 aa3.57□□□□□ -1.84
CSDE1-209ENST00000525132 PRLP01236 227 aa3.57□□□□□ -1.84
CSDE1-209ENST00000525132 BMP7P18075 431 aa3.57□□□□□ -1.84
CSDE1-209ENST00000525132 PTX3P26022 381 aaPredicted RBP3.57□□□□□ -1.84
CSDE1-209ENST00000525132 PTGER4P35408 488 aa3.57□□□□□ -1.84
CSDE1-209ENST00000525132 MCAMP43121 646 aa3.57□□□□□ -1.84
CSDE1-209ENST00000525132 KCNC1P48547 511 aa3.57□□□□□ -1.84
CSDE1-209ENST00000525132 MEOX1P50221 254 aa3.57□□□□□ -1.84
CSDE1-209ENST00000525132 KRTAP10-2P60368 255 aa3.57□□□□□ -1.84
CSDE1-209ENST00000525132 PHC1P78364 1004 aa3.57□□□□□ -1.84
CSDE1-209ENST00000525132 GFPT1Q06210 699 aaPredicted RBP3.57□□□□□ -1.84
CSDE1-209ENST00000525132 LMOD3Q0VAK6 560 aa3.57□□□□□ -1.84
CSDE1-209ENST00000525132 TEFQ10587 303 aa3.57□□□□□ -1.84
CSDE1-209ENST00000525132 ODF1Q14990 250 aa3.57□□□□□ -1.84
CSDE1-209ENST00000525132 TMEM95Q3KNT9 176 aa3.57□□□□□ -1.84
CSDE1-209ENST00000525132 PMS2CLQ68D20 193 aa3.57□□□□□ -1.84
CSDE1-209ENST00000525132 C2orf16Q68DN1 1984 aa3.57□□□□□ -1.84
CSDE1-209ENST00000525132 TRIM68Q6AZZ1 485 aa3.57□□□□□ -1.84
CSDE1-209ENST00000525132 ERAP2Q6P179 960 aa3.57□□□□□ -1.84
CSDE1-209ENST00000525132 NFRKBQ6P4R8 1299 aa3.57□□□□□ -1.84
CSDE1-209ENST00000525132 Q6ZUG5 572 aa3.57□□□□□ -1.84
CSDE1-209ENST00000525132 REXO1L1PQ8IX06 675 aa3.57□□□□□ -1.84
CSDE1-209ENST00000525132 SMAP1Q8IYB5 467 aaPredicted RBP3.57□□□□□ -1.84
CSDE1-209ENST00000525132 KLHL36Q8N4N3 616 aa3.57□□□□□ -1.84
CSDE1-209ENST00000525132 STPG3Q8N7X2 389 aa3.57□□□□□ -1.84
CSDE1-209ENST00000525132 KIAA1958Q8N8K9 716 aa3.57□□□□□ -1.84
CSDE1-209ENST00000525132 C1orf162Q8NEQ5 155 aaPredicted RBP3.57□□□□□ -1.84
CSDE1-209ENST00000525132 CXorf38Q8TB03 319 aa3.57□□□□□ -1.84
CSDE1-209ENST00000525132 CHTF18Q8WVB6 975 aa3.57□□□□□ -1.84
CSDE1-209ENST00000525132 FAM3CQ92520 227 aa3.57□□□□□ -1.84
CSDE1-209ENST00000525132 TEKT1Q969V4 418 aa3.57□□□□□ -1.84
CSDE1-209ENST00000525132 TTC17Q96AE7 1141 aa3.57□□□□□ -1.84
CSDE1-209ENST00000525132 HSPBAP1Q96EW2 488 aa3.57□□□□□ -1.84
CSDE1-209ENST00000525132 ZNF668Q96K58 619 aaPredicted RBP3.57□□□□□ -1.84
CSDE1-209ENST00000525132 ELF4Q99607 663 aaPredicted RBP3.57□□□□□ -1.84
CSDE1-209ENST00000525132 MEGF9Q9H1U4 602 aa3.57□□□□□ -1.84
CSDE1-209ENST00000525132 MROH8Q9H579 483 aa3.57□□□□□ -1.84
CSDE1-209ENST00000525132 AS3MTQ9HBK9 375 aa3.57□□□□□ -1.84
CSDE1-209ENST00000525132 WDR6Q9NNW5 1121 aaKnown RBP3.57□□□□□ -1.84
CSDE1-209ENST00000525132 CABP5Q9NP86 173 aa3.57□□□□□ -1.84
CSDE1-209ENST00000525132 EMC7Q9NPA0 242 aa3.57□□□□□ -1.84
CSDE1-209ENST00000525132 ANLNQ9NQW6 1124 aa3.57□□□□□ -1.84
CSDE1-209ENST00000525132 GJB4Q9NTQ9 266 aa3.57□□□□□ -1.84
CSDE1-209ENST00000525132 SPTLC3Q9NUV7 552 aa3.57□□□□□ -1.84
CSDE1-209ENST00000525132 MKS1Q9NXB0 559 aa3.57□□□□□ -1.84
CSDE1-209ENST00000525132 H2AFY2Q9P0M6 372 aaPredicted RBP3.57□□□□□ -1.84
CSDE1-209ENST00000525132 ARHGAP20Q9P2F6 1191 aa3.57□□□□□ -1.84
CSDE1-209ENST00000525132 LAS1LQ9Y4W2 734 aaKnown RBP3.57□□□□□ -1.84
CSDE1-209ENST00000525132 MRFAP1Q9Y605 127 aa3.57□□□□□ -1.84
CSDE1-209ENST00000525132 TRRAPQ9Y4A5 3859 aa3.56□□□□□ -1.84
CSDE1-209ENST00000525132 PARP14Q460N5 1801 aa3.56□□□□□ -1.84
CSDE1-209ENST00000525132 PRAMEF25A6NGN4 478 aa3.56□□□□□ -1.84
CSDE1-209ENST00000525132 PRSS44E7EML9 344 aa3.56□□□□□ -1.84
CSDE1-209ENST00000525132 CYP7B1O75881 506 aa3.56□□□□□ -1.84
CSDE1-209ENST00000525132 IL33O95760 270 aa3.56□□□□□ -1.84
CSDE1-209ENST00000525132 ITGB3P05106 788 aa3.56□□□□□ -1.84
CSDE1-209ENST00000525132 MYL3P08590 195 aa3.56□□□□□ -1.84
CSDE1-209ENST00000525132 RBP3P10745 1247 aa3.56□□□□□ -1.84
CSDE1-209ENST00000525132 VCAM1P19320 739 aa3.56□□□□□ -1.84
CSDE1-209ENST00000525132 HNF1BP35680 557 aa3.56□□□□□ -1.84
CSDE1-209ENST00000525132 ETV4P43268 484 aa3.56□□□□□ -1.84
CSDE1-209ENST00000525132 PPM1FP49593 454 aaPredicted RBP3.56□□□□□ -1.84
CSDE1-209ENST00000525132 KPNA1P52294 538 aaPredicted RBP3.56□□□□□ -1.84
CSDE1-209ENST00000525132 OCRLQ01968 901 aa3.56□□□□□ -1.84
CSDE1-209ENST00000525132 DUSP8Q13202 625 aa3.56□□□□□ -1.84
CSDE1-209ENST00000525132 LRRC32Q14392 662 aa3.56□□□□□ -1.84
CSDE1-209ENST00000525132 PLS1Q14651 629 aa3.56□□□□□ -1.84
CSDE1-209ENST00000525132 MYBPC3Q14896 1274 aa3.56□□□□□ -1.84
CSDE1-209ENST00000525132 WTAPQ15007 396 aa3.56□□□□□ -1.84
CSDE1-209ENST00000525132 EIF4HQ15056 248 aaKnown RBP3.56□□□□□ -1.84
CSDE1-209ENST00000525132 KRTAP24-1Q3LI83 254 aa3.56□□□□□ -1.84
CSDE1-209ENST00000525132 NT5DC1Q5TFE4 455 aa3.56□□□□□ -1.84
CSDE1-209ENST00000525132 C1orf228Q6PIY5 440 aa3.56□□□□□ -1.84
CSDE1-209ENST00000525132 CATSPERGQ6ZRH7 1159 aa3.56□□□□□ -1.84
CSDE1-209ENST00000525132 RSRC2Q7L4I2 434 aaKnown RBP3.56□□□□□ -1.84
CSDE1-209ENST00000525132 RASGRP2Q7LDG7 609 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms