RNA–Protein interactions for RNA: ENST00000524927.1

NEDD8-203, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2 BASIC

Gene NEDD8, Length 653 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-203ENST00000524927 PPP2R5AQ15172 486 aa7.75□□□□□ -1.17
NEDD8-203ENST00000524927 USH1GQ495M9 461 aa7.75□□□□□ -1.17
NEDD8-203ENST00000524927 ETV3LQ6ZN32 361 aa7.75□□□□□ -1.17
NEDD8-203ENST00000524927 FAM228AQ86W67 206 aa7.75□□□□□ -1.17
NEDD8-203ENST00000524927 SYT12Q8IV01 421 aa7.75□□□□□ -1.17
NEDD8-203ENST00000524927 NAXDQ8IW45 347 aa7.75□□□□□ -1.17
NEDD8-203ENST00000524927 CMIPQ8IY22 773 aa7.75□□□□□ -1.17
NEDD8-203ENST00000524927 CBARPQ8N350 705 aaPredicted RBP7.75□□□□□ -1.17
NEDD8-203ENST00000524927 ZSCAN18Q8TBC5 510 aaPredicted RBP7.75□□□□□ -1.17
NEDD8-203ENST00000524927 DEPDC1BQ8WUY9 529 aa7.75□□□□□ -1.17
NEDD8-203ENST00000524927 ASB15Q8WXK1 588 aa7.75□□□□□ -1.17
NEDD8-203ENST00000524927 ZBTB10Q96DT7 871 aa7.75□□□□□ -1.17
NEDD8-203ENST00000524927 FUBP3Q96I24 572 aaKnown RBP eCLIP7.75□□□□□ -1.17
NEDD8-203ENST00000524927 MBOAT7Q96N66 472 aa7.75□□□□□ -1.17
NEDD8-203ENST00000524927 PPP1R16BQ96T49 567 aa7.75□□□□□ -1.17
NEDD8-203ENST00000524927 ZFP14Q9HCL3 533 aa7.75□□□□□ -1.17
NEDD8-203ENST00000524927 STX8Q9UNK0 236 aa7.75□□□□□ -1.17
NEDD8-203ENST00000524927 GINS2Q9Y248 185 aa7.75□□□□□ -1.17
NEDD8-203ENST00000524927 PCDHA1Q9Y5I3 950 aa7.75□□□□□ -1.17
NEDD8-203ENST00000524927 KNTC1P50748 2209 aa7.74□□□□□ -1.17
NEDD8-203ENST00000524927 MYBPHLA2RUH7 354 aa7.74□□□□□ -1.17
NEDD8-203ENST00000524927 STAT5AP42229 794 aa7.74□□□□□ -1.17
NEDD8-203ENST00000524927 PI4KAP42356 2102 aa7.74□□□□□ -1.17
NEDD8-203ENST00000524927 DHPSP49366 369 aaPredicted RBP7.74□□□□□ -1.17
NEDD8-203ENST00000524927 GLUD2P49448 558 aa7.74□□□□□ -1.17
NEDD8-203ENST00000524927 YBX1P67809 324 aaKnown RBP7.74□□□□□ -1.17
NEDD8-203ENST00000524927 GFPT1Q06210 699 aaPredicted RBP7.74□□□□□ -1.17
NEDD8-203ENST00000524927 NFATC3Q12968 1075 aa7.74□□□□□ -1.17
NEDD8-203ENST00000524927 NFE2Q16621 373 aaPredicted RBP7.74□□□□□ -1.17
NEDD8-203ENST00000524927 PABPC1LQ4VXU2 614 aaKnown RBP7.74□□□□□ -1.17
NEDD8-203ENST00000524927 RALGPS2Q86X27 583 aaPredicted RBP7.74□□□□□ -1.17
NEDD8-203ENST00000524927 MARCH9Q86YJ5 346 aa7.74□□□□□ -1.17
NEDD8-203ENST00000524927 TICAM1Q8IUC6 712 aa7.74□□□□□ -1.17
NEDD8-203ENST00000524927 GPR65Q8IYL9 337 aa7.74□□□□□ -1.17
NEDD8-203ENST00000524927 FAM26EQ8N5C1 309 aa7.74□□□□□ -1.17
NEDD8-203ENST00000524927 MINDY1Q8N5J2 469 aa7.74□□□□□ -1.17
NEDD8-203ENST00000524927 CSGALNACT1Q8TDX6 532 aa7.74□□□□□ -1.17
NEDD8-203ENST00000524927 E2F7Q96AV8 911 aa7.74□□□□□ -1.17
NEDD8-203ENST00000524927 MCRS1Q96EZ8 462 aa7.74□□□□□ -1.17
NEDD8-203ENST00000524927 TUBGCP5Q96RT8 1024 aa7.74□□□□□ -1.17
NEDD8-203ENST00000524927 GTPBP2Q9BX10 602 aaKnown RBP7.74□□□□□ -1.17
NEDD8-203ENST00000524927 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP7.74□□□□□ -1.171e-6■■■□□ 15.3
NEDD8-203ENST00000524927 TBC1D13Q9NVG8 400 aa7.74□□□□□ -1.17
NEDD8-203ENST00000524927 MKS1Q9NXB0 559 aa7.74□□□□□ -1.17
NEDD8-203ENST00000524927 ASB1Q9Y576 335 aa7.74□□□□□ -1.17
NEDD8-203ENST00000524927 UBA6A0AVT1 1052 aaPredicted RBP7.73□□□□□ -1.17
NEDD8-203ENST00000524927 ZNF263O14978 683 aa7.73□□□□□ -1.17
NEDD8-203ENST00000524927 SUV39H1O43463 412 aa7.73□□□□□ -1.17
NEDD8-203ENST00000524927 AKAP10O43572 662 aa7.73□□□□□ -1.17
NEDD8-203ENST00000524927 CBFA2T3O75081 653 aa7.73□□□□□ -1.17
NEDD8-203ENST00000524927 SNUPNO95149 360 aaKnown RBP7.73□□□□□ -1.17
NEDD8-203ENST00000524927 APOL3O95236 402 aa7.73□□□□□ -1.17
NEDD8-203ENST00000524927 APBB3O95704 486 aa7.73□□□□□ -1.17
NEDD8-203ENST00000524927 LRG1P02750 347 aa7.73□□□□□ -1.17
NEDD8-203ENST00000524927 MARK3P27448 753 aa7.73□□□□□ -1.17
NEDD8-203ENST00000524927 TCF7P36402 384 aaPredicted RBP7.73□□□□□ -1.17
NEDD8-203ENST00000524927 CRYBB1P53674 252 aaPredicted RBP7.73□□□□□ -1.17
NEDD8-203ENST00000524927 TMPRSS3P57727 454 aa7.73□□□□□ -1.17
NEDD8-203ENST00000524927 TFAP4Q01664 338 aa7.73□□□□□ -1.17
NEDD8-203ENST00000524927 CREMQ03060 361 aa7.73□□□□□ -1.17
NEDD8-203ENST00000524927 DBPQ10586 325 aaPredicted RBP7.73□□□□□ -1.17
NEDD8-203ENST00000524927 PGM5Q15124 567 aa7.73□□□□□ -1.17
NEDD8-203ENST00000524927 SMAD1Q15797 465 aaKnown RBP7.73□□□□□ -1.17
NEDD8-203ENST00000524927 USP39Q53GS9 565 aaKnown RBP7.73□□□□□ -1.17
NEDD8-203ENST00000524927 PPM1LQ5SGD2 360 aa7.73□□□□□ -1.17
NEDD8-203ENST00000524927 LIN9Q5TKA1 542 aa7.73□□□□□ -1.17
NEDD8-203ENST00000524927 HIST2H2BCQ6DN03 193 aa7.73□□□□□ -1.17
NEDD8-203ENST00000524927 TIGD7Q6NT04 549 aaPredicted RBP7.73□□□□□ -1.17
NEDD8-203ENST00000524927 TEPPQ6URK8 271 aa7.73□□□□□ -1.17
NEDD8-203ENST00000524927 CD300LDQ6UXZ3 194 aa7.73□□□□□ -1.17
NEDD8-203ENST00000524927 STOX1Q6ZVD7 989 aa7.73□□□□□ -1.17
NEDD8-203ENST00000524927 ZC3H18Q86VM9 953 aaKnown RBP7.73□□□□□ -1.17
NEDD8-203ENST00000524927 MIB1Q86YT6 1006 aa7.73□□□□□ -1.17
NEDD8-203ENST00000524927 PHYKPLQ8IUZ5 450 aa7.73□□□□□ -1.17
NEDD8-203ENST00000524927 WDR75Q8IWA0 830 aaKnown RBP7.73□□□□□ -1.17
NEDD8-203ENST00000524927 WDR63Q8IWG1 891 aa7.73□□□□□ -1.17
NEDD8-203ENST00000524927 RNF168Q8IYW5 571 aaPredicted RBP7.73□□□□□ -1.17
NEDD8-203ENST00000524927 CEP76Q8TAP6 659 aa7.73□□□□□ -1.17
NEDD8-203ENST00000524927 SNRNP27Q8WVK2 155 aaKnown RBP7.73□□□□□ -1.17
NEDD8-203ENST00000524927 ING5Q8WYH8 240 aa7.73□□□□□ -1.17
NEDD8-203ENST00000524927 FAXDC2Q96IV6 333 aa7.73□□□□□ -1.17
NEDD8-203ENST00000524927 TMEM175Q9BSA9 504 aa7.73□□□□□ -1.17
NEDD8-203ENST00000524927 SMARCAD1Q9H4L7 1026 aa7.73□□□□□ -1.17
NEDD8-203ENST00000524927 UCKL1Q9NWZ5 548 aa7.73□□□□□ -1.17
NEDD8-203ENST00000524927 MAP3K20Q9NYL2 800 aaKnown RBP7.73□□□□□ -1.17
NEDD8-203ENST00000524927 ZIM2Q9NZV7 527 aa7.73□□□□□ -1.17
NEDD8-203ENST00000524927 USP36Q9P275 1121 aaKnown RBP7.73□□□□□ -1.17
NEDD8-203ENST00000524927 FNIP2Q9P278 1114 aa7.73□□□□□ -1.17
NEDD8-203ENST00000524927 DNAJB4Q9UDY4 337 aa7.73□□□□□ -1.17
NEDD8-203ENST00000524927 PLEKHB1Q9UF11 243 aaPredicted RBP7.73□□□□□ -1.17
NEDD8-203ENST00000524927 FBXW11Q9UKB1 542 aa7.73□□□□□ -1.17
NEDD8-203ENST00000524927 THADAQ6YHU6 1953 aa7.73□□□□□ -1.17
NEDD8-203ENST00000524927 CSMD1Q96PZ7 3565 aa7.72□□□□□ -1.17
NEDD8-203ENST00000524927 BOD1L1Q8NFC6 3051 aa7.72□□□□□ -1.17
NEDD8-203ENST00000524927 E2F8A0AVK6 867 aa7.72□□□□□ -1.17
NEDD8-203ENST00000524927 SPECC1L-ADORA2AF8WAN1 911 aa7.72□□□□□ -1.17
NEDD8-203ENST00000524927 GOLGA6L22H0YM25 854 aa7.72□□□□□ -1.17
NEDD8-203ENST00000524927 ALDH2P05091 517 aa7.72□□□□□ -1.17
NEDD8-203ENST00000524927 ENO2P09104 434 aaPredicted RBP7.72□□□□□ -1.17
NEDD8-203ENST00000524927 CCND2P30279 289 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms