RNA–Protein interactions for RNA: ENST00000524922.1

CD44-212, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 352 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-212ENST00000524922 TMEM232C9JQI7 657 aa2.09□□□□□ -2.07
CD44-212ENST00000524922 TBX3O15119 743 aa2.09□□□□□ -2.07
CD44-212ENST00000524922 CD3EAPO15446 510 aaKnown RBP2.09□□□□□ -2.07
CD44-212ENST00000524922 OAZ2O95190 189 aa2.09□□□□□ -2.07
CD44-212ENST00000524922 MBPP02686 304 aaPredicted RBP2.09□□□□□ -2.07
CD44-212ENST00000524922 SNHG28P0DPA3 235 aa2.09□□□□□ -2.07
CD44-212ENST00000524922 CTSAP10619 480 aa2.09□□□□□ -2.07
CD44-212ENST00000524922 PF4V1P10720 104 aa2.09□□□□□ -2.07
CD44-212ENST00000524922 TKTP29401 623 aaKnown RBP2.09□□□□□ -2.07
CD44-212ENST00000524922 MAP2K2P36507 400 aa2.09□□□□□ -2.07
CD44-212ENST00000524922 HTR6P50406 440 aa2.09□□□□□ -2.07
CD44-212ENST00000524922 MCL1Q07820 350 aa2.09□□□□□ -2.07
CD44-212ENST00000524922 FHL3Q13643 280 aa2.09□□□□□ -2.07
CD44-212ENST00000524922 CCNIQ14094 377 aa2.09□□□□□ -2.07
CD44-212ENST00000524922 ERV3-1Q14264 604 aa2.09□□□□□ -2.07
CD44-212ENST00000524922 FGL2Q14314 439 aa2.09□□□□□ -2.07
CD44-212ENST00000524922 MGAT5BQ3V5L5 792 aa2.09□□□□□ -2.07
CD44-212ENST00000524922 CERKLQ49MI3 558 aaPredicted RBP2.09□□□□□ -2.07
CD44-212ENST00000524922 DCAF12L1Q5VU92 463 aa2.09□□□□□ -2.07
CD44-212ENST00000524922 LMBRD2Q68DH5 695 aaPredicted RBP2.09□□□□□ -2.07
CD44-212ENST00000524922 SERPINA13PQ6UXR4 307 aa2.09□□□□□ -2.07
CD44-212ENST00000524922 EPM2AIP1Q7L775 607 aaPredicted RBP2.09□□□□□ -2.07
CD44-212ENST00000524922 OVCH2Q7RTZ1 564 aa2.09□□□□□ -2.07
CD44-212ENST00000524922 DENND1CQ8IV53 801 aa2.09□□□□□ -2.07
CD44-212ENST00000524922 METTL25Q8N6Q8 603 aa2.09□□□□□ -2.07
CD44-212ENST00000524922 SIRT6Q8N6T7 355 aa2.09□□□□□ -2.07
CD44-212ENST00000524922 NGDNQ8NEJ9 315 aaKnown RBP2.09□□□□□ -2.07
CD44-212ENST00000524922 MAFAQ8NHW3 353 aaPredicted RBP2.09□□□□□ -2.07
CD44-212ENST00000524922 IL31RAQ8NI17 732 aa2.09□□□□□ -2.07
CD44-212ENST00000524922 SLC35G2Q8TBE7 412 aa2.09□□□□□ -2.07
CD44-212ENST00000524922 PPP2R3CQ969Q6 453 aa2.09□□□□□ -2.07
CD44-212ENST00000524922 MTFMTQ96DP5 389 aaKnown RBP2.09□□□□□ -2.07
CD44-212ENST00000524922 AIFM3Q96NN9 605 aa2.09□□□□□ -2.07
CD44-212ENST00000524922 PRAM1Q96QH2 718 aa2.09□□□□□ -2.07
CD44-212ENST00000524922 ACO2Q99798 780 aaKnown RBP2.09□□□□□ -2.07
CD44-212ENST00000524922 VN1R3Q9BXE9 311 aa2.09□□□□□ -2.07
CD44-212ENST00000524922 MS4A7Q9GZW8 240 aaPredicted RBP2.09□□□□□ -2.07
CD44-212ENST00000524922 TRMT13Q9NUP7 481 aaKnown RBP2.09□□□□□ -2.07
CD44-212ENST00000524922 TFCP2L1Q9NZI6 479 aa2.09□□□□□ -2.07
CD44-212ENST00000524922 IP6K2Q9UHH9 426 aa2.09□□□□□ -2.07
CD44-212ENST00000524922 VPS51Q9UID3 782 aa2.09□□□□□ -2.07
CD44-212ENST00000524922 ASAP1Q9ULH1 1129 aa2.09□□□□□ -2.07
CD44-212ENST00000524922 ANKRD6Q9Y2G4 727 aa2.09□□□□□ -2.07
CD44-212ENST00000524922 ARFGEF1Q9Y6D6 1849 aa2.09□□□□□ -2.08
CD44-212ENST00000524922 USP47Q96K76 1375 aa2.09□□□□□ -2.08
CD44-212ENST00000524922 C5P01031 1676 aa2.09□□□□□ -2.08
CD44-212ENST00000524922 SPTBN5Q9NRC6 3674 aaKnown RBP2.09□□□□□ -2.08
CD44-212ENST00000524922 SZT2Q5T011 3432 aa2.08□□□□□ -2.08
CD44-212ENST00000524922 TNRC18O15417 2968 aaPredicted RBP2.08□□□□□ -2.08
CD44-212ENST00000524922 A0A1W2PPC1 479 aa2.08□□□□□ -2.08
CD44-212ENST00000524922 MYMKA6NI61 221 aa2.08□□□□□ -2.08
CD44-212ENST00000524922 CD8B2A6NJW9 211 aa2.08□□□□□ -2.08
CD44-212ENST00000524922 C16orf96A6NNT2 1141 aa2.08□□□□□ -2.08
CD44-212ENST00000524922 DSCR3O14972 297 aa2.08□□□□□ -2.08
CD44-212ENST00000524922 AP1G1O43747 822 aa2.08□□□□□ -2.08
CD44-212ENST00000524922 RRP9O43818 475 aaKnown RBP2.08□□□□□ -2.08
CD44-212ENST00000524922 TUSC2O75896 110 aa2.08□□□□□ -2.08
CD44-212ENST00000524922 TMEM191BP0C7N4 346 aa2.08□□□□□ -2.08
CD44-212ENST00000524922 KITP10721 976 aa2.08□□□□□ -2.08
CD44-212ENST00000524922 HSPA8P11142 646 aaKnown RBP2.08□□□□□ -2.08
CD44-212ENST00000524922 PSG1P11464 419 aa2.08□□□□□ -2.08
CD44-212ENST00000524922 CYP19A1P11511 503 aaPredicted RBP2.08□□□□□ -2.08
CD44-212ENST00000524922 XRCC6P12956 609 aaKnown RBP eCLIP2.08□□□□□ -2.08
CD44-212ENST00000524922 IL1R1P14778 569 aa2.08□□□□□ -2.08
CD44-212ENST00000524922 YPEL5P62699 121 aa2.08□□□□□ -2.08
CD44-212ENST00000524922 GHRHRQ02643 423 aa2.08□□□□□ -2.08
CD44-212ENST00000524922 KRT17Q04695 432 aa2.08□□□□□ -2.08
CD44-212ENST00000524922 DEUP1Q05D60 604 aa2.08□□□□□ -2.08
CD44-212ENST00000524922 MLC1Q15049 377 aa2.08□□□□□ -2.08
CD44-212ENST00000524922 PKN2Q16513 984 aaKnown RBP2.08□□□□□ -2.08
CD44-212ENST00000524922 UBAP2Q5T6F2 1119 aaKnown RBP2.08□□□□□ -2.08
CD44-212ENST00000524922 RANBP10Q6VN20 620 aa2.08□□□□□ -2.08
CD44-212ENST00000524922 TOM1L2Q6ZVM7 507 aa2.08□□□□□ -2.08
CD44-212ENST00000524922 ZBTB46Q86UZ6 589 aa2.08□□□□□ -2.08
CD44-212ENST00000524922 SUGP2Q8IX01 1082 aaKnown RBP eCLIP2.08□□□□□ -2.08
CD44-212ENST00000524922 CHPFQ8IZ52 775 aa2.08□□□□□ -2.08
CD44-212ENST00000524922 KRT78Q8N1N4 520 aa2.08□□□□□ -2.08
CD44-212ENST00000524922 SPATA3Q8NHX4 192 aa2.08□□□□□ -2.08
CD44-212ENST00000524922 OSR1Q8TAX0 266 aaPredicted RBP2.08□□□□□ -2.08
CD44-212ENST00000524922 DNAJB14Q8TBM8 379 aa2.08□□□□□ -2.08
CD44-212ENST00000524922 NSMCE1Q8WV22 266 aa2.08□□□□□ -2.08
CD44-212ENST00000524922 RAPGEF4Q8WZA2 1011 aa2.08□□□□□ -2.08
CD44-212ENST00000524922 MSI2Q96DH6 328 aaKnown RBP2.08□□□□□ -2.08
CD44-212ENST00000524922 ZFYVE19Q96K21 471 aa2.08□□□□□ -2.08
CD44-212ENST00000524922 PPP1R10Q96QC0 940 aaKnown RBP2.08□□□□□ -2.08
CD44-212ENST00000524922 C22orf23Q9BZE7 217 aa2.08□□□□□ -2.08
CD44-212ENST00000524922 FOXP1Q9H334 677 aaPredicted RBP2.08□□□□□ -2.08
CD44-212ENST00000524922 AGO4Q9HCK5 861 aaKnown RBP2.08□□□□□ -2.08
CD44-212ENST00000524922 TRIM36Q9NQ86 728 aa2.08□□□□□ -2.08
CD44-212ENST00000524922 HOMER2Q9NSB8 354 aa2.08□□□□□ -2.08
CD44-212ENST00000524922 RIMKLBQ9ULI2 386 aa2.08□□□□□ -2.08
CD44-212ENST00000524922 ACEP12821 1306 aa2.08□□□□□ -2.08
CD44-212ENST00000524922 CDHR2Q9BYE9 1310 aa2.08□□□□□ -2.08
CD44-212ENST00000524922 PKD1L3Q7Z443 1732 aa2.08□□□□□ -2.08
CD44-212ENST00000524922 KIAA1551Q9HCM1 1747 aa2.08□□□□□ -2.08
CD44-212ENST00000524922 BTAF1O14981 1849 aa2.07□□□□□ -2.08
CD44-212ENST00000524922 VCANP13611 3396 aa2.07□□□□□ -2.08
CD44-212ENST00000524922 BRCA1P38398 1863 aaKnown RBP2.07□□□□□ -2.08
CD44-212ENST00000524922 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP2.07□□□□□ -2.08
CD44-212ENST00000524922 A0A0G2JK05 382 aa2.07□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms