RNA–Protein interactions for RNA: ENST00000524895.5

TSPAN4-213, Transcript of tetraspanin 4, humanhuman

TSL 4

Gene TSPAN4, Length 401 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-213ENST00000524895 LRRD1A4D1F6 860 aa16.43■□□□□ 0.22
TSPAN4-213ENST00000524895 HARS2P49590 506 aaKnown RBP16.43■□□□□ 0.22
TSPAN4-213ENST00000524895 PEX5P50542 639 aa16.43■□□□□ 0.22
TSPAN4-213ENST00000524895 KCNQ1P51787 676 aa16.43■□□□□ 0.22
TSPAN4-213ENST00000524895 MTA1Q13330 715 aa16.43■□□□□ 0.22
TSPAN4-213ENST00000524895 KRT81Q14533 505 aa16.43■□□□□ 0.22
TSPAN4-213ENST00000524895 ATP13A4Q4VNC1 1196 aa16.43■□□□□ 0.22
TSPAN4-213ENST00000524895 DDX42Q86XP3 938 aaKnown RBP eCLIP16.43■□□□□ 0.22
TSPAN4-213ENST00000524895 PSTKQ8IV42 348 aaKnown RBP16.43■□□□□ 0.22
TSPAN4-213ENST00000524895 CCDC50Q8IVM0 306 aa16.43■□□□□ 0.22
TSPAN4-213ENST00000524895 UNC45BQ8IWX7 931 aa16.43■□□□□ 0.22
TSPAN4-213ENST00000524895 NPAS3Q8IXF0 933 aa16.43■□□□□ 0.22
TSPAN4-213ENST00000524895 ATP6V0D2Q8N8Y2 350 aa16.43■□□□□ 0.22
TSPAN4-213ENST00000524895 KCTD6Q8NC69 237 aa16.43■□□□□ 0.22
TSPAN4-213ENST00000524895 SMRP1Q8NCR6 262 aa16.43■□□□□ 0.22
TSPAN4-213ENST00000524895 TTC16Q8NEE8 873 aa16.43■□□□□ 0.22
TSPAN4-213ENST00000524895 KIF18AQ8NI77 898 aa16.43■□□□□ 0.22
TSPAN4-213ENST00000524895 PPM1EQ8WY54 764 aa16.43■□□□□ 0.22
TSPAN4-213ENST00000524895 RBM41Q96IZ5 413 aaKnown RBP16.43■□□□□ 0.22
TSPAN4-213ENST00000524895 ZFRQ96KR1 1074 aaKnown RBP16.43■□□□□ 0.22
TSPAN4-213ENST00000524895 SMG9Q9H0W8 520 aaKnown RBP16.43■□□□□ 0.22
TSPAN4-213ENST00000524895 DHX35Q9H5Z1 703 aaKnown RBP16.43■□□□□ 0.22
TSPAN4-213ENST00000524895 TMPRSS4Q9NRS4 437 aa16.43■□□□□ 0.22
TSPAN4-213ENST00000524895 GKN1Q9NS71 199 aa16.43■□□□□ 0.22
TSPAN4-213ENST00000524895 MTMR10Q9NXD2 777 aa16.43■□□□□ 0.22
TSPAN4-213ENST00000524895 ARHGAP26Q9UNA1 814 aa16.43■□□□□ 0.22
TSPAN4-213ENST00000524895 KCNU1A8MYU2 1149 aa16.42■□□□□ 0.22
TSPAN4-213ENST00000524895 H3BQ06 376 aaPredicted RBP16.42■□□□□ 0.22
TSPAN4-213ENST00000524895 PAGE1O75459 146 aa16.42■□□□□ 0.22
TSPAN4-213ENST00000524895 STC2O76061 302 aa16.42■□□□□ 0.22
TSPAN4-213ENST00000524895 ZRANB2O95218 330 aaKnown RBP eCLIP16.42■□□□□ 0.22
TSPAN4-213ENST00000524895 CDH6P55285 790 aa16.42■□□□□ 0.22
TSPAN4-213ENST00000524895 CBX2Q14781 532 aaPredicted RBP16.42■□□□□ 0.22
TSPAN4-213ENST00000524895 PAPD7Q5XG87 772 aaKnown RBP16.42■□□□□ 0.22
TSPAN4-213ENST00000524895 EXD1Q8NHP7 514 aa16.42■□□□□ 0.22
TSPAN4-213ENST00000524895 ZSCAN18Q8TBC5 510 aaPredicted RBP16.42■□□□□ 0.22
TSPAN4-213ENST00000524895 FGF13Q92913 245 aa16.42■□□□□ 0.22
TSPAN4-213ENST00000524895 BTN2A3PQ96KV6 586 aa16.42■□□□□ 0.22
TSPAN4-213ENST00000524895 NECTIN4Q96NY8 510 aa16.42■□□□□ 0.22
TSPAN4-213ENST00000524895 HAPLN3Q96S86 360 aa16.42■□□□□ 0.22
TSPAN4-213ENST00000524895 OSBPL9Q96SU4 736 aa16.42■□□□□ 0.22
TSPAN4-213ENST00000524895 CARD9Q9H257 536 aa16.42■□□□□ 0.22
TSPAN4-213ENST00000524895 UBE2ZQ9H832 354 aaPredicted RBP16.42■□□□□ 0.22
TSPAN4-213ENST00000524895 ANLNQ9NQW6 1124 aa16.42■□□□□ 0.22
TSPAN4-213ENST00000524895 CFAP97Q9P2B7 532 aa16.42■□□□□ 0.22
TSPAN4-213ENST00000524895 LSM7Q9UK45 103 aaKnown RBP16.42■□□□□ 0.22
TSPAN4-213ENST00000524895 SH3BP1Q9Y3L3 701 aa16.42■□□□□ 0.22
TSPAN4-213ENST00000524895 SAR1BQ9Y6B6 198 aa16.42■□□□□ 0.22
TSPAN4-213ENST00000524895 REV3LO60673 3130 aa16.41■□□□□ 0.22
TSPAN4-213ENST00000524895 HELZP42694 1942 aaKnown RBP16.41■□□□□ 0.22
TSPAN4-213ENST00000524895 PI4K2BG5E9Z4 385 aa16.41■□□□□ 0.22
TSPAN4-213ENST00000524895 I6L893 689 aaPredicted RBP16.41■□□□□ 0.22
TSPAN4-213ENST00000524895 TCP1P17987 556 aaKnown RBP16.41■□□□□ 0.22
TSPAN4-213ENST00000524895 KCNA5P22460 613 aa16.41■□□□□ 0.22
TSPAN4-213ENST00000524895 CORO1AP31146 461 aaKnown RBP16.41■□□□□ 0.22
TSPAN4-213ENST00000524895 CXCR5P32302 372 aa16.41■□□□□ 0.22
TSPAN4-213ENST00000524895 CETN2P41208 172 aa16.41■□□□□ 0.22
TSPAN4-213ENST00000524895 SLC11A2P49281 568 aa16.41■□□□□ 0.22
TSPAN4-213ENST00000524895 ZNF211Q13398 564 aaPredicted RBP16.41■□□□□ 0.22
TSPAN4-213ENST00000524895 PDK2Q15119 407 aa16.41■□□□□ 0.22
TSPAN4-213ENST00000524895 DPYSL2Q16555 572 aa16.41■□□□□ 0.22
TSPAN4-213ENST00000524895 CA9Q16790 459 aa16.41■□□□□ 0.22
TSPAN4-213ENST00000524895 PPP6R3Q5H9R7 873 aaPredicted RBP16.41■□□□□ 0.22
TSPAN4-213ENST00000524895 SEL1L2Q5TEA6 688 aa16.41■□□□□ 0.22
TSPAN4-213ENST00000524895 DCAF12L1Q5VU92 463 aa16.41■□□□□ 0.22
TSPAN4-213ENST00000524895 MAP7D3Q8IWC1 876 aa16.41■□□□□ 0.22
TSPAN4-213ENST00000524895 RCOR2Q8IZ40 523 aa16.41■□□□□ 0.22
TSPAN4-213ENST00000524895 RAPGEF5Q92565 580 aa16.41■□□□□ 0.22
TSPAN4-213ENST00000524895 USP13Q92995 863 aaPredicted RBP16.41■□□□□ 0.22
TSPAN4-213ENST00000524895 RNF25Q96BH1 459 aaPredicted RBP16.41■□□□□ 0.22
TSPAN4-213ENST00000524895 ZSWIM3Q96MP5 696 aa16.41■□□□□ 0.22
TSPAN4-213ENST00000524895 KCTD15Q96SI1 283 aaPredicted RBP16.41■□□□□ 0.22
TSPAN4-213ENST00000524895 CALN1Q9BXU9 219 aa16.41■□□□□ 0.22
TSPAN4-213ENST00000524895 DCLK3Q9C098 648 aa16.41■□□□□ 0.22
TSPAN4-213ENST00000524895 TDP1Q9NUW8 608 aa16.41■□□□□ 0.22
TSPAN4-213ENST00000524895 GDE1Q9NZC3 331 aa16.41■□□□□ 0.22
TSPAN4-213ENST00000524895 USP15Q9Y4E8 981 aaPredicted RBP16.41■□□□□ 0.22
TSPAN4-213ENST00000524895 SZT2Q5T011 3432 aa16.4■□□□□ 0.22
TSPAN4-213ENST00000524895 DOCK6Q96HP0 2047 aa16.4■□□□□ 0.22
TSPAN4-213ENST00000524895 LEFTY2O00292 366 aa16.4■□□□□ 0.22
TSPAN4-213ENST00000524895 PRAMEF12O95522 483 aa16.4■□□□□ 0.22
TSPAN4-213ENST00000524895 PYGMP11217 842 aa16.4■□□□□ 0.22
TSPAN4-213ENST00000524895 KDELR1P24390 212 aa16.4■□□□□ 0.22
TSPAN4-213ENST00000524895 DENND1CQ8IV53 801 aa16.4■□□□□ 0.22
TSPAN4-213ENST00000524895 ARID3BQ8IVW6 561 aaPredicted RBP16.4■□□□□ 0.22
TSPAN4-213ENST00000524895 PYROXD2Q8N2H3 581 aa16.4■□□□□ 0.22
TSPAN4-213ENST00000524895 SH3RF2Q8TEC5 729 aa16.4■□□□□ 0.22
TSPAN4-213ENST00000524895 PBKQ96KB5 322 aa16.4■□□□□ 0.22
TSPAN4-213ENST00000524895 EPAS1Q99814 870 aa16.4■□□□□ 0.22
TSPAN4-213ENST00000524895 SIK2Q9H0K1 926 aa16.4■□□□□ 0.22
TSPAN4-213ENST00000524895 OSBPL2Q9H1P3 480 aa16.4■□□□□ 0.22
TSPAN4-213ENST00000524895 POMKQ9H5K3 350 aa16.4■□□□□ 0.22
TSPAN4-213ENST00000524895 KIF9Q9HAQ2 790 aa16.4■□□□□ 0.22
TSPAN4-213ENST00000524895 PCDH18Q9HCL0 1135 aa16.4■□□□□ 0.22
TSPAN4-213ENST00000524895 XPO7Q9UIA9 1087 aaKnown RBP16.4■□□□□ 0.22
TSPAN4-213ENST00000524895 CDH7Q9ULB5 785 aa16.4■□□□□ 0.22
TSPAN4-213ENST00000524895 CCL26Q9Y258 94 aa16.4■□□□□ 0.22
TSPAN4-213ENST00000524895 HS3ST4Q9Y661 456 aa16.4■□□□□ 0.22
TSPAN4-213ENST00000524895 DENND4AQ7Z401 1863 aa16.39■□□□□ 0.22
TSPAN4-213ENST00000524895 NUP210Q8TEM1 1887 aaPredicted RBP16.39■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms