RNA–Protein interactions for RNA: ENST00000524652.1

CSDE1-208, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-208ENST00000524652 MOGAT1Q96PD6 335 aa3.53□□□□□ -1.84
CSDE1-208ENST00000524652 PSMD1Q99460 953 aa3.53□□□□□ -1.84
CSDE1-208ENST00000524652 MPHOSPH8Q99549 860 aa3.53□□□□□ -1.84
CSDE1-208ENST00000524652 SMAD5Q99717 465 aaKnown RBP3.53□□□□□ -1.84
CSDE1-208ENST00000524652 PTDSS2Q9BVG9 487 aa3.53□□□□□ -1.84
CSDE1-208ENST00000524652 TTYH3Q9C0H2 523 aa3.53□□□□□ -1.84
CSDE1-208ENST00000524652 GLOD4Q9HC38 313 aa3.53□□□□□ -1.84
CSDE1-208ENST00000524652 CNNM1Q9NRU3 951 aa3.53□□□□□ -1.84
CSDE1-208ENST00000524652 DBNLQ9UJU6 430 aaKnown RBP3.53□□□□□ -1.84
CSDE1-208ENST00000524652 SERTAD3Q9UJW9 196 aa3.53□□□□□ -1.84
CSDE1-208ENST00000524652 SSX2IPQ9Y2D8 614 aa3.53□□□□□ -1.84
CSDE1-208ENST00000524652 PLEKHM1Q9Y4G2 1056 aa3.53□□□□□ -1.84
CSDE1-208ENST00000524652 PCDHA1Q9Y5I3 950 aa3.53□□□□□ -1.84
CSDE1-208ENST00000524652 TRPM7Q96QT4 1865 aa3.53□□□□□ -1.84
CSDE1-208ENST00000524652 ATAD5Q96QE3 1844 aa3.53□□□□□ -1.84
CSDE1-208ENST00000524652 PAPPA2Q9BXP8 1791 aa3.53□□□□□ -1.84
CSDE1-208ENST00000524652 OTOFQ9HC10 1997 aa3.52□□□□□ -1.85
CSDE1-208ENST00000524652 TRANK1O15050 2925 aa3.52□□□□□ -1.85
CSDE1-208ENST00000524652 MROH5Q6ZUA9 1318 aa3.52□□□□□ -1.85
CSDE1-208ENST00000524652 ZNF541Q9H0D2 1346 aa3.52□□□□□ -1.85
CSDE1-208ENST00000524652 FESP07332 822 aa3.52□□□□□ -1.85
CSDE1-208ENST00000524652 CYP2D6P10635 497 aa3.52□□□□□ -1.85
CSDE1-208ENST00000524652 ENGP17813 658 aa3.52□□□□□ -1.85
CSDE1-208ENST00000524652 AKAP5P24588 427 aa3.52□□□□□ -1.85
CSDE1-208ENST00000524652 IL15P40933 162 aaPredicted RBP3.52□□□□□ -1.85
CSDE1-208ENST00000524652 SOX8P57073 446 aa3.52□□□□□ -1.85
CSDE1-208ENST00000524652 LILRA4P59901 499 aa3.52□□□□□ -1.85
CSDE1-208ENST00000524652 KRTAP10-9P60411 292 aa3.52□□□□□ -1.85
CSDE1-208ENST00000524652 CYP4F2P78329 520 aa3.52□□□□□ -1.85
CSDE1-208ENST00000524652 HOXA4Q00056 320 aaPredicted RBP3.52□□□□□ -1.85
CSDE1-208ENST00000524652 SATB1Q01826 763 aa3.52□□□□□ -1.85
CSDE1-208ENST00000524652 G3BP1Q13283 466 aaKnown RBP eCLIP3.52□□□□□ -1.85
CSDE1-208ENST00000524652 UBE4AQ14139 1066 aa3.52□□□□□ -1.85
CSDE1-208ENST00000524652 PLS1Q14651 629 aa3.52□□□□□ -1.85
CSDE1-208ENST00000524652 GPR162Q16538 588 aa3.52□□□□□ -1.85
CSDE1-208ENST00000524652 SUPT20HL1Q3ZLR7 823 aa3.52□□□□□ -1.85
CSDE1-208ENST00000524652 ARHGAP40Q5TG30 622 aa3.52□□□□□ -1.85
CSDE1-208ENST00000524652 MTHFD1LQ6UB35 978 aa3.52□□□□□ -1.85
CSDE1-208ENST00000524652 CATSPERGQ6ZRH7 1159 aa3.52□□□□□ -1.85
CSDE1-208ENST00000524652 C15orf52Q6ZUT6 534 aaKnown RBP3.52□□□□□ -1.85
CSDE1-208ENST00000524652 PARS2Q7L3T8 475 aaKnown RBP3.52□□□□□ -1.85
CSDE1-208ENST00000524652 GALNT16Q8N428 558 aa3.52□□□□□ -1.85
CSDE1-208ENST00000524652 MTFMTQ96DP5 389 aaKnown RBP3.52□□□□□ -1.85
CSDE1-208ENST00000524652 FAM84BQ96KN1 310 aaPredicted RBP3.52□□□□□ -1.85
CSDE1-208ENST00000524652 NUP88Q99567 741 aaPredicted RBP3.52□□□□□ -1.85
CSDE1-208ENST00000524652 MXD3Q9BW11 206 aa3.52□□□□□ -1.85
CSDE1-208ENST00000524652 PRSS22Q9GZN4 317 aa3.52□□□□□ -1.85
CSDE1-208ENST00000524652 TAOK3Q9H2K8 898 aa3.52□□□□□ -1.85
CSDE1-208ENST00000524652 DBNDD1Q9H9R9 158 aa3.52□□□□□ -1.85
CSDE1-208ENST00000524652 ADAMTS5Q9UNA0 930 aa3.52□□□□□ -1.85
CSDE1-208ENST00000524652 BAHCC1Q9P281 2608 aa3.51□□□□□ -1.85
CSDE1-208ENST00000524652 A1L4Q6 167 aa3.51□□□□□ -1.85
CSDE1-208ENST00000524652 H3BUI4 141 aa3.51□□□□□ -1.85
CSDE1-208ENST00000524652 IKBKBO14920 756 aa3.51□□□□□ -1.85
CSDE1-208ENST00000524652 ERC2O15083 957 aa3.51□□□□□ -1.85
CSDE1-208ENST00000524652 PPIP5K2O43314 1243 aa3.51□□□□□ -1.85
CSDE1-208ENST00000524652 ECE2O60344 883 aa3.51□□□□□ -1.85
CSDE1-208ENST00000524652 HMMRO75330 724 aa3.51□□□□□ -1.85
CSDE1-208ENST00000524652 UNC5CO95185 931 aa3.51□□□□□ -1.85
CSDE1-208ENST00000524652 IL33O95760 270 aa3.51□□□□□ -1.85
CSDE1-208ENST00000524652 TOP3BO95985 862 aaKnown RBP3.51□□□□□ -1.85
CSDE1-208ENST00000524652 GRPP07492 148 aa3.51□□□□□ -1.85
CSDE1-208ENST00000524652 IL1R1P14778 569 aa3.51□□□□□ -1.85
CSDE1-208ENST00000524652 VCAM1P19320 739 aa3.51□□□□□ -1.85
CSDE1-208ENST00000524652 TPTEP56180 551 aa3.51□□□□□ -1.85
CSDE1-208ENST00000524652 NUCB1Q02818 461 aa3.51□□□□□ -1.85
CSDE1-208ENST00000524652 E2F2Q14209 437 aa3.51□□□□□ -1.85
CSDE1-208ENST00000524652 PUM3Q15397 648 aaKnown RBP3.51□□□□□ -1.85
CSDE1-208ENST00000524652 CCDC157Q569K6 752 aa3.51□□□□□ -1.85
CSDE1-208ENST00000524652 ANKRD45Q5TZF3 282 aa3.51□□□□□ -1.85
CSDE1-208ENST00000524652 RGS7BPQ6MZT1 257 aaPredicted RBP3.51□□□□□ -1.85
CSDE1-208ENST00000524652 TRIM72Q6ZMU5 477 aa3.51□□□□□ -1.85
CSDE1-208ENST00000524652 CATIPQ7Z7H3 387 aa3.51□□□□□ -1.85
CSDE1-208ENST00000524652 AACSQ86V21 672 aa3.51□□□□□ -1.85
CSDE1-208ENST00000524652 CHSY1Q86X52 802 aa3.51□□□□□ -1.85
CSDE1-208ENST00000524652 CERS5Q8N5B7 392 aa3.51□□□□□ -1.85
CSDE1-208ENST00000524652 TDRD7Q8NHU6 1098 aaKnown RBP3.51□□□□□ -1.85
CSDE1-208ENST00000524652 CYP2W1Q8TAV3 490 aa3.51□□□□□ -1.85
CSDE1-208ENST00000524652 SOCS4Q8WXH5 440 aa3.51□□□□□ -1.85
CSDE1-208ENST00000524652 GLG1Q92896 1179 aa3.51□□□□□ -1.85
CSDE1-208ENST00000524652 ZBTB9Q96C00 473 aa3.51□□□□□ -1.85
CSDE1-208ENST00000524652 CHMP4CQ96CF2 233 aa3.51□□□□□ -1.85
CSDE1-208ENST00000524652 GCC1Q96CN9 775 aa3.51□□□□□ -1.85
CSDE1-208ENST00000524652 KIF1BPQ96EK5 621 aa3.51□□□□□ -1.85
CSDE1-208ENST00000524652 HSPBAP1Q96EW2 488 aa3.51□□□□□ -1.85
CSDE1-208ENST00000524652 MVB12AQ96EY5 273 aa3.51□□□□□ -1.85
CSDE1-208ENST00000524652 EDC3Q96F86 508 aaKnown RBP3.51□□□□□ -1.85
CSDE1-208ENST00000524652 CDK5RAP3Q96JB5 506 aa3.51□□□□□ -1.85
CSDE1-208ENST00000524652 ASB2Q96Q27 587 aa3.51□□□□□ -1.85
CSDE1-208ENST00000524652 QTRT1Q9BXR0 403 aaKnown RBP3.51□□□□□ -1.85
CSDE1-208ENST00000524652 GTPBP4Q9BZE4 634 aaKnown RBP3.51□□□□□ -1.85
CSDE1-208ENST00000524652 LRRCC1Q9C099 1032 aa3.51□□□□□ -1.85
CSDE1-208ENST00000524652 ANKRD2Q9GZV1 360 aa3.51□□□□□ -1.85
CSDE1-208ENST00000524652 CHMP4BQ9H444 224 aaKnown RBP3.51□□□□□ -1.85
CSDE1-208ENST00000524652 TCF7L1Q9HCS4 588 aa3.51□□□□□ -1.85
CSDE1-208ENST00000524652 CD209Q9NNX6 404 aa3.51□□□□□ -1.85
CSDE1-208ENST00000524652 SARS2Q9NP81 518 aaKnown RBP3.51□□□□□ -1.85
CSDE1-208ENST00000524652 GPR108Q9NPR9 543 aa3.51□□□□□ -1.85
CSDE1-208ENST00000524652 TUBA8Q9NY65 449 aaPredicted RBP3.51□□□□□ -1.85
CSDE1-208ENST00000524652 NDRG4Q9ULP0 352 aaKnown RBP3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms