RNA–Protein interactions for RNA: ENST00000523961.5

CCNC-216, Transcript of cyclin C, humanhuman

TSL 5

Gene CCNC, Length 1,152 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-216ENST00000523961 IRX2Q9BZI1 471 aaPredicted RBP13.02□□□□□ -0.33
CCNC-216ENST00000523961 DNAJC17Q9NVM6 304 aaKnown RBP13.02□□□□□ -0.33
CCNC-216ENST00000523961 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.02□□□□□ -0.33
CCNC-216ENST00000523961 RAPGEFL1Q9UHV5 662 aa13.02□□□□□ -0.33
CCNC-216ENST00000523961 SLC12A6Q9UHW9 1150 aa13.02□□□□□ -0.33
CCNC-216ENST00000523961 TMEM59LQ9UK28 342 aa13.02□□□□□ -0.33
CCNC-216ENST00000523961 BZW2Q9Y6E2 419 aaKnown RBP13.02□□□□□ -0.33
CCNC-216ENST00000523961 A0A0A0MRY4 1105 aa13.01□□□□□ -0.33
CCNC-216ENST00000523961 M0QYT0 321 aa13.01□□□□□ -0.33
CCNC-216ENST00000523961 ATG13O75143 517 aa13.01□□□□□ -0.33
CCNC-216ENST00000523961 RNF40O75150 1001 aa13.01□□□□□ -0.33
CCNC-216ENST00000523961 KAT7O95251 611 aa13.01□□□□□ -0.33
CCNC-216ENST00000523961 F9P00740 461 aa13.01□□□□□ -0.33
CCNC-216ENST00000523961 GYPCP04921 128 aa13.01□□□□□ -0.33
CCNC-216ENST00000523961 CCR1P32246 355 aa13.01□□□□□ -0.33
CCNC-216ENST00000523961 CCR3P51677 355 aa13.01□□□□□ -0.33
CCNC-216ENST00000523961 GSCP56915 257 aaPredicted RBP13.01□□□□□ -0.33
CCNC-216ENST00000523961 KDSRQ06136 332 aa13.01□□□□□ -0.33
CCNC-216ENST00000523961 TCF15Q12870 199 aa13.01□□□□□ -0.33
CCNC-216ENST00000523961 PTP4A2Q12974 167 aa13.01□□□□□ -0.33
CCNC-216ENST00000523961 MTA1Q13330 715 aa13.01□□□□□ -0.33
CCNC-216ENST00000523961 GAS6Q14393 721 aa13.01□□□□□ -0.33
CCNC-216ENST00000523961 PPP2R5DQ14738 602 aa13.01□□□□□ -0.33
CCNC-216ENST00000523961 ZC3H12AQ5D1E8 599 aaKnown RBP13.01□□□□□ -0.33
CCNC-216ENST00000523961 FYB2Q5VWT5 728 aa13.01□□□□□ -0.33
CCNC-216ENST00000523961 SPECC1LQ69YQ0 1117 aa13.01□□□□□ -0.33
CCNC-216ENST00000523961 GRAMD4Q6IC98 578 aa13.01□□□□□ -0.33
CCNC-216ENST00000523961 ACAD10Q6JQN1 1059 aa13.01□□□□□ -0.33
CCNC-216ENST00000523961 SARM1Q6SZW1 724 aa13.01□□□□□ -0.33
CCNC-216ENST00000523961 Q6ZS52 159 aa13.01□□□□□ -0.33
CCNC-216ENST00000523961 MON1BQ7L1V2 547 aa13.01□□□□□ -0.33
CCNC-216ENST00000523961 ZNF571Q7Z3V5 609 aaPredicted RBP13.01□□□□□ -0.33
CCNC-216ENST00000523961 PHTF2Q8N3S3 785 aa13.01□□□□□ -0.33
CCNC-216ENST00000523961 ATP6V0D2Q8N8Y2 350 aa13.01□□□□□ -0.33
CCNC-216ENST00000523961 DDI1Q8WTU0 396 aa13.01□□□□□ -0.33
CCNC-216ENST00000523961 EZH1Q92800 747 aaPredicted RBP13.01□□□□□ -0.33
CCNC-216ENST00000523961 BHMTQ93088 406 aa13.01□□□□□ -0.33
CCNC-216ENST00000523961 RNF34Q969K3 372 aa13.01□□□□□ -0.33
CCNC-216ENST00000523961 TMA16Q96EY4 203 aaKnown RBP13.01□□□□□ -0.33
CCNC-216ENST00000523961 BTN2A3PQ96KV6 586 aa13.01□□□□□ -0.33
CCNC-216ENST00000523961 METTL5Q9NRN9 209 aaKnown RBP13.01□□□□□ -0.33
CCNC-216ENST00000523961 PLK2Q9NYY3 685 aa13.01□□□□□ -0.33
CCNC-216ENST00000523961 FBXO10Q9UK96 956 aa13.01□□□□□ -0.33
CCNC-216ENST00000523961 FBXO4Q9UKT5 387 aa13.01□□□□□ -0.33
CCNC-216ENST00000523961 MUC6Q6W4X9 2439 aa13□□□□□ -0.33
CCNC-216ENST00000523961 SYNJ2BP-COX16A0A087WUM0 186 aa13□□□□□ -0.33
CCNC-216ENST00000523961 TBC1D3BA6NDS4 549 aa13□□□□□ -0.33
CCNC-216ENST00000523961 CHURC1-FNTBB4DL54 471 aa13□□□□□ -0.33
CCNC-216ENST00000523961 H0Y858 1186 aa13□□□□□ -0.33
CCNC-216ENST00000523961 K7EQS6 105 aa13□□□□□ -0.33
CCNC-216ENST00000523961 GFRA2O00451 464 aa13□□□□□ -0.33
CCNC-216ENST00000523961 TSPAN3O60637 253 aa13□□□□□ -0.33
CCNC-216ENST00000523961 MOCS2O96007 188 aaPredicted RBP13□□□□□ -0.33
CCNC-216ENST00000523961 SERPING1P05155 500 aa13□□□□□ -0.33
CCNC-216ENST00000523961 TPM1P09493 284 aa13□□□□□ -0.33
CCNC-216ENST00000523961 GZMAP12544 262 aa13□□□□□ -0.33
CCNC-216ENST00000523961 SKILP12757 684 aa13□□□□□ -0.33
CCNC-216ENST00000523961 ABCB4P21439 1286 aa13□□□□□ -0.33
CCNC-216ENST00000523961 CASP14P31944 242 aa13□□□□□ -0.33
CCNC-216ENST00000523961 FLT3P36888 993 aa13□□□□□ -0.33
CCNC-216ENST00000523961 TNFRSF4P43489 277 aa13□□□□□ -0.33
CCNC-216ENST00000523961 CXCL12P48061 93 aa13□□□□□ -0.33
CCNC-216ENST00000523961 DGKGP49619 791 aa13□□□□□ -0.33
CCNC-216ENST00000523961 SULT1E1P49888 294 aa13□□□□□ -0.33
CCNC-216ENST00000523961 NME3Q13232 169 aa13□□□□□ -0.33
CCNC-216ENST00000523961 SLC25A52Q3SY17 297 aa13□□□□□ -0.33
CCNC-216ENST00000523961 TDRD12Q587J7 1177 aaKnown RBP13□□□□□ -0.33
CCNC-216ENST00000523961 FAM133BQ5BKY9 247 aaKnown RBP13□□□□□ -0.33
CCNC-216ENST00000523961 MPP7Q5T2T1 576 aa13□□□□□ -0.33
CCNC-216ENST00000523961 SND1Q7KZF4 910 aaKnown RBP eCLIP13□□□□□ -0.33
CCNC-216ENST00000523961 VPS36Q86VN1 386 aa13□□□□□ -0.33
CCNC-216ENST00000523961 VSTM4Q8IW00 320 aa13□□□□□ -0.33
CCNC-216ENST00000523961 MCOLN2Q8IZK6 566 aa13□□□□□ -0.33
CCNC-216ENST00000523961 TERB1Q8NA31 727 aa13□□□□□ -0.33
CCNC-216ENST00000523961 C3orf20Q8ND61 904 aa13□□□□□ -0.33
CCNC-216ENST00000523961 OLIG1Q8TAK6 271 aa13□□□□□ -0.33
CCNC-216ENST00000523961 NT5C3BQ969T7 300 aa13□□□□□ -0.33
CCNC-216ENST00000523961 PGAP3Q96FM1 320 aaPredicted RBP13□□□□□ -0.33
CCNC-216ENST00000523961 VCPIP1Q96JH7 1222 aa13□□□□□ -0.33
CCNC-216ENST00000523961 ANP32EQ9BTT0 268 aa13□□□□□ -0.33
CCNC-216ENST00000523961 SELENOOQ9BVL4 669 aa13□□□□□ -0.33
CCNC-216ENST00000523961 SLC2A11Q9BYW1 496 aa13□□□□□ -0.33
CCNC-216ENST00000523961 PRMT8Q9NR22 394 aaPredicted RBP13□□□□□ -0.33
CCNC-216ENST00000523961 COX16Q9P0S2 106 aa13□□□□□ -0.33
CCNC-216ENST00000523961 PAXBP1Q9Y5B6 917 aa13□□□□□ -0.33
CCNC-216ENST00000523961 CACNA1IQ9P0X4 2223 aa12.99□□□□□ -0.33
CCNC-216ENST00000523961 GOLGA6L7A0A1B0GV03 622 aa12.99□□□□□ -0.33
CCNC-216ENST00000523961 TYW5A2RUC4 315 aaKnown RBP12.99□□□□□ -0.33
CCNC-216ENST00000523961 KCNU1A8MYU2 1149 aa12.99□□□□□ -0.33
CCNC-216ENST00000523961 CISD3P0C7P0 127 aa12.99□□□□□ -0.33
CCNC-216ENST00000523961 KRT3P12035 628 aa12.99□□□□□ -0.33
CCNC-216ENST00000523961 SLC6A4P31645 630 aa12.99□□□□□ -0.33
CCNC-216ENST00000523961 MRPS21P82921 87 aaKnown RBP12.99□□□□□ -0.33
CCNC-216ENST00000523961 DEUP1Q05D60 604 aa12.99□□□□□ -0.33
CCNC-216ENST00000523961 MESP2Q0VG99 397 aa12.99□□□□□ -0.33
CCNC-216ENST00000523961 BRMS1LQ5PSV4 323 aa12.99□□□□□ -0.33
CCNC-216ENST00000523961 PIK3R6Q5UE93 754 aa12.99□□□□□ -0.33
CCNC-216ENST00000523961 HGSNATQ68CP4 663 aa12.99□□□□□ -0.33
CCNC-216ENST00000523961 NADSYN1Q6IA69 706 aa12.99□□□□□ -0.33
CCNC-216ENST00000523961 RFWD3Q6PCD5 774 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms