RNA–Protein interactions for RNA: ENST00000523549.1

NSMCE2-211, Transcript of NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase, humanhuman

TSL 3

Gene NSMCE2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2-211ENST00000523549 MRPL10Q7Z7H8 261 aaKnown RBP4.74□□□□□ -1.65
NSMCE2-211ENST00000523549 NANOGP1Q8N7R0 232 aa4.74□□□□□ -1.65
NSMCE2-211ENST00000523549 TERB1Q8NA31 727 aa4.74□□□□□ -1.65
NSMCE2-211ENST00000523549 SPATA3Q8NHX4 192 aa4.74□□□□□ -1.65
NSMCE2-211ENST00000523549 IP6K1Q92551 441 aa4.74□□□□□ -1.65
NSMCE2-211ENST00000523549 DCPSQ96C86 337 aaKnown RBP4.74□□□□□ -1.65
NSMCE2-211ENST00000523549 PSMD1Q99460 953 aa4.74□□□□□ -1.65
NSMCE2-211ENST00000523549 SMAD5Q99717 465 aaKnown RBP4.74□□□□□ -1.65
NSMCE2-211ENST00000523549 TTYH3Q9C0H2 523 aa4.74□□□□□ -1.65
NSMCE2-211ENST00000523549 ARHGAP39Q9C0H5 1083 aa4.74□□□□□ -1.65
NSMCE2-211ENST00000523549 GLOD4Q9HC38 313 aa4.74□□□□□ -1.65
NSMCE2-211ENST00000523549 TRNAU1APQ9NX07 287 aaKnown RBP4.74□□□□□ -1.65
NSMCE2-211ENST00000523549 KLHL13Q9P2N7 655 aa4.74□□□□□ -1.65
NSMCE2-211ENST00000523549 NARFQ9UHQ1 456 aa4.74□□□□□ -1.65
NSMCE2-211ENST00000523549 CNOT7Q9UIV1 285 aaKnown RBP4.74□□□□□ -1.65
NSMCE2-211ENST00000523549 NDRG4Q9ULP0 352 aaKnown RBP4.74□□□□□ -1.65
NSMCE2-211ENST00000523549 COL15A1P39059 1388 aa4.74□□□□□ -1.65
NSMCE2-211ENST00000523549 KIF24Q5T7B8 1368 aa4.74□□□□□ -1.65
NSMCE2-211ENST00000523549 SOS1Q07889 1333 aaPredicted RBP4.73□□□□□ -1.65
NSMCE2-211ENST00000523549 RIC1Q4ADV7 1423 aa4.73□□□□□ -1.65
NSMCE2-211ENST00000523549 MGAMO43451 1857 aa4.73□□□□□ -1.65
NSMCE2-211ENST00000523549 LY6G6EA0A0G2JKS1 128 aa4.73□□□□□ -1.65
NSMCE2-211ENST00000523549 MYMKA6NI61 221 aa4.73□□□□□ -1.65
NSMCE2-211ENST00000523549 PDE8BO95263 885 aa4.73□□□□□ -1.65
NSMCE2-211ENST00000523549 FTLP02792 175 aaPredicted RBP4.73□□□□□ -1.65
NSMCE2-211ENST00000523549 POU2F2P09086 479 aa4.73□□□□□ -1.65
NSMCE2-211ENST00000523549 MAP2K6P52564 334 aa4.73□□□□□ -1.65
NSMCE2-211ENST00000523549 LILRA4P59901 499 aa4.73□□□□□ -1.65
NSMCE2-211ENST00000523549 TMEM240Q5SV17 173 aa4.73□□□□□ -1.65
NSMCE2-211ENST00000523549 TBC1D9BQ66K14 1250 aa4.73□□□□□ -1.65
NSMCE2-211ENST00000523549 ZNF813Q6ZN06 617 aa4.73□□□□□ -1.65
NSMCE2-211ENST00000523549 ABHD11Q8NFV4 315 aa4.73□□□□□ -1.65
NSMCE2-211ENST00000523549 ZNF398Q8TD17 642 aa4.73□□□□□ -1.65
NSMCE2-211ENST00000523549 SOCS4Q8WXH5 440 aa4.73□□□□□ -1.65
NSMCE2-211ENST00000523549 R3HDM4Q96D70 268 aa4.73□□□□□ -1.65
NSMCE2-211ENST00000523549 FAM167AQ96KS9 214 aa4.73□□□□□ -1.65
NSMCE2-211ENST00000523549 LMBRD1Q9NUN5 540 aa4.73□□□□□ -1.65
NSMCE2-211ENST00000523549 PNPOQ9NVS9 261 aa4.73□□□□□ -1.65
NSMCE2-211ENST00000523549 PCDHA1Q9Y5I3 950 aa4.73□□□□□ -1.65
NSMCE2-211ENST00000523549 PLXNA1Q9UIW2 1896 aa4.73□□□□□ -1.65
NSMCE2-211ENST00000523549 CDHR2Q9BYE9 1310 aa4.72□□□□□ -1.65
NSMCE2-211ENST00000523549 CNTNAP2Q9UHC6 1331 aa4.72□□□□□ -1.65
NSMCE2-211ENST00000523549 HELZ2Q9BYK8 2649 aaKnown RBP4.72□□□□□ -1.65
NSMCE2-211ENST00000523549 PI4K2BG5E9Z4 385 aa4.72□□□□□ -1.65
NSMCE2-211ENST00000523549 SNUPNO95149 360 aaKnown RBP4.72□□□□□ -1.65
NSMCE2-211ENST00000523549 HDCP19113 662 aa4.72□□□□□ -1.65
NSMCE2-211ENST00000523549 GPSM2P81274 684 aa4.72□□□□□ -1.65
NSMCE2-211ENST00000523549 EXOSC9Q06265 439 aaKnown RBP4.72□□□□□ -1.65
NSMCE2-211ENST00000523549 E2F2Q14209 437 aa4.72□□□□□ -1.65
NSMCE2-211ENST00000523549 MIDNQ504T8 468 aa4.72□□□□□ -1.65
NSMCE2-211ENST00000523549 RGS7BPQ6MZT1 257 aaPredicted RBP4.72□□□□□ -1.65
NSMCE2-211ENST00000523549 LAYNQ6UX15 382 aa4.72□□□□□ -1.65
NSMCE2-211ENST00000523549 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.72□□□□□ -1.65
NSMCE2-211ENST00000523549 FAM118BQ9BPY3 351 aa4.72□□□□□ -1.65
NSMCE2-211ENST00000523549 GGA3Q9NZ52 723 aa4.72□□□□□ -1.65
NSMCE2-211ENST00000523549 FRYQ5TBA9 3013 aa4.71□□□□□ -1.66
NSMCE2-211ENST00000523549 MAST2Q6P0Q8 1798 aa4.71□□□□□ -1.66
NSMCE2-211ENST00000523549 TONSLQ96HA7 1378 aa4.71□□□□□ -1.66
NSMCE2-211ENST00000523549 CCDC187A0A096LP49 1063 aa4.71□□□□□ -1.66
NSMCE2-211ENST00000523549 NPHP1O15259 732 aa4.71□□□□□ -1.66
NSMCE2-211ENST00000523549 ZZEF1O43149 2961 aa4.71□□□□□ -1.66
NSMCE2-211ENST00000523549 PPIP5K2O43314 1243 aa4.71□□□□□ -1.66
NSMCE2-211ENST00000523549 EXOC3O60645 756 aa4.71□□□□□ -1.66
NSMCE2-211ENST00000523549 SGPL1O95470 568 aa4.71□□□□□ -1.66
NSMCE2-211ENST00000523549 CSF1RP07333 972 aa4.71□□□□□ -1.66
NSMCE2-211ENST00000523549 NPR1P16066 1061 aa4.71□□□□□ -1.66
NSMCE2-211ENST00000523549 HOXC9P31274 260 aa4.71□□□□□ -1.66
NSMCE2-211ENST00000523549 RENBPP51606 427 aa4.71□□□□□ -1.66
NSMCE2-211ENST00000523549 FKBP1BP68106 108 aa4.71□□□□□ -1.66
NSMCE2-211ENST00000523549 NKX6-1P78426 367 aaPredicted RBP4.71□□□□□ -1.66
NSMCE2-211ENST00000523549 AMOTQ4VCS5 1084 aa4.71□□□□□ -1.66
NSMCE2-211ENST00000523549 RNASE12Q5GAN4 147 aaKnown RBP4.71□□□□□ -1.66
NSMCE2-211ENST00000523549 C10orf25Q5T742 122 aa4.71□□□□□ -1.66
NSMCE2-211ENST00000523549 CNBD1Q8NA66 436 aa4.71□□□□□ -1.66
NSMCE2-211ENST00000523549 PRSS33Q8NF86 280 aa4.71□□□□□ -1.66
NSMCE2-211ENST00000523549 NSMCE1Q8WV22 266 aa4.71□□□□□ -1.66
NSMCE2-211ENST00000523549 XAGE5Q8WWM1 108 aa4.71□□□□□ -1.66
NSMCE2-211ENST00000523549 PUS7Q96PZ0 661 aaKnown RBP4.71□□□□□ -1.66
NSMCE2-211ENST00000523549 A0A0G2JMZ2 1700 aa4.71□□□□□ -1.66
NSMCE2-211ENST00000523549 SPEGQ15772 3267 aa4.71□□□□□ -1.66
NSMCE2-211ENST00000523549 KMT2EQ8IZD2 1858 aa4.71□□□□□ -1.66
NSMCE2-211ENST00000523549 FAM205AQ6ZU69 1335 aa4.71□□□□□ -1.66
NSMCE2-211ENST00000523549 BRWD1Q9NSI6 2320 aa4.71□□□□□ -1.66
NSMCE2-211ENST00000523549 ANKRD17O75179 2603 aaKnown RBP4.7□□□□□ -1.66
NSMCE2-211ENST00000523549 IGKV2D-30A0A075B6S6 120 aa4.7□□□□□ -1.66
NSMCE2-211ENST00000523549 IGSF3O75054 1194 aa4.7□□□□□ -1.66
NSMCE2-211ENST00000523549 USP1O94782 785 aa4.7□□□□□ -1.66
NSMCE2-211ENST00000523549 TFRCP02786 760 aaKnown RBP4.7□□□□□ -1.66
NSMCE2-211ENST00000523549 A1BGP04217 495 aa4.7□□□□□ -1.66
NSMCE2-211ENST00000523549 DLDP09622 509 aaKnown RBP4.7□□□□□ -1.66
NSMCE2-211ENST00000523549 TMEM191BP0C7N4 346 aa4.7□□□□□ -1.66
NSMCE2-211ENST00000523549 PRF1P14222 555 aa4.7□□□□□ -1.66
NSMCE2-211ENST00000523549 VIPR2P41587 438 aa4.7□□□□□ -1.66
NSMCE2-211ENST00000523549 TPTEP56180 551 aa4.7□□□□□ -1.66
NSMCE2-211ENST00000523549 PLS1Q14651 629 aa4.7□□□□□ -1.66
NSMCE2-211ENST00000523549 RBMS2Q15434 407 aaKnown RBP4.7□□□□□ -1.66
NSMCE2-211ENST00000523549 CYP1B1Q16678 543 aa4.7□□□□□ -1.66
NSMCE2-211ENST00000523549 TRIM71Q2Q1W2 868 aaKnown RBP4.7□□□□□ -1.66
NSMCE2-211ENST00000523549 PGS1Q32NB8 556 aa4.7□□□□□ -1.66
NSMCE2-211ENST00000523549 LEXMQ3ZCV2 418 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms