RNA–Protein interactions for RNA: ENST00000523488.5

CSMD1-213, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 1 (best)

Gene CSMD1, Length 3,714 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-213ENST00000523488 LCTP09848 1927 aa8.63□□□□□ -1.03
CSMD1-213ENST00000523488 CENPBD1B2RD01 187 aa8.63□□□□□ -1.03
CSMD1-213ENST00000523488 E9PQ18 207 aa8.63□□□□□ -1.03
CSMD1-213ENST00000523488 GIPC1O14908 333 aa8.63□□□□□ -1.03
CSMD1-213ENST00000523488 SIN3BO75182 1162 aa8.63□□□□□ -1.03
CSMD1-213ENST00000523488 DNAJB1P25685 340 aa8.63□□□□□ -1.03
CSMD1-213ENST00000523488 GABRB2P47870 512 aa8.63□□□□□ -1.03
CSMD1-213ENST00000523488 AQP5P55064 265 aa8.63□□□□□ -1.03
CSMD1-213ENST00000523488 GK3PQ14409 553 aa8.63□□□□□ -1.03
CSMD1-213ENST00000523488 ANKDD1AQ495B1 522 aa8.63□□□□□ -1.03
CSMD1-213ENST00000523488 TCHHL1Q5QJ38 904 aaPredicted RBP8.63□□□□□ -1.03
CSMD1-213ENST00000523488 HACD2Q6Y1H2 254 aa8.63□□□□□ -1.03
CSMD1-213ENST00000523488 SEPT12Q8IYM1 358 aa8.63□□□□□ -1.03
CSMD1-213ENST00000523488 UNC5BQ8IZJ1 945 aa8.63□□□□□ -1.03
CSMD1-213ENST00000523488 FKBP10Q96AY3 582 aa8.63□□□□□ -1.03
CSMD1-213ENST00000523488 NACC2Q96BF6 587 aa8.63□□□□□ -1.03
CSMD1-213ENST00000523488 ALPK1Q96QP1 1244 aa8.63□□□□□ -1.03
CSMD1-213ENST00000523488 CYP2S1Q96SQ9 504 aa8.63□□□□□ -1.03
CSMD1-213ENST00000523488 ADAMTS10Q9H324 1103 aa8.63□□□□□ -1.03
CSMD1-213ENST00000523488 NANOGQ9H9S0 305 aa8.63□□□□□ -1.03
CSMD1-213ENST00000523488 JMJD4Q9H9V9 463 aa8.63□□□□□ -1.03
CSMD1-213ENST00000523488 PARVBQ9HBI1 364 aa8.63□□□□□ -1.03
CSMD1-213ENST00000523488 GID8Q9NWU2 228 aa8.63□□□□□ -1.03
CSMD1-213ENST00000523488 HEMK1Q9Y5R4 338 aaPredicted RBP8.63□□□□□ -1.03
CSMD1-213ENST00000523488 CCDC195A0A1B0GUA6 201 aa8.63□□□□□ -1.03
CSMD1-213ENST00000523488 KBTBD13C9JR72 458 aa8.63□□□□□ -1.03
CSMD1-213ENST00000523488 AREL1O15033 823 aa8.63□□□□□ -1.03
CSMD1-213ENST00000523488 NOL3O60936 208 aaKnown RBP8.63□□□□□ -1.03
CSMD1-213ENST00000523488 LYPLA2O95372 231 aa8.63□□□□□ -1.03
CSMD1-213ENST00000523488 S100BP04271 92 aaPredicted RBP8.63□□□□□ -1.03
CSMD1-213ENST00000523488 ALOX5P09917 674 aa8.63□□□□□ -1.03
CSMD1-213ENST00000523488 CNTFP26441 200 aa8.63□□□□□ -1.03
CSMD1-213ENST00000523488 CDKN2BP42772 138 aa8.63□□□□□ -1.03
CSMD1-213ENST00000523488 ECE1P42892 770 aa8.63□□□□□ -1.03
CSMD1-213ENST00000523488 HSD17B4P51659 736 aa8.63□□□□□ -1.03
CSMD1-213ENST00000523488 SLC5A3P53794 718 aa8.63□□□□□ -1.03
CSMD1-213ENST00000523488 YWHAGP61981 247 aaKnown RBP eCLIP8.63□□□□□ -1.03
CSMD1-213ENST00000523488 BST1Q10588 318 aa8.63□□□□□ -1.03
CSMD1-213ENST00000523488 GPS1Q13098 491 aa8.63□□□□□ -1.03
CSMD1-213ENST00000523488 DGKDQ16760 1214 aa8.63□□□□□ -1.03
CSMD1-213ENST00000523488 MGAT5BQ3V5L5 792 aa8.63□□□□□ -1.03
CSMD1-213ENST00000523488 SMUG1Q53HV7 270 aa8.63□□□□□ -1.03
CSMD1-213ENST00000523488 DCAF6Q58WW2 860 aa8.63□□□□□ -1.03
CSMD1-213ENST00000523488 FASTKD5Q7L8L6 764 aaKnown RBP8.63□□□□□ -1.03
CSMD1-213ENST00000523488 TFAP2DQ7Z6R9 452 aa8.63□□□□□ -1.03
CSMD1-213ENST00000523488 RHOT1Q8IXI2 618 aa8.63□□□□□ -1.03
CSMD1-213ENST00000523488 DAW1Q8N136 415 aa8.63□□□□□ -1.03
CSMD1-213ENST00000523488 TSPAN14Q8NG11 270 aa8.63□□□□□ -1.03
CSMD1-213ENST00000523488 FBLIM1Q8WUP2 373 aa8.63□□□□□ -1.03
CSMD1-213ENST00000523488 SLCO4A1Q96BD0 722 aa8.63□□□□□ -1.03
CSMD1-213ENST00000523488 ERLEC1Q96DZ1 483 aa8.63□□□□□ -1.03
CSMD1-213ENST00000523488 MAELQ96JY0 434 aaKnown RBP8.63□□□□□ -1.03
CSMD1-213ENST00000523488 YME1L1Q96TA2 773 aa8.63□□□□□ -1.03
CSMD1-213ENST00000523488 GNEQ9Y223 722 aaKnown RBP8.63□□□□□ -1.03
CSMD1-213ENST00000523488 MEIS2O14770 477 aa8.62□□□□□ -1.03
CSMD1-213ENST00000523488 PIAS1O75925 651 aa8.62□□□□□ -1.03
CSMD1-213ENST00000523488 TRIM49P0CI25 452 aa8.62□□□□□ -1.03
CSMD1-213ENST00000523488 TRIM49CP0CI26 452 aa8.62□□□□□ -1.03
CSMD1-213ENST00000523488 C1QBPQ07021 282 aaKnown RBP8.62□□□□□ -1.03
CSMD1-213ENST00000523488 NAB1Q13506 487 aa8.62□□□□□ -1.03
CSMD1-213ENST00000523488 SPRED1Q7Z699 444 aa8.62□□□□□ -1.03
CSMD1-213ENST00000523488 CLVS1Q8IUQ0 354 aaPredicted RBP8.62□□□□□ -1.03
CSMD1-213ENST00000523488 RNF169Q8NCN4 708 aa8.62□□□□□ -1.03
CSMD1-213ENST00000523488 TRAF3IP1Q8TDR0 691 aaPredicted RBP8.62□□□□□ -1.03
CSMD1-213ENST00000523488 ACDQ96AP0 544 aa8.62□□□□□ -1.03
CSMD1-213ENST00000523488 LRRC39Q96DD0 335 aa8.62□□□□□ -1.03
CSMD1-213ENST00000523488 IMPG2Q9BZV3 1241 aa8.62□□□□□ -1.03
CSMD1-213ENST00000523488 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.62□□□□□ -1.03
CSMD1-213ENST00000523488 NPAP1Q9NZP6 1156 aa8.62□□□□□ -1.03
CSMD1-213ENST00000523488 CD300AQ9UGN4 299 aa8.62□□□□□ -1.03
CSMD1-213ENST00000523488 ANAPC7Q9UJX3 599 aa8.62□□□□□ -1.03
CSMD1-213ENST00000523488 UGT2A1Q9Y4X1 527 aa8.62□□□□□ -1.03
CSMD1-213ENST00000523488 IQANK1A0A1B0GTG1 560 aa8.62□□□□□ -1.03
CSMD1-213ENST00000523488 K7EPI3 171 aa8.62□□□□□ -1.03
CSMD1-213ENST00000523488 EIF3FO00303 357 aaPredicted RBP8.62□□□□□ -1.03
CSMD1-213ENST00000523488 COPEO14579 308 aa8.62□□□□□ -1.03
CSMD1-213ENST00000523488 AKAP10O43572 662 aa8.62□□□□□ -1.03
CSMD1-213ENST00000523488 INHBAP08476 426 aa8.62□□□□□ -1.03
CSMD1-213ENST00000523488 PSMC3P17980 439 aa8.62□□□□□ -1.03
CSMD1-213ENST00000523488 ACO1P21399 889 aaKnown RBP8.62□□□□□ -1.03
CSMD1-213ENST00000523488 ARRB2P32121 409 aa8.62□□□□□ -1.03
CSMD1-213ENST00000523488 HSPA1LP34931 641 aa8.62□□□□□ -1.03
CSMD1-213ENST00000523488 COPAP53621 1224 aa8.62□□□□□ -1.03
CSMD1-213ENST00000523488 PSMC6P62333 389 aa8.62□□□□□ -1.03
CSMD1-213ENST00000523488 GTF2BQ00403 316 aa8.62□□□□□ -1.03
CSMD1-213ENST00000523488 ZYXQ15942 572 aaKnown RBP8.62□□□□□ -1.03
CSMD1-213ENST00000523488 FAM209AQ5JX71 171 aa8.62□□□□□ -1.03
CSMD1-213ENST00000523488 TTC39BQ5VTQ0 682 aaPredicted RBP8.62□□□□□ -1.03
CSMD1-213ENST00000523488 KAZNQ674X7 775 aa8.62□□□□□ -1.03
CSMD1-213ENST00000523488 FAM171BQ6P995 826 aa8.62□□□□□ -1.03
CSMD1-213ENST00000523488 TRIM72Q6ZMU5 477 aa8.62□□□□□ -1.03
CSMD1-213ENST00000523488 SLC7A5P1Q8MH63 180 aa8.62□□□□□ -1.03
CSMD1-213ENST00000523488 TAB3Q8N5C8 712 aaPredicted RBP8.62□□□□□ -1.03
CSMD1-213ENST00000523488 PAPD5Q8NDF8 572 aaKnown RBP8.62□□□□□ -1.03
CSMD1-213ENST00000523488 NACC1Q96RE7 527 aa8.62□□□□□ -1.03
CSMD1-213ENST00000523488 CSRNP1Q96S65 589 aa8.62□□□□□ -1.03
CSMD1-213ENST00000523488 KCNK16Q96T55 309 aa8.62□□□□□ -1.03
CSMD1-213ENST00000523488 DKK3Q9UBP4 350 aa8.62□□□□□ -1.03
CSMD1-213ENST00000523488 USTQ9Y2C2 406 aa8.62□□□□□ -1.03
CSMD1-213ENST00000523488 ADGRA2Q96PE1 1338 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 122.1 ms