RNA–Protein interactions for RNA: ENST00000523275.5

CTNNA1-237, Transcript of catenin alpha 1, humanhuman

TSL 5

Gene CTNNA1, Length 536 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-237ENST00000523275 SLC35F5Q8WV83 523 aa12.28□□□□□ -0.44
CTNNA1-237ENST00000523275 FOXJ1Q92949 421 aa12.28□□□□□ -0.44
CTNNA1-237ENST00000523275 TMA16Q96EY4 203 aaKnown RBP12.28□□□□□ -0.44
CTNNA1-237ENST00000523275 GTPBP2Q9BX10 602 aaKnown RBP12.28□□□□□ -0.44
CTNNA1-237ENST00000523275 CIPCQ9C0C6 399 aa12.28□□□□□ -0.44
CTNNA1-237ENST00000523275 MKRN2Q9H000 416 aaKnown RBP12.28□□□□□ -0.44
CTNNA1-237ENST00000523275 SLC32A1Q9H598 525 aa12.28□□□□□ -0.44
CTNNA1-237ENST00000523275 CAPN10Q9HC96 672 aa12.28□□□□□ -0.44
CTNNA1-237ENST00000523275 ITM2CQ9NQX7 267 aa12.28□□□□□ -0.44
CTNNA1-237ENST00000523275 SFMBT1Q9UHJ3 866 aa12.28□□□□□ -0.44
CTNNA1-237ENST00000523275 STOML2Q9UJZ1 356 aa12.28□□□□□ -0.44
CTNNA1-237ENST00000523275 KMT2BQ9UMN6 2715 aaPredicted RBP12.28□□□□□ -0.44
CTNNA1-237ENST00000523275 PLXND1Q9Y4D7 1925 aa12.27□□□□□ -0.44
CTNNA1-237ENST00000523275 PPP1R3GB7ZBB8 358 aa12.27□□□□□ -0.45
CTNNA1-237ENST00000523275 RNF225M0QZC1 329 aaPredicted RBP12.27□□□□□ -0.45
CTNNA1-237ENST00000523275 ARHGAP33O14559 1287 aa12.27□□□□□ -0.45
CTNNA1-237ENST00000523275 P4HA2O15460 535 aa12.27□□□□□ -0.45
CTNNA1-237ENST00000523275 GABBR2O75899 941 aa12.27□□□□□ -0.45
CTNNA1-237ENST00000523275 LATS1O95835 1130 aa12.27□□□□□ -0.45
CTNNA1-237ENST00000523275 CD6P30203 668 aa12.27□□□□□ -0.45
CTNNA1-237ENST00000523275 RGS7P49802 495 aa12.27□□□□□ -0.45
CTNNA1-237ENST00000523275 DAOAP59103 153 aa12.27□□□□□ -0.45
CTNNA1-237ENST00000523275 ZNF445P59923 1031 aa12.27□□□□□ -0.45
CTNNA1-237ENST00000523275 ARID5AQ03989 594 aa12.27□□□□□ -0.45
CTNNA1-237ENST00000523275 ZNF234Q14588 700 aa12.27□□□□□ -0.45
CTNNA1-237ENST00000523275 STILQ15468 1287 aa12.27□□□□□ -0.45
CTNNA1-237ENST00000523275 WDR45BQ5MNZ6 344 aa12.27□□□□□ -0.45
CTNNA1-237ENST00000523275 TMEM215Q68D42 235 aa12.27□□□□□ -0.45
CTNNA1-237ENST00000523275 KLHL10Q6JEL2 608 aa12.27□□□□□ -0.45
CTNNA1-237ENST00000523275 TTI2Q6NXR4 508 aa12.27□□□□□ -0.45
CTNNA1-237ENST00000523275 PMF1Q6P1K2 205 aa12.27□□□□□ -0.45
CTNNA1-237ENST00000523275 FOXR2Q6PJQ5 311 aa12.27□□□□□ -0.45
CTNNA1-237ENST00000523275 TMPRSS6Q8IU80 811 aa12.27□□□□□ -0.45
CTNNA1-237ENST00000523275 RGL4Q8IZJ4 473 aa12.27□□□□□ -0.45
CTNNA1-237ENST00000523275 HDDC3Q8N4P3 179 aa12.27□□□□□ -0.45
CTNNA1-237ENST00000523275 RBBP8NLQ8NC74 664 aaPredicted RBP12.27□□□□□ -0.45
CTNNA1-237ENST00000523275 EHBP1Q8NDI1 1231 aa12.27□□□□□ -0.45
CTNNA1-237ENST00000523275 LMO3Q8TAP4 145 aa12.27□□□□□ -0.45
CTNNA1-237ENST00000523275 NELFBQ8WX92 580 aa12.27□□□□□ -0.45
CTNNA1-237ENST00000523275 SORCS1Q8WY21 1168 aa12.27□□□□□ -0.45
CTNNA1-237ENST00000523275 IRGQQ8WZA9 623 aa12.27□□□□□ -0.45
CTNNA1-237ENST00000523275 TOE1Q96GM8 510 aaKnown RBP12.27□□□□□ -0.45
CTNNA1-237ENST00000523275 ZSWIM1Q9BR11 485 aa12.27□□□□□ -0.45
CTNNA1-237ENST00000523275 CD93Q9NPY3 652 aa12.27□□□□□ -0.45
CTNNA1-237ENST00000523275 FSCN3Q9NQT6 498 aa12.27□□□□□ -0.45
CTNNA1-237ENST00000523275 SUSD2Q9UGT4 822 aa12.27□□□□□ -0.45
CTNNA1-237ENST00000523275 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.27□□□□□ -0.45
CTNNA1-237ENST00000523275 BICDL2A1A5D9 508 aa12.26□□□□□ -0.45
CTNNA1-237ENST00000523275 UPK3BL1B0FP48 263 aa12.26□□□□□ -0.45
CTNNA1-237ENST00000523275 UPK3BL2E5RIL1 263 aa12.26□□□□□ -0.45
CTNNA1-237ENST00000523275 PIK3R2O00459 728 aa12.26□□□□□ -0.45
CTNNA1-237ENST00000523275 MSI1O43347 362 aaKnown RBP12.26□□□□□ -0.45
CTNNA1-237ENST00000523275 OPHN1O60890 802 aa12.26□□□□□ -0.45
CTNNA1-237ENST00000523275 SYPP08247 313 aa12.26□□□□□ -0.45
CTNNA1-237ENST00000523275 NCAM1P13591 858 aa12.26□□□□□ -0.45
CTNNA1-237ENST00000523275 GNSP15586 552 aa12.26□□□□□ -0.45
CTNNA1-237ENST00000523275 BMP6P22004 513 aa12.26□□□□□ -0.45
CTNNA1-237ENST00000523275 HOXD9P28356 352 aaPredicted RBP12.26□□□□□ -0.45
CTNNA1-237ENST00000523275 OXTRP30559 389 aa12.26□□□□□ -0.45
CTNNA1-237ENST00000523275 TPMTP51580 245 aa12.26□□□□□ -0.45
CTNNA1-237ENST00000523275 FOXC1Q12948 553 aa12.26□□□□□ -0.45
CTNNA1-237ENST00000523275 SEMA3BQ13214 749 aa12.26□□□□□ -0.45
CTNNA1-237ENST00000523275 MSANTD2Q6P1R3 559 aa12.26□□□□□ -0.45
CTNNA1-237ENST00000523275 SERPINA13PQ6UXR4 307 aa12.26□□□□□ -0.45
CTNNA1-237ENST00000523275 RRAGAQ7L523 313 aa12.26□□□□□ -0.45
CTNNA1-237ENST00000523275 PIP4P1Q86T03 277 aa12.26□□□□□ -0.45
CTNNA1-237ENST00000523275 CADM4Q8NFZ8 388 aa12.26□□□□□ -0.45
CTNNA1-237ENST00000523275 PRCCQ92733 491 aaPredicted RBP12.26□□□□□ -0.45
CTNNA1-237ENST00000523275 GOLGA1Q92805 767 aa12.26□□□□□ -0.45
CTNNA1-237ENST00000523275 KAT5Q92993 513 aa12.26□□□□□ -0.45
CTNNA1-237ENST00000523275 SIPA1Q96FS4 1042 aa12.26□□□□□ -0.45
CTNNA1-237ENST00000523275 HSFY1Q96LI6 401 aa12.26□□□□□ -0.45
CTNNA1-237ENST00000523275 WSB2Q9NYS7 404 aaPredicted RBP12.26□□□□□ -0.45
CTNNA1-237ENST00000523275 USP36Q9P275 1121 aaKnown RBP12.26□□□□□ -0.45
CTNNA1-237ENST00000523275 PLA2G4CQ9UP65 541 aa12.26□□□□□ -0.45
CTNNA1-237ENST00000523275 PI4KAP42356 2102 aa12.26□□□□□ -0.45
CTNNA1-237ENST00000523275 ASCC3Q8N3C0 2202 aaKnown RBP12.26□□□□□ -0.45
CTNNA1-237ENST00000523275 KCNJ18B7U540 433 aa12.25□□□□□ -0.45
CTNNA1-237ENST00000523275 M0QYV0 167 aa12.25□□□□□ -0.45
CTNNA1-237ENST00000523275 FBXO21O94952 628 aa12.25□□□□□ -0.45
CTNNA1-237ENST00000523275 GNA14O95837 355 aa12.25□□□□□ -0.45
CTNNA1-237ENST00000523275 LTFP02788 710 aa12.25□□□□□ -0.45
CTNNA1-237ENST00000523275 EPHX1P07099 455 aa12.25□□□□□ -0.45
CTNNA1-237ENST00000523275 PRKCHP24723 683 aa12.25□□□□□ -0.45
CTNNA1-237ENST00000523275 BRD2P25440 801 aaKnown RBP12.25□□□□□ -0.45
CTNNA1-237ENST00000523275 MAOBP27338 520 aa12.25□□□□□ -0.45
CTNNA1-237ENST00000523275 HLA-FP30511 346 aa12.25□□□□□ -0.45
CTNNA1-237ENST00000523275 COPAP53621 1224 aa12.25□□□□□ -0.45
CTNNA1-237ENST00000523275 GCNT1Q02742 428 aa12.25□□□□□ -0.45
CTNNA1-237ENST00000523275 KCNH2Q12809 1159 aa12.25□□□□□ -0.45
CTNNA1-237ENST00000523275 MORC3Q14149 939 aa12.25□□□□□ -0.45
CTNNA1-237ENST00000523275 PLEKHG6Q3KR16 790 aa12.25□□□□□ -0.45
CTNNA1-237ENST00000523275 TRIM59Q8IWR1 403 aa12.25□□□□□ -0.45
CTNNA1-237ENST00000523275 UNC45BQ8IWX7 931 aa12.25□□□□□ -0.45
CTNNA1-237ENST00000523275 MINDY1Q8N5J2 469 aa12.25□□□□□ -0.45
CTNNA1-237ENST00000523275 WFIKKN2Q8TEU8 576 aa12.25□□□□□ -0.45
CTNNA1-237ENST00000523275 DNASE2BQ8WZ79 361 aa12.25□□□□□ -0.45
CTNNA1-237ENST00000523275 NUP58Q9BVL2 599 aa12.25□□□□□ -0.45
CTNNA1-237ENST00000523275 GPR174Q9BXC1 333 aa12.25□□□□□ -0.45
CTNNA1-237ENST00000523275 IRX2Q9BZI1 471 aaPredicted RBP12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms