RNA–Protein interactions for RNA: ENST00000522998.1

PCM1-217, Transcript of pericentriolar material 1, humanhuman

TSL 3

Gene PCM1, Length 493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-217ENST00000522998 NTSR1P30989 418 aa3.12□□□□□ -1.91
PCM1-217ENST00000522998 SOX2P48431 317 aa3.12□□□□□ -1.91
PCM1-217ENST00000522998 TAF6P49848 677 aa3.12□□□□□ -1.91
PCM1-217ENST00000522998 RAB27AP51159 221 aa3.12□□□□□ -1.91
PCM1-217ENST00000522998 AGFG1P52594 562 aaKnown RBP3.12□□□□□ -1.91
PCM1-217ENST00000522998 POU5F1BQ06416 359 aa3.12□□□□□ -1.91
PCM1-217ENST00000522998 ISM2Q6H9L7 571 aa3.12□□□□□ -1.91
PCM1-217ENST00000522998 CLEC9AQ6UXN8 241 aa3.12□□□□□ -1.91
PCM1-217ENST00000522998 FAM83HQ6ZRV2 1179 aaPredicted RBP3.12□□□□□ -1.91
PCM1-217ENST00000522998 SPEM1Q8N4L4 309 aa3.12□□□□□ -1.91
PCM1-217ENST00000522998 C7orf57Q8NEG2 295 aa3.12□□□□□ -1.91
PCM1-217ENST00000522998 JDP2Q8WYK2 163 aa3.12□□□□□ -1.91
PCM1-217ENST00000522998 CELF1Q92879 486 aaKnown RBP3.12□□□□□ -1.91
PCM1-217ENST00000522998 HPS3Q969F9 1004 aa3.12□□□□□ -1.91
PCM1-217ENST00000522998 C1GALT1C1Q96EU7 318 aa3.12□□□□□ -1.91
PCM1-217ENST00000522998 HIST1H2AAQ96QV6 131 aa3.12□□□□□ -1.91
PCM1-217ENST00000522998 SAP30LQ9HAJ7 183 aa3.12□□□□□ -1.91
PCM1-217ENST00000522998 UTS2RQ9UKP6 389 aa3.12□□□□□ -1.91
PCM1-217ENST00000522998 PNMA8BQ9ULN7 279 aaPredicted RBP3.12□□□□□ -1.91
PCM1-217ENST00000522998 G3BP2Q9UN86 482 aaKnown RBP3.12□□□□□ -1.91
PCM1-217ENST00000522998 SLC27A6Q9Y2P4 619 aa3.12□□□□□ -1.91
PCM1-217ENST00000522998 LUC7L2Q9Y383 392 aaKnown RBP3.12□□□□□ -1.91
PCM1-217ENST00000522998 EID1Q9Y6B2 187 aa3.12□□□□□ -1.91
PCM1-217ENST00000522998 CLEC18AA5D8T8 446 aa3.11□□□□□ -1.91
PCM1-217ENST00000522998 RASSF9O75901 435 aa3.11□□□□□ -1.91
PCM1-217ENST00000522998 PPP1R3DO95685 299 aa3.11□□□□□ -1.91
PCM1-217ENST00000522998 HMGB1P09429 215 aaKnown RBP3.11□□□□□ -1.91
PCM1-217ENST00000522998 KITP10721 976 aa3.11□□□□□ -1.91
PCM1-217ENST00000522998 VCAM1P19320 739 aa3.11□□□□□ -1.91
PCM1-217ENST00000522998 CLCN5P51795 746 aa3.11□□□□□ -1.91
PCM1-217ENST00000522998 DNASE1L3Q13609 305 aa3.11□□□□□ -1.91
PCM1-217ENST00000522998 ARHGEF7Q14155 803 aa3.11□□□□□ -1.91
PCM1-217ENST00000522998 CLCA4Q14CN2 919 aa3.11□□□□□ -1.91
PCM1-217ENST00000522998 PGM5Q15124 567 aa3.11□□□□□ -1.91
PCM1-217ENST00000522998 ZNF672Q499Z4 452 aaPredicted RBP3.11□□□□□ -1.91
PCM1-217ENST00000522998 CEP85LQ5SZL2 805 aa3.11□□□□□ -1.91
PCM1-217ENST00000522998 C9orf57Q5W0N0 161 aa3.11□□□□□ -1.91
PCM1-217ENST00000522998 GRHL2Q6ISB3 625 aa3.11□□□□□ -1.91
PCM1-217ENST00000522998 LIN28BQ6ZN17 250 aaKnown RBP eCLIP3.11□□□□□ -1.91
PCM1-217ENST00000522998 C16orf82Q7Z2V1 217 aa3.11□□□□□ -1.91
PCM1-217ENST00000522998 DDIASQ8IXT1 998 aa3.11□□□□□ -1.91
PCM1-217ENST00000522998 RAVER1Q8IY67 606 aaKnown RBP3.11□□□□□ -1.91
PCM1-217ENST00000522998 DDX51Q8N8A6 666 aaKnown RBP eCLIP3.11□□□□□ -1.91
PCM1-217ENST00000522998 ARL14EPQ8N8R7 260 aaPredicted RBP3.11□□□□□ -1.91
PCM1-217ENST00000522998 CLEC18CQ8NCF0 446 aa3.11□□□□□ -1.91
PCM1-217ENST00000522998 RNF26Q9BY78 433 aaPredicted RBP3.11□□□□□ -1.91
PCM1-217ENST00000522998 SPRY4Q9C004 299 aa3.11□□□□□ -1.91
PCM1-217ENST00000522998 ISCUQ9H1K1 167 aa3.11□□□□□ -1.91
PCM1-217ENST00000522998 AASDHPPTQ9NRN7 309 aa3.11□□□□□ -1.91
PCM1-217ENST00000522998 ABHD10Q9NUJ1 306 aa3.11□□□□□ -1.91
PCM1-217ENST00000522998 MAGED2Q9UNF1 606 aaPredicted RBP3.11□□□□□ -1.91
PCM1-217ENST00000522998 ANKRD6Q9Y2G4 727 aa3.11□□□□□ -1.91
PCM1-217ENST00000522998 DPPA5A6NC42 116 aa3.1□□□□□ -1.91
PCM1-217ENST00000522998 MBD3L4A6NDZ8 208 aaPredicted RBP3.1□□□□□ -1.91
PCM1-217ENST00000522998 MBD3L3A6NE82 208 aaPredicted RBP3.1□□□□□ -1.91
PCM1-217ENST00000522998 TTC34A8MYJ7 566 aa3.1□□□□□ -1.91
PCM1-217ENST00000522998 FAM227AF5H4B4 570 aa3.1□□□□□ -1.91
PCM1-217ENST00000522998 MDM4O15151 490 aa3.1□□□□□ -1.91
PCM1-217ENST00000522998 SCGB1D2O95969 90 aa3.1□□□□□ -1.91
PCM1-217ENST00000522998 SLC3A2P08195 630 aaKnown RBP3.1□□□□□ -1.91
PCM1-217ENST00000522998 EN2P19622 333 aaPredicted RBP3.1□□□□□ -1.91
PCM1-217ENST00000522998 RBL1P28749 1068 aa3.1□□□□□ -1.91
PCM1-217ENST00000522998 HOXD12P35452 270 aa3.1□□□□□ -1.91
PCM1-217ENST00000522998 PDLIM4P50479 330 aa3.1□□□□□ -1.91
PCM1-217ENST00000522998 KRTAP10-3P60369 221 aa3.1□□□□□ -1.91
PCM1-217ENST00000522998 POU3F1Q03052 451 aaPredicted RBP3.1□□□□□ -1.91
PCM1-217ENST00000522998 Q0VFX4 171 aa3.1□□□□□ -1.91
PCM1-217ENST00000522998 ASPHD1Q5U4P2 390 aa3.1□□□□□ -1.91
PCM1-217ENST00000522998 NXNQ6DKJ4 435 aa3.1□□□□□ -1.91
PCM1-217ENST00000522998 PARM1Q6UWI2 310 aa3.1□□□□□ -1.91
PCM1-217ENST00000522998 Q6ZTK2 550 aa3.1□□□□□ -1.91
PCM1-217ENST00000522998 ARMC9Q7Z3E5 817 aa3.1□□□□□ -1.91
PCM1-217ENST00000522998 CTU1Q7Z7A3 348 aaKnown RBP3.1□□□□□ -1.91
PCM1-217ENST00000522998 DAAM2Q86T65 1068 aa3.1□□□□□ -1.91
PCM1-217ENST00000522998 SMCR8Q8TEV9 937 aaPredicted RBP3.1□□□□□ -1.91
PCM1-217ENST00000522998 MAML1Q92585 1016 aa3.1□□□□□ -1.91
PCM1-217ENST00000522998 TAF15Q92804 592 aaKnown RBP eCLIP3.1□□□□□ -1.91
PCM1-217ENST00000522998 AIFM3Q96NN9 605 aa3.1□□□□□ -1.91
PCM1-217ENST00000522998 NT5C1BQ96P26 610 aa3.1□□□□□ -1.91
PCM1-217ENST00000522998 ZCWPW1Q9H0M4 648 aa3.1□□□□□ -1.91
PCM1-217ENST00000522998 DHX36Q9H2U1 1008 aaKnown RBP3.1□□□□□ -1.91
PCM1-217ENST00000522998 RETREG1Q9H6L5 497 aa3.1□□□□□ -1.91
PCM1-217ENST00000522998 ZIM2Q9NZV7 527 aa3.1□□□□□ -1.91
PCM1-217ENST00000522998 PLEKHB1Q9UF11 243 aaPredicted RBP3.1□□□□□ -1.91
PCM1-217ENST00000522998 VPS4AQ9UN37 437 aa3.1□□□□□ -1.91
PCM1-217ENST00000522998 PTGDR2Q9Y5Y4 395 aa3.1□□□□□ -1.91
PCM1-217ENST00000522998 DOCK7Q96N67 2140 aa3.1□□□□□ -1.91
PCM1-217ENST00000522998 A0A1B0GVT2 93 aa3.09□□□□□ -1.91
PCM1-217ENST00000522998 PRR23AA6NEV1 266 aa3.09□□□□□ -1.91
PCM1-217ENST00000522998 AQP7P3A6NL99 342 aa3.09□□□□□ -1.91
PCM1-217ENST00000522998 INAFM1C9JVW0 142 aa3.09□□□□□ -1.91
PCM1-217ENST00000522998 PYCARD-AS1I3L0S3 204 aa3.09□□□□□ -1.91
PCM1-217ENST00000522998 PRYO14603 147 aa3.09□□□□□ -1.91
PCM1-217ENST00000522998 TSPAN6O43657 245 aa3.09□□□□□ -1.91
PCM1-217ENST00000522998 PRSS2P07478 247 aa3.09□□□□□ -1.91
PCM1-217ENST00000522998 PF4V1P10720 104 aa3.09□□□□□ -1.91
PCM1-217ENST00000522998 HTR1BP28222 390 aa3.09□□□□□ -1.91
PCM1-217ENST00000522998 CIITAP33076 1130 aa3.09□□□□□ -1.91
PCM1-217ENST00000522998 COPAP53621 1224 aa3.09□□□□□ -1.91
PCM1-217ENST00000522998 DLX5P56178 289 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms