RNA–Protein interactions for RNA: ENST00000522720.1

PABPC1-221, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 4

Gene PABPC1, Length 593 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-221ENST00000522720 SLC26A9Q7LBE3 791 aa17.05■□□□□ 0.32
PABPC1-221ENST00000522720 WDR5BQ86VZ2 330 aa17.05■□□□□ 0.32
PABPC1-221ENST00000522720 ZDHHC17Q8IUH5 632 aa17.05■□□□□ 0.32
PABPC1-221ENST00000522720 ALLCQ8N6M5 410 aa17.05■□□□□ 0.32
PABPC1-221ENST00000522720 ADAM32Q8TC27 787 aa17.05■□□□□ 0.32
PABPC1-221ENST00000522720 DDI1Q8WTU0 396 aa17.05■□□□□ 0.32
PABPC1-221ENST00000522720 TMA16Q96EY4 203 aaKnown RBP17.05■□□□□ 0.32
PABPC1-221ENST00000522720 SLC2A11Q9BYW1 496 aa17.05■□□□□ 0.32
PABPC1-221ENST00000522720 IRX2Q9BZI1 471 aaPredicted RBP17.05■□□□□ 0.32
PABPC1-221ENST00000522720 NOCTQ9UK39 431 aaKnown RBP17.05■□□□□ 0.32
PABPC1-221ENST00000522720 SLC27A6Q9Y2P4 619 aa17.05■□□□□ 0.32
PABPC1-221ENST00000522720 SDK1Q7Z5N4 2213 aa17.04■□□□□ 0.32
PABPC1-221ENST00000522720 ZNF292O60281 2723 aa17.04■□□□□ 0.32
PABPC1-221ENST00000522720 HRO43593 1189 aa17.04■□□□□ 0.32
PABPC1-221ENST00000522720 ACSL4O60488 711 aa17.04■□□□□ 0.32
PABPC1-221ENST00000522720 KLF8O95600 359 aaPredicted RBP17.04■□□□□ 0.32
PABPC1-221ENST00000522720 APBB3O95704 486 aa17.04■□□□□ 0.32
PABPC1-221ENST00000522720 TRUB2O95900 331 aaKnown RBP17.04■□□□□ 0.32
PABPC1-221ENST00000522720 PXNP49023 591 aaPredicted RBP17.04■□□□□ 0.32
PABPC1-221ENST00000522720 CDK17Q00537 523 aa17.04■□□□□ 0.32
PABPC1-221ENST00000522720 EIF4EBP2Q13542 120 aaPredicted RBP17.04■□□□□ 0.32
PABPC1-221ENST00000522720 CRY1Q16526 586 aa17.04■□□□□ 0.32
PABPC1-221ENST00000522720 FILIP1LQ4L180 1135 aa17.04■□□□□ 0.32
PABPC1-221ENST00000522720 DCAF6Q58WW2 860 aa17.04■□□□□ 0.32
PABPC1-221ENST00000522720 ERICH1Q86X53 443 aa17.04■□□□□ 0.32
PABPC1-221ENST00000522720 DEFB106AQ8N104 65 aa17.04■□□□□ 0.32
PABPC1-221ENST00000522720 ZNF397Q8NF99 534 aaPredicted RBP17.04■□□□□ 0.32
PABPC1-221ENST00000522720 SLC20A1Q8WUM9 679 aa17.04■□□□□ 0.32
PABPC1-221ENST00000522720 C18orf8Q96DM3 657 aa17.04■□□□□ 0.32
PABPC1-221ENST00000522720 HHIPQ96QV1 700 aa17.04■□□□□ 0.32
PABPC1-221ENST00000522720 CBX8Q9HC52 389 aa17.04■□□□□ 0.32
PABPC1-221ENST00000522720 HCN2Q9UL51 889 aa17.04■□□□□ 0.32
PABPC1-221ENST00000522720 SPAG17Q6Q759 2223 aa17.03■□□□□ 0.32
PABPC1-221ENST00000522720 PRRT4C9JH25 899 aa17.03■□□□□ 0.32
PABPC1-221ENST00000522720 SGK1O00141 431 aa17.03■□□□□ 0.32
PABPC1-221ENST00000522720 IRAK2O43187 625 aa17.03■□□□□ 0.32
PABPC1-221ENST00000522720 TSPAN3O60637 253 aa17.03■□□□□ 0.32
PABPC1-221ENST00000522720 ADAM23O75077 832 aa17.03■□□□□ 0.32
PABPC1-221ENST00000522720 GRAP2O75791 330 aa17.03■□□□□ 0.32
PABPC1-221ENST00000522720 CAVIN2O95810 425 aa17.03■□□□□ 0.32
PABPC1-221ENST00000522720 CHRNB2P17787 502 aa17.03■□□□□ 0.32
PABPC1-221ENST00000522720 HOXD9P28356 352 aaPredicted RBP17.03■□□□□ 0.32
PABPC1-221ENST00000522720 DGKEP52429 567 aa17.03■□□□□ 0.32
PABPC1-221ENST00000522720 NOMO3P69849 1222 aa17.03■□□□□ 0.32
PABPC1-221ENST00000522720 PITX1P78337 314 aaPredicted RBP17.03■□□□□ 0.32
PABPC1-221ENST00000522720 CDR2Q01850 454 aa17.03■□□□□ 0.32
PABPC1-221ENST00000522720 FAM133BQ5BKY9 247 aaKnown RBP17.03■□□□□ 0.32
PABPC1-221ENST00000522720 EOGTQ5NDL2 527 aa17.03■□□□□ 0.32
PABPC1-221ENST00000522720 PIK3R6Q5UE93 754 aa17.03■□□□□ 0.32
PABPC1-221ENST00000522720 TRMT11Q7Z4G4 463 aaKnown RBP17.03■□□□□ 0.32
PABPC1-221ENST00000522720 ZNF513Q8N8E2 541 aaPredicted RBP17.03■□□□□ 0.32
PABPC1-221ENST00000522720 TXNDC5Q8NBS9 432 aaKnown RBP17.03■□□□□ 0.32
PABPC1-221ENST00000522720 ZDHHC4Q9NPG8 344 aa17.03■□□□□ 0.32
PABPC1-221ENST00000522720 EBF1Q9UH73 591 aa17.03■□□□□ 0.32
PABPC1-221ENST00000522720 CLEC4EQ9ULY5 219 aa17.03■□□□□ 0.32
PABPC1-221ENST00000522720 EML5Q05BV3 1969 aa17.02■□□□□ 0.32
PABPC1-221ENST00000522720 GOLGA6L7A0A1B0GV03 622 aa17.02■□□□□ 0.32
PABPC1-221ENST00000522720 AXIN1O15169 862 aa17.02■□□□□ 0.32
PABPC1-221ENST00000522720 CYP1A1P04798 512 aaPredicted RBP17.02■□□□□ 0.32
PABPC1-221ENST00000522720 NOS2P35228 1153 aa17.02■□□□□ 0.32
PABPC1-221ENST00000522720 SCNN1AP37088 669 aa17.02■□□□□ 0.32
PABPC1-221ENST00000522720 FMO1Q01740 532 aa17.02■□□□□ 0.32
PABPC1-221ENST00000522720 GEN1Q17RS7 908 aa17.02■□□□□ 0.32
PABPC1-221ENST00000522720 ZSCAN23Q3MJ62 389 aa17.02■□□□□ 0.32
PABPC1-221ENST00000522720 ZC3H12AQ5D1E8 599 aaKnown RBP17.02■□□□□ 0.32
PABPC1-221ENST00000522720 MPP7Q5T2T1 576 aa17.02■□□□□ 0.32
PABPC1-221ENST00000522720 NAA35Q5VZE5 725 aa17.02■□□□□ 0.32
PABPC1-221ENST00000522720 NADSYN1Q6IA69 706 aa17.02■□□□□ 0.32
PABPC1-221ENST00000522720 RFWD3Q6PCD5 774 aa17.02■□□□□ 0.32
PABPC1-221ENST00000522720 TMEM92Q6UXU6 159 aa17.02■□□□□ 0.32
PABPC1-221ENST00000522720 TSTD1Q8NFU3 115 aa17.02■□□□□ 0.32
PABPC1-221ENST00000522720 CPA5Q8WXQ8 436 aa17.02■□□□□ 0.32
PABPC1-221ENST00000522720 DDX50Q9BQ39 737 aaKnown RBP17.02■□□□□ 0.32
PABPC1-221ENST00000522720 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.02■□□□□ 0.32
PABPC1-221ENST00000522720 DDIT4Q9NX09 232 aa17.02■□□□□ 0.32
PABPC1-221ENST00000522720 FRYLO94915 3013 aa17.01■□□□□ 0.31
PABPC1-221ENST00000522720 A0A1B0GTH6 734 aa17.01■□□□□ 0.31
PABPC1-221ENST00000522720 A0A1W2PQC6 194 aa17.01■□□□□ 0.31
PABPC1-221ENST00000522720 DAB1O75553 588 aa17.01■□□□□ 0.31
PABPC1-221ENST00000522720 APOEP02649 317 aa17.01■□□□□ 0.31
PABPC1-221ENST00000522720 HNRNPLP14866 589 aaKnown RBP eCLIP17.01■□□□□ 0.31
PABPC1-221ENST00000522720 NTSR1P30989 418 aa17.01■□□□□ 0.31
PABPC1-221ENST00000522720 SLC6A4P31645 630 aa17.01■□□□□ 0.31
PABPC1-221ENST00000522720 GBP1P32455 592 aa17.01■□□□□ 0.31
PABPC1-221ENST00000522720 MATKP42679 507 aa17.01■□□□□ 0.31
PABPC1-221ENST00000522720 SRSF5Q13243 272 aaKnown RBP17.01■□□□□ 0.31
PABPC1-221ENST00000522720 SIM2Q14190 667 aaPredicted RBP17.01■□□□□ 0.31
PABPC1-221ENST00000522720 EGFLAMQ63HQ2 1017 aa17.01■□□□□ 0.31
PABPC1-221ENST00000522720 RNF43Q68DV7 783 aa17.01■□□□□ 0.31
PABPC1-221ENST00000522720 TRIM72Q6ZMU5 477 aa17.01■□□□□ 0.31
PABPC1-221ENST00000522720 CACNA2D4Q7Z3S7 1137 aa17.01■□□□□ 0.31
PABPC1-221ENST00000522720 LUZP1Q86V48 1076 aa17.01■□□□□ 0.31
PABPC1-221ENST00000522720 XYLT1Q86Y38 959 aa17.01■□□□□ 0.31
PABPC1-221ENST00000522720 MSANTD4Q8NCY6 345 aa17.01■□□□□ 0.31
PABPC1-221ENST00000522720 GAB3Q8WWW8 586 aa17.01■□□□□ 0.31
PABPC1-221ENST00000522720 BTN2A3PQ96KV6 586 aa17.01■□□□□ 0.31
PABPC1-221ENST00000522720 NAP1L5Q96NT1 182 aaPredicted RBP17.01■□□□□ 0.31
PABPC1-221ENST00000522720 FAM204AQ9H8W3 233 aa17.01■□□□□ 0.31
PABPC1-221ENST00000522720 RRN3Q9NYV6 651 aa17.01■□□□□ 0.31
PABPC1-221ENST00000522720 SMG5Q9UPR3 1016 aaKnown RBP17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms