RNA–Protein interactions for RNA: ENST00000521944.1

TRAPPC9-212, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-212ENST00000521944 F8VP50 259 aa9.4□□□□□ -0.9
TRAPPC9-212ENST00000521944 DFNA5O60443 496 aa9.4□□□□□ -0.9
TRAPPC9-212ENST00000521944 ITGAVP06756 1048 aa9.4□□□□□ -0.9
TRAPPC9-212ENST00000521944 OR52Z1P0C646 297 aa9.4□□□□□ -0.9
TRAPPC9-212ENST00000521944 CKMT2P17540 419 aa9.4□□□□□ -0.9
TRAPPC9-212ENST00000521944 XBP1P17861 261 aa9.4□□□□□ -0.9
TRAPPC9-212ENST00000521944 ACP1P24666 158 aa9.4□□□□□ -0.9
TRAPPC9-212ENST00000521944 NCKAP1LP55160 1127 aa9.4□□□□□ -0.9
TRAPPC9-212ENST00000521944 GABREP78334 506 aa9.4□□□□□ -0.9
TRAPPC9-212ENST00000521944 ZNF174Q15697 407 aa9.4□□□□□ -0.9
TRAPPC9-212ENST00000521944 GEN1Q17RS7 908 aa9.4□□□□□ -0.9
TRAPPC9-212ENST00000521944 OXLD1Q5BKU9 147 aa9.4□□□□□ -0.9
TRAPPC9-212ENST00000521944 TPGS1Q6ZTW0 290 aa9.4□□□□□ -0.9
TRAPPC9-212ENST00000521944 HTR3DQ70Z44 454 aa9.4□□□□□ -0.9
TRAPPC9-212ENST00000521944 TMEM86AQ8N2M4 240 aa9.4□□□□□ -0.9
TRAPPC9-212ENST00000521944 C1orf127Q8N9H9 656 aa9.4□□□□□ -0.9
TRAPPC9-212ENST00000521944 KBTBD7Q8WVZ9 684 aa9.4□□□□□ -0.9
TRAPPC9-212ENST00000521944 CEP295NLQ96MC4 621 aa9.4□□□□□ -0.9
TRAPPC9-212ENST00000521944 MMTAG2Q9BU76 263 aaKnown RBP9.4□□□□□ -0.9
TRAPPC9-212ENST00000521944 MSTO1Q9BUK6 570 aa9.4□□□□□ -0.9
TRAPPC9-212ENST00000521944 BBS2Q9BXC9 721 aa9.4□□□□□ -0.9
TRAPPC9-212ENST00000521944 CCSER2Q9H7U1 834 aa9.4□□□□□ -0.9
TRAPPC9-212ENST00000521944 GDAP2Q9NXN4 497 aa9.4□□□□□ -0.9
TRAPPC9-212ENST00000521944 ORC3Q9UBD5 711 aaPredicted RBP9.4□□□□□ -0.9
TRAPPC9-212ENST00000521944 MAGEC2Q9UBF1 373 aaPredicted RBP9.4□□□□□ -0.9
TRAPPC9-212ENST00000521944 CHORDC1Q9UHD1 332 aaPredicted RBP9.4□□□□□ -0.9
TRAPPC9-212ENST00000521944 ADAMTS1Q9UHI8 967 aa9.4□□□□□ -0.9
TRAPPC9-212ENST00000521944 MYH10P35580 1976 aa9.4□□□□□ -0.9
TRAPPC9-212ENST00000521944 MYH11P35749 1972 aa9.39□□□□□ -0.91
TRAPPC9-212ENST00000521944 PLXNA2O75051 1894 aa9.39□□□□□ -0.91
TRAPPC9-212ENST00000521944 PMS2P1A4D2B8 440 aa9.39□□□□□ -0.91
TRAPPC9-212ENST00000521944 POM121CA8CG34 1229 aa9.39□□□□□ -0.91
TRAPPC9-212ENST00000521944 LAD1O00515 517 aa9.39□□□□□ -0.91
TRAPPC9-212ENST00000521944 TRIM38O00635 465 aa9.39□□□□□ -0.91
TRAPPC9-212ENST00000521944 HNRNPDLO14979 420 aaKnown RBP9.39□□□□□ -0.91
TRAPPC9-212ENST00000521944 EPHA8P29322 1005 aaPredicted RBP9.39□□□□□ -0.91
TRAPPC9-212ENST00000521944 POLR2BP30876 1174 aaKnown RBP9.39□□□□□ -0.91
TRAPPC9-212ENST00000521944 GPC1P35052 558 aa9.39□□□□□ -0.91
TRAPPC9-212ENST00000521944 DGKGP49619 791 aa9.39□□□□□ -0.91
TRAPPC9-212ENST00000521944 LIG4P49917 911 aa9.39□□□□□ -0.91
TRAPPC9-212ENST00000521944 MYL7Q01449 175 aa9.39□□□□□ -0.91
TRAPPC9-212ENST00000521944 ST3GAL1Q11201 340 aa9.39□□□□□ -0.91
TRAPPC9-212ENST00000521944 STARD3Q14849 445 aa9.39□□□□□ -0.91
TRAPPC9-212ENST00000521944 IL17AQ16552 155 aa9.39□□□□□ -0.91
TRAPPC9-212ENST00000521944 SNX30Q5VWJ9 437 aa9.39□□□□□ -0.91
TRAPPC9-212ENST00000521944 HAUS3Q68CZ6 603 aa9.39□□□□□ -0.91
TRAPPC9-212ENST00000521944 TMEM215Q68D42 235 aa9.39□□□□□ -0.91
TRAPPC9-212ENST00000521944 CPLX2Q6PUV4 134 aaKnown RBP9.39□□□□□ -0.91
TRAPPC9-212ENST00000521944 DIS3L2Q8IYB7 885 aaKnown RBP9.39□□□□□ -0.91
TRAPPC9-212ENST00000521944 ZSWIM2Q8NEG5 633 aa9.39□□□□□ -0.91
TRAPPC9-212ENST00000521944 SORCS1Q8WY21 1168 aa9.39□□□□□ -0.91
TRAPPC9-212ENST00000521944 BHMTQ93088 406 aa9.39□□□□□ -0.91
TRAPPC9-212ENST00000521944 BICD1Q96G01 975 aa9.39□□□□□ -0.91
TRAPPC9-212ENST00000521944 PRR11Q96HE9 360 aaPredicted RBP9.39□□□□□ -0.91
TRAPPC9-212ENST00000521944 PCED1BQ96HM7 432 aa9.39□□□□□ -0.91
TRAPPC9-212ENST00000521944 C8orf48Q96LL4 319 aa9.39□□□□□ -0.91
TRAPPC9-212ENST00000521944 SLC6A18Q96N87 628 aa9.39□□□□□ -0.91
TRAPPC9-212ENST00000521944 POLR1BQ9H9Y6 1135 aa9.39□□□□□ -0.91
TRAPPC9-212ENST00000521944 PLK2Q9NYY3 685 aa9.39□□□□□ -0.91
TRAPPC9-212ENST00000521944 SIX4Q9UIU6 781 aa9.39□□□□□ -0.91
TRAPPC9-212ENST00000521944 CLEC4EQ9ULY5 219 aa9.39□□□□□ -0.91
TRAPPC9-212ENST00000521944 AGAP1Q9UPQ3 857 aa9.39□□□□□ -0.91
TRAPPC9-212ENST00000521944 DNM3Q9UQ16 869 aa9.39□□□□□ -0.91
TRAPPC9-212ENST00000521944 SH3BP1Q9Y3L3 701 aa9.39□□□□□ -0.91
TRAPPC9-212ENST00000521944 GTF3C3Q9Y5Q9 886 aa9.39□□□□□ -0.91
TRAPPC9-212ENST00000521944 OTOGQ6ZRI0 2925 aa9.39□□□□□ -0.91
TRAPPC9-212ENST00000521944 MTORP42345 2549 aa9.39□□□□□ -0.91
TRAPPC9-212ENST00000521944 A0A1W2PR77 199 aa9.38□□□□□ -0.91
TRAPPC9-212ENST00000521944 HUS1O60921 280 aa9.38□□□□□ -0.91
TRAPPC9-212ENST00000521944 USP12O75317 370 aa9.38□□□□□ -0.91
TRAPPC9-212ENST00000521944 FSBPO95073 299 aa9.38□□□□□ -0.91
TRAPPC9-212ENST00000521944 SEMA4FO95754 770 aa9.38□□□□□ -0.91
TRAPPC9-212ENST00000521944 TBX18O95935 607 aa9.38□□□□□ -0.91
TRAPPC9-212ENST00000521944 ZDHHC11BP0C7U3 371 aa9.38□□□□□ -0.91
TRAPPC9-212ENST00000521944 FAM87AP0C7U9 286 aa9.38□□□□□ -0.91
TRAPPC9-212ENST00000521944 IRF1P10914 325 aa9.38□□□□□ -0.91
TRAPPC9-212ENST00000521944 PLCG1P19174 1290 aa9.38□□□□□ -0.91
TRAPPC9-212ENST00000521944 ABCB4P21439 1286 aa9.38□□□□□ -0.91
TRAPPC9-212ENST00000521944 PSMA5P28066 241 aa9.38□□□□□ -0.91
TRAPPC9-212ENST00000521944 CTSOP43234 321 aaPredicted RBP9.38□□□□□ -0.91
TRAPPC9-212ENST00000521944 LHX1P48742 406 aa9.38□□□□□ -0.91
TRAPPC9-212ENST00000521944 ZNF132P52740 706 aa9.38□□□□□ -0.91
TRAPPC9-212ENST00000521944 SMTNP53814 917 aa9.38□□□□□ -0.91
TRAPPC9-212ENST00000521944 MFAP3P55082 362 aa9.38□□□□□ -0.91
TRAPPC9-212ENST00000521944 RACK1P63244 317 aaKnown RBP9.38□□□□□ -0.91
TRAPPC9-212ENST00000521944 CLN3Q13286 438 aa9.38□□□□□ -0.91
TRAPPC9-212ENST00000521944 ZNF234Q14588 700 aa9.38□□□□□ -0.91
TRAPPC9-212ENST00000521944 IGFBP7Q16270 282 aa9.38□□□□□ -0.91
TRAPPC9-212ENST00000521944 ARSHQ5FYA8 562 aa9.38□□□□□ -0.91
TRAPPC9-212ENST00000521944 C4orf50Q6ZRC1 276 aa9.38□□□□□ -0.91
TRAPPC9-212ENST00000521944 LSMEM2Q8N112 164 aa9.38□□□□□ -0.91
TRAPPC9-212ENST00000521944 IGSF22Q8N9C0 903 aa9.38□□□□□ -0.91
TRAPPC9-212ENST00000521944 SCAMP5Q8TAC9 235 aa9.38□□□□□ -0.91
TRAPPC9-212ENST00000521944 EXTL1Q92935 676 aa9.38□□□□□ -0.91
TRAPPC9-212ENST00000521944 XPO6Q96QU8 1125 aaKnown RBP9.38□□□□□ -0.91
TRAPPC9-212ENST00000521944 FIZ1Q96SL8 496 aa9.38□□□□□ -0.91
TRAPPC9-212ENST00000521944 SYT15Q9BQS2 421 aa9.38□□□□□ -0.91
TRAPPC9-212ENST00000521944 CAAP1Q9H8G2 361 aa9.38□□□□□ -0.91
TRAPPC9-212ENST00000521944 WDR35Q9P2L0 1181 aa9.38□□□□□ -0.91
TRAPPC9-212ENST00000521944 SLC27A6Q9Y2P4 619 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms