RNA–Protein interactions for RNA: ENST00000521253.1

TRIM35-203, Transcript of tripartite motif containing 35, humanhuman

TSL 1 (best) BASIC

Gene TRIM35, Length 1,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-203ENST00000521253 ALLCQ8N6M5 410 aa21.48■■□□□ 1.03
TRIM35-203ENST00000521253 IL17RCQ8NAC3 791 aa21.48■■□□□ 1.03
TRIM35-203ENST00000521253 NAP1L5Q96NT1 182 aaPredicted RBP21.48■■□□□ 1.03
TRIM35-203ENST00000521253 CLEC4EQ9ULY5 219 aa21.48■■□□□ 1.03
TRIM35-203ENST00000521253 MMP17Q9ULZ9 603 aa21.48■■□□□ 1.03
TRIM35-203ENST00000521253 GPR179Q6PRD1 2367 aa21.48■■□□□ 1.03
TRIM35-203ENST00000521253 KIAA1549LQ6ZVL6 1849 aa21.48■■□□□ 1.03
TRIM35-203ENST00000521253 A0A1B0GTH6 734 aa21.47■■□□□ 1.03
TRIM35-203ENST00000521253 GOLGA6L7A0A1B0GV03 622 aa21.47■■□□□ 1.03
TRIM35-203ENST00000521253 PRRT4C9JH25 899 aa21.47■■□□□ 1.03
TRIM35-203ENST00000521253 ACSL4O60488 711 aa21.47■■□□□ 1.03
TRIM35-203ENST00000521253 KLF8O95600 359 aaPredicted RBP21.47■■□□□ 1.03
TRIM35-203ENST00000521253 LMNAP02545 664 aaKnown RBP21.47■■□□□ 1.03
TRIM35-203ENST00000521253 GABRB2P47870 512 aa21.47■■□□□ 1.03
TRIM35-203ENST00000521253 ZNF445P59923 1031 aa21.47■■□□□ 1.03
TRIM35-203ENST00000521253 FMO1Q01740 532 aa21.47■■□□□ 1.03
TRIM35-203ENST00000521253 MPPE1Q53F39 396 aa21.47■■□□□ 1.03
TRIM35-203ENST00000521253 FAM133BQ5BKY9 247 aaKnown RBP21.47■■□□□ 1.03
TRIM35-203ENST00000521253 NAA35Q5VZE5 725 aa21.47■■□□□ 1.03
TRIM35-203ENST00000521253 CACNA2D4Q7Z3S7 1137 aa21.47■■□□□ 1.03
TRIM35-203ENST00000521253 ZDHHC17Q8IUH5 632 aa21.47■■□□□ 1.03
TRIM35-203ENST00000521253 CAMKK1Q8N5S9 505 aa21.47■■□□□ 1.03
TRIM35-203ENST00000521253 TXNDC5Q8NBS9 432 aaKnown RBP21.47■■□□□ 1.03
TRIM35-203ENST00000521253 CPA5Q8WXQ8 436 aa21.47■■□□□ 1.03
TRIM35-203ENST00000521253 AZIN2Q96A70 460 aa21.47■■□□□ 1.03
TRIM35-203ENST00000521253 C18orf8Q96DM3 657 aa21.47■■□□□ 1.03
TRIM35-203ENST00000521253 HCN2Q9UL51 889 aa21.47■■□□□ 1.03
TRIM35-203ENST00000521253 FANCMQ8IYD8 2048 aa21.46■■□□□ 1.03
TRIM35-203ENST00000521253 SGK1O00141 431 aa21.46■■□□□ 1.03
TRIM35-203ENST00000521253 DAB1O75553 588 aa21.46■■□□□ 1.03
TRIM35-203ENST00000521253 CAVIN2O95810 425 aa21.46■■□□□ 1.03
TRIM35-203ENST00000521253 HOXD9P28356 352 aaPredicted RBP21.46■■□□□ 1.03
TRIM35-203ENST00000521253 SLC6A4P31645 630 aa21.46■■□□□ 1.03
TRIM35-203ENST00000521253 SGSHP51688 502 aa21.46■■□□□ 1.03
TRIM35-203ENST00000521253 CDK17Q00537 523 aa21.46■■□□□ 1.03
TRIM35-203ENST00000521253 ARID5AQ03989 594 aa21.46■■□□□ 1.03
TRIM35-203ENST00000521253 EIF4EBP2Q13542 120 aaPredicted RBP21.46■■□□□ 1.03
TRIM35-203ENST00000521253 HSF5Q4G112 596 aaPredicted RBP21.46■■□□□ 1.03
TRIM35-203ENST00000521253 C2CD6Q53TS8 623 aa21.46■■□□□ 1.03
TRIM35-203ENST00000521253 ZC3H12AQ5D1E8 599 aaKnown RBP21.46■■□□□ 1.03
TRIM35-203ENST00000521253 NADSYN1Q6IA69 706 aa21.46■■□□□ 1.03
TRIM35-203ENST00000521253 RFWD3Q6PCD5 774 aa21.46■■□□□ 1.03
TRIM35-203ENST00000521253 WDR5BQ86VZ2 330 aa21.46■■□□□ 1.03
TRIM35-203ENST00000521253 XYLT1Q86Y38 959 aa21.46■■□□□ 1.03
TRIM35-203ENST00000521253 ZNF513Q8N8E2 541 aaPredicted RBP21.46■■□□□ 1.03
TRIM35-203ENST00000521253 ZNF397Q8NF99 534 aaPredicted RBP21.46■■□□□ 1.03
TRIM35-203ENST00000521253 KCNV2Q8TDN2 545 aa21.46■■□□□ 1.03
TRIM35-203ENST00000521253 TMA16Q96EY4 203 aaKnown RBP21.46■■□□□ 1.03
TRIM35-203ENST00000521253 FAM204AQ9H8W3 233 aa21.46■■□□□ 1.03
TRIM35-203ENST00000521253 SLC27A6Q9Y2P4 619 aa21.46■■□□□ 1.03
TRIM35-203ENST00000521253 STARD13Q9Y3M8 1113 aa21.46■■□□□ 1.03
TRIM35-203ENST00000521253 ADAM23O75077 832 aa21.45■■□□□ 1.02
TRIM35-203ENST00000521253 APBB3O95704 486 aa21.45■■□□□ 1.02
TRIM35-203ENST00000521253 MOCS2O96007 188 aaPredicted RBP21.45■■□□□ 1.02
TRIM35-203ENST00000521253 SERPINC1P01008 464 aa21.45■■□□□ 1.02
TRIM35-203ENST00000521253 CYP1A1P04798 512 aaPredicted RBP21.45■■□□□ 1.02
TRIM35-203ENST00000521253 TPM4P67936 248 aa21.45■■□□□ 1.02
TRIM35-203ENST00000521253 CRY1Q16526 586 aa21.45■■□□□ 1.02
TRIM35-203ENST00000521253 PIK3R6Q5UE93 754 aa21.45■■□□□ 1.02
TRIM35-203ENST00000521253 SUMF1Q8NBK3 374 aa21.45■■□□□ 1.02
TRIM35-203ENST00000521253 MSANTD4Q8NCY6 345 aa21.45■■□□□ 1.02
TRIM35-203ENST00000521253 EPC1Q9H2F5 836 aa21.45■■□□□ 1.02
TRIM35-203ENST00000521253 DDIT4Q9NX09 232 aa21.45■■□□□ 1.02
TRIM35-203ENST00000521253 XPO7Q9UIA9 1087 aaKnown RBP21.45■■□□□ 1.02
TRIM35-203ENST00000521253 CCDC163A0A0D9SF12 145 aa21.44■■□□□ 1.02
TRIM35-203ENST00000521253 A0A1W2PQC6 194 aa21.44■■□□□ 1.02
TRIM35-203ENST00000521253 HRO43593 1189 aa21.44■■□□□ 1.02
TRIM35-203ENST00000521253 APOEP02649 317 aa21.44■■□□□ 1.02
TRIM35-203ENST00000521253 HNRNPLP14866 589 aaKnown RBP eCLIP21.44■■□□□ 1.02
TRIM35-203ENST00000521253 SCNN1AP37088 669 aa21.44■■□□□ 1.02
TRIM35-203ENST00000521253 RNASE9P60153 205 aaKnown RBP21.44■■□□□ 1.02
TRIM35-203ENST00000521253 SRSF5Q13243 272 aaKnown RBP21.44■■□□□ 1.02
TRIM35-203ENST00000521253 NR1I3Q14994 352 aa21.44■■□□□ 1.02
TRIM35-203ENST00000521253 GEN1Q17RS7 908 aa21.44■■□□□ 1.02
TRIM35-203ENST00000521253 FAM102AQ5T9C2 384 aaPredicted RBP21.44■■□□□ 1.02
TRIM35-203ENST00000521253 EGFLAMQ63HQ2 1017 aa21.44■■□□□ 1.02
TRIM35-203ENST00000521253 TMEM92Q6UXU6 159 aa21.44■■□□□ 1.02
TRIM35-203ENST00000521253 TSTD1Q8NFU3 115 aa21.44■■□□□ 1.02
TRIM35-203ENST00000521253 BAP1Q92560 729 aa21.44■■□□□ 1.02
TRIM35-203ENST00000521253 PCDHB18PQ96TA0 734 aa21.44■■□□□ 1.02
TRIM35-203ENST00000521253 SLC2A11Q9BYW1 496 aa21.44■■□□□ 1.02
TRIM35-203ENST00000521253 NUCKS1Q9H1E3 243 aaKnown RBP21.44■■□□□ 1.02
TRIM35-203ENST00000521253 EP300Q09472 2414 aaPredicted RBP21.43■■□□□ 1.02
TRIM35-203ENST00000521253 SYNJ2BP-COX16A0A087WUM0 186 aa21.43■■□□□ 1.02
TRIM35-203ENST00000521253 GBP1P32455 592 aa21.43■■□□□ 1.02
TRIM35-203ENST00000521253 NOS2P35228 1153 aa21.43■■□□□ 1.02
TRIM35-203ENST00000521253 MATKP42679 507 aa21.43■■□□□ 1.02
TRIM35-203ENST00000521253 DGKEP52429 567 aa21.43■■□□□ 1.02
TRIM35-203ENST00000521253 FANCCQ00597 558 aa21.43■■□□□ 1.02
TRIM35-203ENST00000521253 EOGTQ5NDL2 527 aa21.43■■□□□ 1.02
TRIM35-203ENST00000521253 TRIM72Q6ZMU5 477 aa21.43■■□□□ 1.02
TRIM35-203ENST00000521253 MMS22LQ6ZRQ5 1243 aa21.43■■□□□ 1.02
TRIM35-203ENST00000521253 TRMT11Q7Z4G4 463 aaKnown RBP21.43■■□□□ 1.02
TRIM35-203ENST00000521253 SLC30A5Q8TAD4 765 aa21.43■■□□□ 1.02
TRIM35-203ENST00000521253 MYEOVQ96EZ4 313 aa21.43■■□□□ 1.02
TRIM35-203ENST00000521253 PRICKLE1Q96MT3 831 aaPredicted RBP21.43■■□□□ 1.02
TRIM35-203ENST00000521253 ACOX2Q99424 681 aa21.43■■□□□ 1.02
TRIM35-203ENST00000521253 DDX50Q9BQ39 737 aaKnown RBP21.43■■□□□ 1.02
TRIM35-203ENST00000521253 IRX2Q9BZI1 471 aaPredicted RBP21.43■■□□□ 1.02
TRIM35-203ENST00000521253 SLTMQ9NWH9 1034 aaKnown RBP eCLIP21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms