RNA–Protein interactions for RNA: ENST00000520399.1

ERGIC1-208, Transcript of endoplasmic reticulum-golgi intermediate compartment 1, humanhuman

TSL 1 (best)

Gene ERGIC1, Length 5,687 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC1-208ENST00000520399 RAB21Q9UL25 225 aa12.42□□□□□ -0.42
ERGIC1-208ENST00000520399 M0QYT0 321 aa12.42□□□□□ -0.42
ERGIC1-208ENST00000520399 ALBP02768 609 aa12.42□□□□□ -0.42
ERGIC1-208ENST00000520399 PGK2P07205 417 aa12.42□□□□□ -0.42
ERGIC1-208ENST00000520399 MAPTP10636 758 aaKnown RBP12.42□□□□□ -0.42
ERGIC1-208ENST00000520399 ALDH1A3P47895 512 aa12.42□□□□□ -0.42
ERGIC1-208ENST00000520399 GEMP55040 296 aa12.42□□□□□ -0.42
ERGIC1-208ENST00000520399 NTRK3Q16288 839 aa12.42□□□□□ -0.42
ERGIC1-208ENST00000520399 NFIL3Q16649 462 aa12.42□□□□□ -0.42
ERGIC1-208ENST00000520399 LRRC74BQ6ZQY2 392 aa12.42□□□□□ -0.42
ERGIC1-208ENST00000520399 DENND5BQ6ZUT9 1274 aa12.42□□□□□ -0.42
ERGIC1-208ENST00000520399 ZNF720Q7Z2F6 126 aa12.42□□□□□ -0.42
ERGIC1-208ENST00000520399 PLEKHH3Q7Z736 793 aa12.42□□□□□ -0.42
ERGIC1-208ENST00000520399 FBXL16Q8N461 479 aa12.42□□□□□ -0.42
ERGIC1-208ENST00000520399 SHCBP1Q8NEM2 672 aa12.42□□□□□ -0.42
ERGIC1-208ENST00000520399 CPB2Q96IY4 423 aa12.42□□□□□ -0.42
ERGIC1-208ENST00000520399 TINF2Q9BSI4 451 aa12.42□□□□□ -0.42
ERGIC1-208ENST00000520399 TMEM106CQ9BVX2 250 aa12.42□□□□□ -0.42
ERGIC1-208ENST00000520399 CHID1Q9BWS9 393 aa12.42□□□□□ -0.42
ERGIC1-208ENST00000520399 REXO4Q9GZR2 422 aaKnown RBP12.42□□□□□ -0.42
ERGIC1-208ENST00000520399 ZCWPW1Q9H0M4 648 aa12.42□□□□□ -0.42
ERGIC1-208ENST00000520399 WDCPQ9H6R7 721 aa12.42□□□□□ -0.42
ERGIC1-208ENST00000520399 A0A087X0T9 212 aa12.42□□□□□ -0.42
ERGIC1-208ENST00000520399 H7C4K7 107 aa12.42□□□□□ -0.42
ERGIC1-208ENST00000520399 MAP2K7O14733 419 aa12.42□□□□□ -0.42
ERGIC1-208ENST00000520399 FAM228BP0C875 321 aa12.42□□□□□ -0.42
ERGIC1-208ENST00000520399 ENO3P13929 434 aaPredicted RBP12.42□□□□□ -0.42
ERGIC1-208ENST00000520399 USP46P62068 366 aa12.42□□□□□ -0.42
ERGIC1-208ENST00000520399 ZNF618Q5T7W0 954 aa12.42□□□□□ -0.42
ERGIC1-208ENST00000520399 CHSY1Q86X52 802 aa12.42□□□□□ -0.42
ERGIC1-208ENST00000520399 COMMD2Q86X83 199 aa12.42□□□□□ -0.42
ERGIC1-208ENST00000520399 MAB21L3Q8N8X9 362 aa12.42□□□□□ -0.42
ERGIC1-208ENST00000520399 WDR36Q8NI36 951 aaKnown RBP12.42□□□□□ -0.42
ERGIC1-208ENST00000520399 BORCS5Q969J3 196 aa12.42□□□□□ -0.42
ERGIC1-208ENST00000520399 SPASTQ9UBP0 616 aa12.42□□□□□ -0.42
ERGIC1-208ENST00000520399 TMCC3Q9ULS5 477 aa12.42□□□□□ -0.42
ERGIC1-208ENST00000520399 CDY2AQ9Y6F7 541 aa12.42□□□□□ -0.42
ERGIC1-208ENST00000520399 CDY1Q9Y6F8 540 aa12.42□□□□□ -0.42
ERGIC1-208ENST00000520399 PIPSLA2A3N6 862 aa12.42□□□□□ -0.42
ERGIC1-208ENST00000520399 SLC2A3P11169 496 aa12.42□□□□□ -0.42
ERGIC1-208ENST00000520399 RAP1GAPP47736 663 aa12.42□□□□□ -0.42
ERGIC1-208ENST00000520399 PKN2Q16513 984 aaKnown RBP12.42□□□□□ -0.42
ERGIC1-208ENST00000520399 AMHR2Q16671 573 aa12.42□□□□□ -0.42
ERGIC1-208ENST00000520399 GNASQ5JWF2 1037 aa12.42□□□□□ -0.42
ERGIC1-208ENST00000520399 PTRHD1Q6GMV3 140 aaKnown RBP12.42□□□□□ -0.42
ERGIC1-208ENST00000520399 RNF180Q86T96 592 aa12.42□□□□□ -0.42
ERGIC1-208ENST00000520399 ACTRT1Q8TDG2 376 aa12.42□□□□□ -0.42
ERGIC1-208ENST00000520399 KLF6Q99612 283 aaPredicted RBP12.42□□□□□ -0.42
ERGIC1-208ENST00000520399 CBWD1Q9BRT8 395 aa12.42□□□□□ -0.42
ERGIC1-208ENST00000520399 THTPAQ9BU02 230 aa12.42□□□□□ -0.42
ERGIC1-208ENST00000520399 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.42□□□□□ -0.42
ERGIC1-208ENST00000520399 VWA5AO00534 786 aa12.41□□□□□ -0.42
ERGIC1-208ENST00000520399 CDC40O60508 579 aaKnown RBP eCLIP12.41□□□□□ -0.42
ERGIC1-208ENST00000520399 STAG3L1P0CL83 205 aa12.41□□□□□ -0.42
ERGIC1-208ENST00000520399 AKAP5P24588 427 aa12.41□□□□□ -0.42
ERGIC1-208ENST00000520399 CDC25CP30307 473 aa12.41□□□□□ -0.42
ERGIC1-208ENST00000520399 TTKP33981 857 aa12.41□□□□□ -0.42
ERGIC1-208ENST00000520399 MAPKAPK2P49137 400 aa12.41□□□□□ -0.42
ERGIC1-208ENST00000520399 ORC1Q13415 861 aa12.41□□□□□ -0.42
ERGIC1-208ENST00000520399 TFDP3Q5H9I0 405 aa12.41□□□□□ -0.42
ERGIC1-208ENST00000520399 POMGNT2Q8NAT1 580 aa12.41□□□□□ -0.42
ERGIC1-208ENST00000520399 UXS1Q8NBZ7 420 aa12.41□□□□□ -0.42
ERGIC1-208ENST00000520399 JADE3Q92613 823 aa12.41□□□□□ -0.42
ERGIC1-208ENST00000520399 PACSIN1Q9BY11 444 aa12.41□□□□□ -0.42
ERGIC1-208ENST00000520399 RHOBTB2Q9BYZ6 727 aa12.41□□□□□ -0.42
ERGIC1-208ENST00000520399 CROTQ9UKG9 612 aa12.41□□□□□ -0.42
ERGIC1-208ENST00000520399 C1orf232A0A0U1RR37 186 aa12.41□□□□□ -0.42
ERGIC1-208ENST00000520399 DDTLA6NHG4 134 aaPredicted RBP12.41□□□□□ -0.42
ERGIC1-208ENST00000520399 HUNKP57058 714 aa12.41□□□□□ -0.42
ERGIC1-208ENST00000520399 CDKAL1Q5VV42 579 aa12.41□□□□□ -0.42
ERGIC1-208ENST00000520399 PRPF39Q86UA1 669 aaKnown RBP12.41□□□□□ -0.42
ERGIC1-208ENST00000520399 LRRC34Q8IZ02 419 aa12.41□□□□□ -0.42
ERGIC1-208ENST00000520399 ZNF669Q96BR6 464 aaPredicted RBP12.41□□□□□ -0.42
ERGIC1-208ENST00000520399 CAMKK2Q96RR4 588 aa12.41□□□□□ -0.42
ERGIC1-208ENST00000520399 UBOX5O94941 541 aa12.41□□□□□ -0.42
ERGIC1-208ENST00000520399 CSNK2BP67870 215 aa12.41□□□□□ -0.42
ERGIC1-208ENST00000520399 PGM5Q15124 567 aa12.41□□□□□ -0.42
ERGIC1-208ENST00000520399 CLEC16AQ2KHT3 1053 aa12.41□□□□□ -0.42
ERGIC1-208ENST00000520399 ZRANB3Q5FWF4 1079 aa12.41□□□□□ -0.42
ERGIC1-208ENST00000520399 PAPD7Q5XG87 772 aaKnown RBP12.41□□□□□ -0.42
ERGIC1-208ENST00000520399 FBXO16Q8IX29 292 aaPredicted RBP12.41□□□□□ -0.42
ERGIC1-208ENST00000520399 TRPC4APQ8TEL6 797 aa12.41□□□□□ -0.42
ERGIC1-208ENST00000520399 COLEC11Q9BWP8 271 aa12.41□□□□□ -0.42
ERGIC1-208ENST00000520399 EPS8L2Q9H6S3 715 aa12.41□□□□□ -0.42
ERGIC1-208ENST00000520399 C12orf4Q9NQ89 552 aa12.41□□□□□ -0.42
ERGIC1-208ENST00000520399 ADARB2Q9NS39 739 aaKnown RBP12.41□□□□□ -0.42
ERGIC1-208ENST00000520399 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.41□□□□□ -0.42
ERGIC1-208ENST00000520399 B2RBV5 119 aa12.41□□□□□ -0.42
ERGIC1-208ENST00000520399 SASH3O75995 380 aa12.41□□□□□ -0.42
ERGIC1-208ENST00000520399 LSM8O95777 96 aaKnown RBP12.41□□□□□ -0.42
ERGIC1-208ENST00000520399 RPN2P04844 631 aa12.41□□□□□ -0.42
ERGIC1-208ENST00000520399 THPOP40225 353 aa12.41□□□□□ -0.42
ERGIC1-208ENST00000520399 CASP5P51878 434 aa12.41□□□□□ -0.42
ERGIC1-208ENST00000520399 IST1P53990 364 aa12.41□□□□□ -0.42
ERGIC1-208ENST00000520399 TWF1Q12792 350 aa12.41□□□□□ -0.42
ERGIC1-208ENST00000520399 FBXO42Q6P3S6 717 aa12.41□□□□□ -0.42
ERGIC1-208ENST00000520399 TXNRD3Q86VQ6 643 aa12.41□□□□□ -0.42
ERGIC1-208ENST00000520399 ADGRF2Q8IZF7 708 aa12.41□□□□□ -0.42
ERGIC1-208ENST00000520399 S100A13Q99584 98 aa12.41□□□□□ -0.42
ERGIC1-208ENST00000520399 ADGRA2Q96PE1 1338 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms