RNA–Protein interactions for RNA: ENST00000519767.5

VEGFA-220, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 970 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-220ENST00000519767 SYNCRIPO60506 623 aaKnown RBP26.41■■□□□ 1.82
VEGFA-220ENST00000519767 ITPKAP23677 461 aa26.41■■□□□ 1.82
VEGFA-220ENST00000519767 BRD2P25440 801 aaKnown RBP26.41■■□□□ 1.82
VEGFA-220ENST00000519767 ZNF33AQ06730 810 aa26.41■■□□□ 1.82
VEGFA-220ENST00000519767 DUOXA1Q1HG43 343 aa26.41■■□□□ 1.82
VEGFA-220ENST00000519767 ARHGEF19Q8IW93 802 aa26.41■■□□□ 1.82
VEGFA-220ENST00000519767 NUP205Q92621 2012 aa26.41■■□□□ 1.82
VEGFA-220ENST00000519767 NDUFS2O75306 463 aa26.4■■□□□ 1.82
VEGFA-220ENST00000519767 GABBR2O75899 941 aa26.4■■□□□ 1.82
VEGFA-220ENST00000519767 LTFP02788 710 aa26.4■■□□□ 1.82
VEGFA-220ENST00000519767 SLC11A2P49281 568 aa26.4■■□□□ 1.82
VEGFA-220ENST00000519767 ARID5AQ03989 594 aa26.4■■□□□ 1.82
VEGFA-220ENST00000519767 AZIN2Q96A70 460 aa26.4■■□□□ 1.82
VEGFA-220ENST00000519767 FAM81BQ96LP2 452 aa26.4■■□□□ 1.82
VEGFA-220ENST00000519767 CNTNAP3BQ96NU0 1288 aa26.4■■□□□ 1.82
VEGFA-220ENST00000519767 CNTNAP3Q9BZ76 1288 aa26.4■■□□□ 1.82
VEGFA-220ENST00000519767 INTS2Q9H0H0 1204 aaKnown RBP26.4■■□□□ 1.82
VEGFA-220ENST00000519767 PRDM16Q9HAZ2 1276 aa26.4■■□□□ 1.82
VEGFA-220ENST00000519767 KIAA1468Q9P260 1216 aa26.4■■□□□ 1.82
VEGFA-220ENST00000519767 CLEC4EQ9ULY5 219 aa26.4■■□□□ 1.82
VEGFA-220ENST00000519767 SLC6A14Q9UN76 642 aa26.4■■□□□ 1.82
VEGFA-220ENST00000519767 CYP8B1Q9UNU6 501 aa26.4■■□□□ 1.82
VEGFA-220ENST00000519767 SART1O43290 800 aaKnown RBP26.39■■□□□ 1.82
VEGFA-220ENST00000519767 UBE2HP62256 183 aa26.39■■□□□ 1.82
VEGFA-220ENST00000519767 RING1Q06587 406 aa26.39■■□□□ 1.82
VEGFA-220ENST00000519767 FUT11Q495W5 492 aa26.39■■□□□ 1.82
VEGFA-220ENST00000519767 MPP7Q5T2T1 576 aa26.39■■□□□ 1.82
VEGFA-220ENST00000519767 NUGGCQ68CJ6 796 aa26.39■■□□□ 1.82
VEGFA-220ENST00000519767 ENOSF1Q7L5Y1 443 aa26.39■■□□□ 1.82
VEGFA-220ENST00000519767 STK32AQ8WU08 396 aa26.39■■□□□ 1.82
VEGFA-220ENST00000519767 FOXJ1Q92949 421 aa26.39■■□□□ 1.82
VEGFA-220ENST00000519767 ZNF419Q96HQ0 510 aaPredicted RBP26.39■■□□□ 1.82
VEGFA-220ENST00000519767 KREMEN1Q96MU8 473 aa26.39■■□□□ 1.82
VEGFA-220ENST00000519767 CIPCQ9C0C6 399 aa26.39■■□□□ 1.82
VEGFA-220ENST00000519767 UBE2TQ9NPD8 197 aaPredicted RBP26.39■■□□□ 1.82
VEGFA-220ENST00000519767 ITM2CQ9NQX7 267 aa26.39■■□□□ 1.82
VEGFA-220ENST00000519767 RWDD2AQ9UIY3 292 aa26.39■■□□□ 1.82
VEGFA-220ENST00000519767 PLA2G4CQ9UP65 541 aa26.39■■□□□ 1.82
VEGFA-220ENST00000519767 IRAK2O43187 625 aa26.38■■□□□ 1.81
VEGFA-220ENST00000519767 MED7O43513 233 aa26.38■■□□□ 1.81
VEGFA-220ENST00000519767 TSPAN3O60637 253 aa26.38■■□□□ 1.81
VEGFA-220ENST00000519767 SERPINF2P08697 491 aa26.38■■□□□ 1.81
VEGFA-220ENST00000519767 KRT5P13647 590 aa26.38■■□□□ 1.81
VEGFA-220ENST00000519767 CSRP1P21291 193 aaKnown RBP26.38■■□□□ 1.81
VEGFA-220ENST00000519767 HOXD9P28356 352 aaPredicted RBP26.38■■□□□ 1.81
VEGFA-220ENST00000519767 IL12RB1P42701 662 aa26.38■■□□□ 1.81
VEGFA-220ENST00000519767 ACADSBP45954 432 aa26.38■■□□□ 1.81
VEGFA-220ENST00000519767 RPL34P49207 117 aaKnown RBP26.38■■□□□ 1.81
VEGFA-220ENST00000519767 GFPT1Q06210 699 aaPredicted RBP26.38■■□□□ 1.81
VEGFA-220ENST00000519767 ZNF234Q14588 700 aa26.38■■□□□ 1.81
VEGFA-220ENST00000519767 MEA1Q16626 185 aa26.38■■□□□ 1.81
VEGFA-220ENST00000519767 SYCP2LQ5T4T6 812 aa26.38■■□□□ 1.81
VEGFA-220ENST00000519767 KIAA1324Q6UXG2 1013 aaKnown RBP26.38■■□□□ 1.81
VEGFA-220ENST00000519767 DEFB119Q8N690 84 aa26.38■■□□□ 1.81
VEGFA-220ENST00000519767 ZNF557Q8N988 423 aaPredicted RBP26.38■■□□□ 1.81
VEGFA-220ENST00000519767 WFIKKN2Q8TEU8 576 aa26.38■■□□□ 1.81
VEGFA-220ENST00000519767 ERLEC1Q96DZ1 483 aa26.38■■□□□ 1.81
VEGFA-220ENST00000519767 TRIM62Q9BVG3 475 aa26.38■■□□□ 1.81
VEGFA-220ENST00000519767 PLXND1Q9Y4D7 1925 aa26.37■■□□□ 1.81
VEGFA-220ENST00000519767 MSI1O43347 362 aaKnown RBP26.37■■□□□ 1.81
VEGFA-220ENST00000519767 IGLV3-27P01718 113 aa26.37■■□□□ 1.81
VEGFA-220ENST00000519767 CFIP05156 583 aa26.37■■□□□ 1.81
VEGFA-220ENST00000519767 ENGP17813 658 aa26.37■■□□□ 1.81
VEGFA-220ENST00000519767 OXTRP30559 389 aa26.37■■□□□ 1.81
VEGFA-220ENST00000519767 GPD2P43304 727 aa26.37■■□□□ 1.81
VEGFA-220ENST00000519767 PSAPL1Q6NUJ1 521 aa26.37■■□□□ 1.81
VEGFA-220ENST00000519767 SCUBE3Q8IX30 993 aa26.37■■□□□ 1.81
VEGFA-220ENST00000519767 DDX50Q9BQ39 737 aaKnown RBP26.37■■□□□ 1.81
VEGFA-220ENST00000519767 ANGPTL2Q9UKU9 493 aa26.37■■□□□ 1.81
VEGFA-220ENST00000519767 PIK3R2O00459 728 aa26.36■■□□□ 1.81
VEGFA-220ENST00000519767 NCAM1P13591 858 aa26.36■■□□□ 1.81
VEGFA-220ENST00000519767 CEACAM1P13688 526 aa26.36■■□□□ 1.81
VEGFA-220ENST00000519767 PMLP29590 882 aa26.36■■□□□ 1.81
VEGFA-220ENST00000519767 CD6P30203 668 aa26.36■■□□□ 1.81
VEGFA-220ENST00000519767 NOVA1P51513 510 aaKnown RBP26.36■■□□□ 1.81
VEGFA-220ENST00000519767 TBX4P57082 545 aa26.36■■□□□ 1.81
VEGFA-220ENST00000519767 SMYD5Q6GMV2 418 aa26.36■■□□□ 1.81
VEGFA-220ENST00000519767 SERPINA13PQ6UXR4 307 aa26.36■■□□□ 1.81
VEGFA-220ENST00000519767 BEND5Q7L4P6 421 aa26.36■■□□□ 1.81
VEGFA-220ENST00000519767 TMPRSS6Q8IU80 811 aa26.36■■□□□ 1.81
VEGFA-220ENST00000519767 MKRN2Q9H000 416 aaKnown RBP26.36■■□□□ 1.81
VEGFA-220ENST00000519767 MIS12Q9H081 205 aa26.36■■□□□ 1.81
VEGFA-220ENST00000519767 SLC6A17Q9H1V8 727 aa26.36■■□□□ 1.81
VEGFA-220ENST00000519767 ACSL4O60488 711 aa26.35■■□□□ 1.81
VEGFA-220ENST00000519767 ATXN3P54252 364 aaPredicted RBP26.35■■□□□ 1.81
VEGFA-220ENST00000519767 SHC2P98077 582 aa26.35■■□□□ 1.81
VEGFA-220ENST00000519767 CAMK4Q16566 473 aa26.35■■□□□ 1.81
VEGFA-220ENST00000519767 UAP1L1Q3KQV9 507 aa26.35■■□□□ 1.81
VEGFA-220ENST00000519767 WDR45BQ5MNZ6 344 aa26.35■■□□□ 1.81
VEGFA-220ENST00000519767 TMEM215Q68D42 235 aa26.35■■□□□ 1.81
VEGFA-220ENST00000519767 KIAA0907Q7Z7F0 614 aaPredicted RBP26.35■■□□□ 1.81
VEGFA-220ENST00000519767 SLC41A1Q8IVJ1 513 aa26.35■■□□□ 1.81
VEGFA-220ENST00000519767 DDX51Q8N8A6 666 aaKnown RBP eCLIP26.35■■□□□ 1.817e-8■■□□□ 11.5
VEGFA-220ENST00000519767 PRCCQ92733 491 aaPredicted RBP26.35■■□□□ 1.81
VEGFA-220ENST00000519767 SIPA1Q96FS4 1042 aa26.35■■□□□ 1.81
VEGFA-220ENST00000519767 HSPA12BQ96MM6 686 aa26.35■■□□□ 1.81
VEGFA-220ENST00000519767 ST7Q9NRC1 585 aa26.35■■□□□ 1.81
VEGFA-220ENST00000519767 WSB2Q9NYS7 404 aaPredicted RBP26.35■■□□□ 1.81
VEGFA-220ENST00000519767 USP36Q9P275 1121 aaKnown RBP26.35■■□□□ 1.81
VEGFA-220ENST00000519767 SUSD2Q9UGT4 822 aa26.35■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms