RNA–Protein interactions for RNA: ENST00000519489.1

CTNNA1-216, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 358 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-216ENST00000519489 SORCS1Q8WY21 1168 aa7.22□□□□□ -1.25
CTNNA1-216ENST00000519489 HAS1Q92839 578 aa7.22□□□□□ -1.25
CTNNA1-216ENST00000519489 ZBTB45Q96K62 511 aaPredicted RBP7.22□□□□□ -1.25
CTNNA1-216ENST00000519489 ACO2Q99798 780 aaKnown RBP7.22□□□□□ -1.25
CTNNA1-216ENST00000519489 CCDC94Q9BW85 323 aaPredicted RBP7.22□□□□□ -1.25
CTNNA1-216ENST00000519489 GLT8D2Q9H1C3 349 aa7.22□□□□□ -1.25
CTNNA1-216ENST00000519489 LHX5Q9H2C1 402 aa7.22□□□□□ -1.25
CTNNA1-216ENST00000519489 ERVMER34-1Q9H9K5 563 aa7.22□□□□□ -1.25
CTNNA1-216ENST00000519489 KCNMB3Q9NPA1 279 aa7.22□□□□□ -1.25
CTNNA1-216ENST00000519489 TOPORSQ9NS56 1045 aaPredicted RBP7.22□□□□□ -1.25
CTNNA1-216ENST00000519489 CROCCQ5TZA2 2017 aa7.22□□□□□ -1.25
CTNNA1-216ENST00000519489 ANAPC1Q9H1A4 1944 aa7.21□□□□□ -1.25
CTNNA1-216ENST00000519489 CCDC187A0A096LP49 1063 aa7.21□□□□□ -1.26
CTNNA1-216ENST00000519489 PRAMEF33A0A0G2JMD5 474 aa7.21□□□□□ -1.26
CTNNA1-216ENST00000519489 PLD2O14939 933 aa7.21□□□□□ -1.26
CTNNA1-216ENST00000519489 DUX1O43812 170 aa7.21□□□□□ -1.26
CTNNA1-216ENST00000519489 PRAMEF10O60809 474 aa7.21□□□□□ -1.26
CTNNA1-216ENST00000519489 GP1BAP07359 652 aa7.21□□□□□ -1.26
CTNNA1-216ENST00000519489 ACADMP11310 421 aa7.21□□□□□ -1.26
CTNNA1-216ENST00000519489 PROZP22891 400 aa7.21□□□□□ -1.26
CTNNA1-216ENST00000519489 ETV5P41161 510 aa7.21□□□□□ -1.26
CTNNA1-216ENST00000519489 SSRP1Q08945 709 aaKnown RBP7.21□□□□□ -1.26
CTNNA1-216ENST00000519489 STARD3Q14849 445 aa7.21□□□□□ -1.26
CTNNA1-216ENST00000519489 PFKFB3Q16875 520 aaPredicted RBP7.21□□□□□ -1.26
CTNNA1-216ENST00000519489 GEN1Q17RS7 908 aa7.21□□□□□ -1.26
CTNNA1-216ENST00000519489 SMTNL2Q2TAL5 461 aa7.21□□□□□ -1.26
CTNNA1-216ENST00000519489 PERM1Q5SV97 790 aa7.21□□□□□ -1.26
CTNNA1-216ENST00000519489 C20orf194Q5TEA3 1177 aa7.21□□□□□ -1.26
CTNNA1-216ENST00000519489 BTBD8Q5XKL5 378 aa7.21□□□□□ -1.26
CTNNA1-216ENST00000519489 WSCD1Q658N2 575 aa7.21□□□□□ -1.26
CTNNA1-216ENST00000519489 GUSBP11Q6P575 273 aa7.21□□□□□ -1.26
CTNNA1-216ENST00000519489 TICAM2Q86XR7 235 aa7.21□□□□□ -1.26
CTNNA1-216ENST00000519489 JAMLQ86YT9 394 aa7.21□□□□□ -1.26
CTNNA1-216ENST00000519489 ZBTB8OSQ8IWT0 167 aa7.21□□□□□ -1.26
CTNNA1-216ENST00000519489 TPH2Q8IWU9 490 aa7.21□□□□□ -1.26
CTNNA1-216ENST00000519489 ZNF366Q8N895 744 aa7.21□□□□□ -1.26
CTNNA1-216ENST00000519489 C2orf15Q8WU43 125 aaKnown RBP7.21□□□□□ -1.26
CTNNA1-216ENST00000519489 SCFD1Q8WVM8 642 aa7.21□□□□□ -1.26
CTNNA1-216ENST00000519489 RILPL2Q969X0 211 aa7.21□□□□□ -1.26
CTNNA1-216ENST00000519489 ZSWIM4Q9H7M6 989 aa7.21□□□□□ -1.26
CTNNA1-216ENST00000519489 RPF1Q9H9Y2 349 aaKnown RBP7.21□□□□□ -1.26
CTNNA1-216ENST00000519489 AASDHPPTQ9NRN7 309 aa7.21□□□□□ -1.26
CTNNA1-216ENST00000519489 UXTQ9UBK9 157 aaPredicted RBP7.21□□□□□ -1.26
CTNNA1-216ENST00000519489 PCDHB5Q9Y5E4 795 aa7.21□□□□□ -1.26
CTNNA1-216ENST00000519489 SNX14Q9Y5W7 946 aa7.21□□□□□ -1.26
CTNNA1-216ENST00000519489 RTTNQ86VV8 2226 aa7.21□□□□□ -1.26
CTNNA1-216ENST00000519489 CCDC69A6NI79 296 aa7.2□□□□□ -1.26
CTNNA1-216ENST00000519489 NEDD8-MDP1E9PL57 170 aa7.2□□□□□ -1.26
CTNNA1-216ENST00000519489 hCG_1984214I3L0E3 225 aa7.2□□□□□ -1.26
CTNNA1-216ENST00000519489 NKX2-8O15522 239 aa7.2□□□□□ -1.26
CTNNA1-216ENST00000519489 ANP32CO43423 234 aa7.2□□□□□ -1.26
CTNNA1-216ENST00000519489 FAM155BO75949 473 aa7.2□□□□□ -1.26
CTNNA1-216ENST00000519489 LYPLA2O95372 231 aa7.2□□□□□ -1.26
CTNNA1-216ENST00000519489 C4BPAP04003 597 aaKnown RBP7.2□□□□□ -1.26
CTNNA1-216ENST00000519489 TYRP14679 529 aa7.2□□□□□ -1.26
CTNNA1-216ENST00000519489 SLC6A4P31645 630 aa7.2□□□□□ -1.26
CTNNA1-216ENST00000519489 ARSDP51689 593 aa7.2□□□□□ -1.26
CTNNA1-216ENST00000519489 GALCP54803 685 aa7.2□□□□□ -1.26
CTNNA1-216ENST00000519489 RPS14P62263 151 aaKnown RBP7.2□□□□□ -1.26
CTNNA1-216ENST00000519489 ZNF234Q14588 700 aa7.2□□□□□ -1.26
CTNNA1-216ENST00000519489 ZNF568Q3ZCX4 644 aa7.2□□□□□ -1.26
CTNNA1-216ENST00000519489 TMEM215Q68D42 235 aa7.2□□□□□ -1.26
CTNNA1-216ENST00000519489 SCARA3Q6AZY7 606 aa7.2□□□□□ -1.26
CTNNA1-216ENST00000519489 RBM44Q6ZP01 1051 aaKnown RBP7.2□□□□□ -1.26
CTNNA1-216ENST00000519489 CXXC5Q7LFL8 322 aaKnown RBP7.2□□□□□ -1.26
CTNNA1-216ENST00000519489 RALYLQ86SE5 291 aaKnown RBP7.2□□□□□ -1.26
CTNNA1-216ENST00000519489 ZNF713Q8N859 430 aaPredicted RBP7.2□□□□□ -1.26
CTNNA1-216ENST00000519489 HSD17B14Q9BPX1 270 aa7.2□□□□□ -1.26
CTNNA1-216ENST00000519489 TARS2Q9BW92 718 aaKnown RBP7.2□□□□□ -1.26
CTNNA1-216ENST00000519489 HAPLN2Q9GZV7 340 aa7.2□□□□□ -1.26
CTNNA1-216ENST00000519489 BTBD1Q9H0C5 482 aa7.2□□□□□ -1.26
CTNNA1-216ENST00000519489 ABCG4Q9H172 646 aa7.2□□□□□ -1.26
CTNNA1-216ENST00000519489 PREBQ9HCU5 417 aa7.2□□□□□ -1.26
CTNNA1-216ENST00000519489 FBXO10Q9UK96 956 aa7.2□□□□□ -1.26
CTNNA1-216ENST00000519489 BRPF3Q9ULD4 1205 aa7.2□□□□□ -1.26
CTNNA1-216ENST00000519489 CLEC4EQ9ULY5 219 aa7.2□□□□□ -1.26
CTNNA1-216ENST00000519489 CA5BQ9Y2D0 317 aa7.2□□□□□ -1.26
CTNNA1-216ENST00000519489 MAP1AP78559 2803 aaPredicted RBP7.2□□□□□ -1.26
CTNNA1-216ENST00000519489 FAM47DPA6NHR8 397 aa7.19□□□□□ -1.26
CTNNA1-216ENST00000519489 C9orf172C9J069 976 aa7.19□□□□□ -1.26
CTNNA1-216ENST00000519489 AGRPO00253 132 aa7.19□□□□□ -1.26
CTNNA1-216ENST00000519489 NVLO15381 856 aaKnown RBP7.19□□□□□ -1.26
CTNNA1-216ENST00000519489 DKC1O60832 514 aaKnown RBP eCLIP7.19□□□□□ -1.26
CTNNA1-216ENST00000519489 CXCL8P10145 99 aa7.19□□□□□ -1.26
CTNNA1-216ENST00000519489 ODC1P11926 461 aa7.19□□□□□ -1.26
CTNNA1-216ENST00000519489 HARSP12081 509 aaKnown RBP7.19□□□□□ -1.26
CTNNA1-216ENST00000519489 ITIH1P19827 911 aa7.19□□□□□ -1.26
CTNNA1-216ENST00000519489 LIFRP42702 1097 aa7.19□□□□□ -1.26
CTNNA1-216ENST00000519489 CAMK2GQ13555 558 aaPredicted RBP7.19□□□□□ -1.26
CTNNA1-216ENST00000519489 CDKN3Q16667 212 aa7.19□□□□□ -1.26
CTNNA1-216ENST00000519489 DCAF6Q58WW2 860 aa7.19□□□□□ -1.26
CTNNA1-216ENST00000519489 NCAPH2Q6IBW4 605 aa7.19□□□□□ -1.26
CTNNA1-216ENST00000519489 NCEH1Q6PIU2 408 aa7.19□□□□□ -1.26
CTNNA1-216ENST00000519489 TP53INP2Q8IXH6 220 aa7.19□□□□□ -1.26
CTNNA1-216ENST00000519489 TRIM22Q8IYM9 498 aa7.19□□□□□ -1.26
CTNNA1-216ENST00000519489 OR2T3Q8NH03 318 aa7.19□□□□□ -1.26
CTNNA1-216ENST00000519489 BHMTQ93088 406 aa7.19□□□□□ -1.26
CTNNA1-216ENST00000519489 GRAMD1AQ96CP6 724 aa7.19□□□□□ -1.26
CTNNA1-216ENST00000519489 ZNF837Q96EG3 531 aaPredicted RBP7.19□□□□□ -1.26
CTNNA1-216ENST00000519489 C2orf40Q9H1Z8 148 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms