RNA–Protein interactions for RNA: ENST00000518569.1

VPS13B-207, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-207ENST00000518569 PLEKHD1A6NEE1 506 aa4.21□□□□□ -1.74
VPS13B-207ENST00000518569 TISP43B9A030 160 aa4.21□□□□□ -1.74
VPS13B-207ENST00000518569 PRRT4C9JH25 899 aa4.21□□□□□ -1.74
VPS13B-207ENST00000518569 TMEM232C9JQI7 657 aa4.21□□□□□ -1.74
VPS13B-207ENST00000518569 SMIM22K7EJ46 135 aa4.21□□□□□ -1.74
VPS13B-207ENST00000518569 NKX2-8O15522 239 aa4.21□□□□□ -1.74
VPS13B-207ENST00000518569 NBNO60934 754 aa4.21□□□□□ -1.74
VPS13B-207ENST00000518569 LATS1O95835 1130 aa4.21□□□□□ -1.74
VPS13B-207ENST00000518569 NHLRC4P0CG21 123 aaPredicted RBP4.21□□□□□ -1.74
VPS13B-207ENST00000518569 CST5P28325 142 aaPredicted RBP4.21□□□□□ -1.74
VPS13B-207ENST00000518569 AKT1P31749 480 aa4.21□□□□□ -1.74
VPS13B-207ENST00000518569 PNLIPRP1P54315 467 aa4.21□□□□□ -1.74
VPS13B-207ENST00000518569 WDR5P61964 334 aaKnown RBP4.21□□□□□ -1.74
VPS13B-207ENST00000518569 TLE3Q04726 772 aa4.21□□□□□ -1.74
VPS13B-207ENST00000518569 PRKG1Q13976 671 aa4.21□□□□□ -1.74
VPS13B-207ENST00000518569 ZRSR2Q15696 482 aaKnown RBP4.21□□□□□ -1.74
VPS13B-207ENST00000518569 CNGA3Q16281 694 aa4.21□□□□□ -1.74
VPS13B-207ENST00000518569 TBRG1Q3YBR2 411 aa4.21□□□□□ -1.74
VPS13B-207ENST00000518569 ZNF569Q5MCW4 686 aa4.21□□□□□ -1.74
VPS13B-207ENST00000518569 TTC22Q5TAA0 569 aa4.21□□□□□ -1.74
VPS13B-207ENST00000518569 ANO1Q5XXA6 986 aa4.21□□□□□ -1.74
VPS13B-207ENST00000518569 SULT6B1Q6IMI4 303 aa4.21□□□□□ -1.74
VPS13B-207ENST00000518569 C16orf89Q6UX73 402 aa4.21□□□□□ -1.74
VPS13B-207ENST00000518569 RANBP10Q6VN20 620 aa4.21□□□□□ -1.74
VPS13B-207ENST00000518569 LAS2Q8IYD9 372 aa4.21□□□□□ -1.74
VPS13B-207ENST00000518569 PNLDC1Q8NA58 520 aaKnown RBP4.21□□□□□ -1.74
VPS13B-207ENST00000518569 PNISRQ8TF01 805 aaKnown RBP4.21□□□□□ -1.74
VPS13B-207ENST00000518569 AKAP1Q92667 903 aaKnown RBP eCLIP4.21□□□□□ -1.74
VPS13B-207ENST00000518569 P2RY11Q96G91 374 aa4.21□□□□□ -1.74
VPS13B-207ENST00000518569 SORBS1Q9BX66 1292 aaKnown RBP4.21□□□□□ -1.74
VPS13B-207ENST00000518569 SEMA4CQ9C0C4 833 aa4.21□□□□□ -1.74
VPS13B-207ENST00000518569 VPS16Q9H269 839 aa4.21□□□□□ -1.74
VPS13B-207ENST00000518569 PPCSQ9HAB8 311 aa4.21□□□□□ -1.74
VPS13B-207ENST00000518569 LIN7CQ9NUP9 197 aaKnown RBP4.21□□□□□ -1.74
VPS13B-207ENST00000518569 C19orf53Q9UNZ5 99 aaPredicted RBP4.21□□□□□ -1.74
VPS13B-207ENST00000518569 PCDHB7Q9Y5E2 793 aa4.21□□□□□ -1.74
VPS13B-207ENST00000518569 SIRT4Q9Y6E7 314 aaPredicted RBP4.21□□□□□ -1.74
VPS13B-207ENST00000518569 MORC2Q9Y6X9 1032 aaPredicted RBP4.21□□□□□ -1.74
VPS13B-207ENST00000518569 SPATA31A5Q5VU36 1347 aa4.21□□□□□ -1.74
VPS13B-207ENST00000518569 SPATA31A7Q8IWB4 1347 aa4.21□□□□□ -1.74
VPS13B-207ENST00000518569 WIPF3A6NGB9 483 aa4.2□□□□□ -1.74
VPS13B-207ENST00000518569 IPO5O00410 1097 aaKnown RBP4.2□□□□□ -1.74
VPS13B-207ENST00000518569 RBMXL2O75526 392 aaKnown RBP4.2□□□□□ -1.74
VPS13B-207ENST00000518569 FAM155BO75949 473 aa4.2□□□□□ -1.74
VPS13B-207ENST00000518569 SLC3A2P08195 630 aaKnown RBP4.2□□□□□ -1.74
VPS13B-207ENST00000518569 CYP3A4P08684 503 aa4.2□□□□□ -1.74
VPS13B-207ENST00000518569 CYP2A6P11509 494 aaPredicted RBP4.2□□□□□ -1.74
VPS13B-207ENST00000518569 GYS1P13807 737 aa4.2□□□□□ -1.74
VPS13B-207ENST00000518569 SFPQP23246 707 aaKnown RBP eCLIP4.2□□□□□ -1.74
VPS13B-207ENST00000518569 THBS4P35443 961 aa4.2□□□□□ -1.74
VPS13B-207ENST00000518569 HOXD12P35452 270 aa4.2□□□□□ -1.74
VPS13B-207ENST00000518569 RPL15P61313 204 aaKnown RBP4.2□□□□□ -1.74
VPS13B-207ENST00000518569 RBM6P78332 1123 aaKnown RBP4.2□□□□□ -1.74
VPS13B-207ENST00000518569 SF3A3Q12874 501 aaKnown RBP eCLIP4.2□□□□□ -1.74
VPS13B-207ENST00000518569 BTBD16Q32M84 506 aa4.2□□□□□ -1.74
VPS13B-207ENST00000518569 INO80DQ53TQ3 878 aaPredicted RBP4.2□□□□□ -1.74
VPS13B-207ENST00000518569 GORABQ5T7V8 394 aa4.2□□□□□ -1.74
VPS13B-207ENST00000518569 JMJD6Q6NYC1 403 aaPredicted RBP4.2□□□□□ -1.74
VPS13B-207ENST00000518569 WDR93Q6P2C0 686 aa4.2□□□□□ -1.74
VPS13B-207ENST00000518569 ZNF813Q6ZN06 617 aa4.2□□□□□ -1.74
VPS13B-207ENST00000518569 RFX8Q6ZV50 586 aa4.2□□□□□ -1.74
VPS13B-207ENST00000518569 C8orf58Q8NAV2 365 aa4.2□□□□□ -1.74
VPS13B-207ENST00000518569 SRFBP1Q8NEF9 429 aaKnown RBP4.2□□□□□ -1.74
VPS13B-207ENST00000518569 SCAMP5Q8TAC9 235 aa4.2□□□□□ -1.74
VPS13B-207ENST00000518569 ASB12Q8WXK4 309 aa4.2□□□□□ -1.74
VPS13B-207ENST00000518569 CPT1BQ92523 772 aa4.2□□□□□ -1.74
VPS13B-207ENST00000518569 MCRS1Q96EZ8 462 aa4.2□□□□□ -1.74
VPS13B-207ENST00000518569 ZNF845Q96IR2 970 aaPredicted RBP4.2□□□□□ -1.74
VPS13B-207ENST00000518569 CCDC134Q9H6E4 229 aa4.2□□□□□ -1.74
VPS13B-207ENST00000518569 MYH16Q9H6N6 1097 aa4.2□□□□□ -1.74
VPS13B-207ENST00000518569 MLXIPQ9HAP2 919 aa4.2□□□□□ -1.74
VPS13B-207ENST00000518569 SAYSD1Q9NPB0 183 aa4.2□□□□□ -1.74
VPS13B-207ENST00000518569 FLRT1Q9NZU1 646 aa4.2□□□□□ -1.74
VPS13B-207ENST00000518569 SRP68Q9UHB9 627 aaKnown RBP4.2□□□□□ -1.74
VPS13B-207ENST00000518569 DAPP1Q9UN19 280 aa4.2□□□□□ -1.74
VPS13B-207ENST00000518569 VPS4AQ9UN37 437 aa4.2□□□□□ -1.74
VPS13B-207ENST00000518569 ARID4BQ4LE39 1312 aaPredicted RBP4.2□□□□□ -1.74
VPS13B-207ENST00000518569 CYP3A7-CYP3A51PA0A087WV96 503 aa4.19□□□□□ -1.74
VPS13B-207ENST00000518569 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.19□□□□□ -1.74
VPS13B-207ENST00000518569 MBD3L5A6NJ08 208 aaPredicted RBP4.19□□□□□ -1.74
VPS13B-207ENST00000518569 C3orf70A6NLC5 250 aaPredicted RBP4.19□□□□□ -1.74
VPS13B-207ENST00000518569 SLC38A8A6NNN8 435 aa4.19□□□□□ -1.74
VPS13B-207ENST00000518569 KIF28PB7ZC32 967 aa4.19□□□□□ -1.74
VPS13B-207ENST00000518569 PIP5K1CO60331 668 aa4.19□□□□□ -1.74
VPS13B-207ENST00000518569 DHRS4L1P0CG22 281 aa4.19□□□□□ -1.74
VPS13B-207ENST00000518569 IGFBP2P18065 325 aa4.19□□□□□ -1.74
VPS13B-207ENST00000518569 CYP3A7P24462 503 aa4.19□□□□□ -1.74
VPS13B-207ENST00000518569 CERS1P27544 350 aa4.19□□□□□ -1.74
VPS13B-207ENST00000518569 CD38P28907 300 aa4.19□□□□□ -1.74
VPS13B-207ENST00000518569 MCM2P49736 904 aa4.19□□□□□ -1.74
VPS13B-207ENST00000518569 ARL4CP56559 192 aa4.19□□□□□ -1.74
VPS13B-207ENST00000518569 SLC14A1Q13336 389 aa4.19□□□□□ -1.74
VPS13B-207ENST00000518569 GAB1Q13480 694 aa4.19□□□□□ -1.74
VPS13B-207ENST00000518569 POSTNQ15063 836 aa4.19□□□□□ -1.74
VPS13B-207ENST00000518569 PFKFB3Q16875 520 aaPredicted RBP4.19□□□□□ -1.74
VPS13B-207ENST00000518569 GLE1Q53GS7 698 aaKnown RBP4.19□□□□□ -1.74
VPS13B-207ENST00000518569 KIAA1614Q5VZ46 1190 aa4.19□□□□□ -1.74
VPS13B-207ENST00000518569 SYCE2Q6PIF2 218 aa4.19□□□□□ -1.74
VPS13B-207ENST00000518569 KYAT3Q6YP21 454 aaKnown RBP4.19□□□□□ -1.74
VPS13B-207ENST00000518569 ZNF575Q86XF7 245 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms