RNA–Protein interactions for RNA: ENST00000518359.5

TMEM55A-202, humanhuman

TSL 3

Gene TMEM55A, Length 867 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55A-202ENST00000518359 ERVH48-1M5A8F1 160 aa12.26□□□□□ -0.45
TMEM55A-202ENST00000518359 VILLO15195 856 aa12.26□□□□□ -0.45
TMEM55A-202ENST00000518359 CLIC2O15247 247 aa12.26□□□□□ -0.45
TMEM55A-202ENST00000518359 TGFB1I1O43294 461 aa12.26□□□□□ -0.45
TMEM55A-202ENST00000518359 STX6O43752 255 aa12.26□□□□□ -0.45
TMEM55A-202ENST00000518359 KLKB1P03952 638 aa12.26□□□□□ -0.45
TMEM55A-202ENST00000518359 ITGAVP06756 1048 aa12.26□□□□□ -0.45
TMEM55A-202ENST00000518359 ADORA2BP29275 332 aa12.26□□□□□ -0.45
TMEM55A-202ENST00000518359 HOXD13P35453 343 aa12.26□□□□□ -0.45
TMEM55A-202ENST00000518359 ACTN2P35609 894 aa12.26□□□□□ -0.45
TMEM55A-202ENST00000518359 NDST1P52848 882 aa12.26□□□□□ -0.45
TMEM55A-202ENST00000518359 RACK1P63244 317 aaKnown RBP12.26□□□□□ -0.45
TMEM55A-202ENST00000518359 PDE4CQ08493 712 aa12.26□□□□□ -0.45
TMEM55A-202ENST00000518359 SFSWAPQ12872 951 aaKnown RBP12.26□□□□□ -0.45
TMEM55A-202ENST00000518359 TARDBPQ13148 414 aaKnown RBP eCLIP12.26□□□□□ -0.45
TMEM55A-202ENST00000518359 HES3Q5TGS1 186 aa12.26□□□□□ -0.45
TMEM55A-202ENST00000518359 CLEC20AQ6ZU45 233 aa12.26□□□□□ -0.45
TMEM55A-202ENST00000518359 CPXM2Q8N436 756 aa12.26□□□□□ -0.45
TMEM55A-202ENST00000518359 RBBP8NLQ8NC74 664 aaPredicted RBP12.26□□□□□ -0.45
TMEM55A-202ENST00000518359 ZNF507Q8TCN5 953 aa12.26□□□□□ -0.45
TMEM55A-202ENST00000518359 SORCS1Q8WY21 1168 aa12.26□□□□□ -0.45
TMEM55A-202ENST00000518359 FGF11Q92914 225 aa12.26□□□□□ -0.45
TMEM55A-202ENST00000518359 HPS3Q969F9 1004 aa12.26□□□□□ -0.45
TMEM55A-202ENST00000518359 TMEM176AQ96HP8 235 aa12.26□□□□□ -0.45
TMEM55A-202ENST00000518359 CLIC6Q96NY7 704 aa12.26□□□□□ -0.45
TMEM55A-202ENST00000518359 ELF4Q99607 663 aaPredicted RBP12.26□□□□□ -0.45
TMEM55A-202ENST00000518359 PANK2Q9BZ23 570 aa12.26□□□□□ -0.45
TMEM55A-202ENST00000518359 CLIC5Q9NZA1 410 aa12.26□□□□□ -0.45
TMEM55A-202ENST00000518359 CGNQ9P2M7 1197 aaKnown RBP12.26□□□□□ -0.45
TMEM55A-202ENST00000518359 STRIP2Q9ULQ0 834 aa12.26□□□□□ -0.45
TMEM55A-202ENST00000518359 NCKAP1Q9Y2A7 1128 aa12.26□□□□□ -0.45
TMEM55A-202ENST00000518359 COL6A6A6NMZ7 2263 aa12.26□□□□□ -0.45
TMEM55A-202ENST00000518359 EXOC3O60645 756 aa12.25□□□□□ -0.45
TMEM55A-202ENST00000518359 HMBSP08397 361 aa12.25□□□□□ -0.45
TMEM55A-202ENST00000518359 C7P10643 843 aa12.25□□□□□ -0.45
TMEM55A-202ENST00000518359 ARRB1P49407 418 aaPredicted RBP12.25□□□□□ -0.45
TMEM55A-202ENST00000518359 CXADRP78310 365 aa12.25□□□□□ -0.45
TMEM55A-202ENST00000518359 ASIC1P78348 528 aa12.25□□□□□ -0.45
TMEM55A-202ENST00000518359 AMPD3Q01432 767 aa12.25□□□□□ -0.45
TMEM55A-202ENST00000518359 EFEMP1Q12805 493 aa12.25□□□□□ -0.45
TMEM55A-202ENST00000518359 ILKQ13418 452 aa12.25□□□□□ -0.45
TMEM55A-202ENST00000518359 SGSM1Q2NKQ1 1148 aa12.25□□□□□ -0.45
TMEM55A-202ENST00000518359 TAF1BQ53T94 588 aaPredicted RBP12.25□□□□□ -0.45
TMEM55A-202ENST00000518359 FAM26FQ5R3K3 315 aa12.25□□□□□ -0.45
TMEM55A-202ENST00000518359 EPM2AIP1Q7L775 607 aaPredicted RBP12.25□□□□□ -0.45
TMEM55A-202ENST00000518359 CCDC186Q7Z3E2 898 aa12.25□□□□□ -0.45
TMEM55A-202ENST00000518359 GATAD2AQ86YP4 633 aa12.25□□□□□ -0.45
TMEM55A-202ENST00000518359 DENND1CQ8IV53 801 aa12.25□□□□□ -0.45
TMEM55A-202ENST00000518359 PDILTQ8N807 584 aa12.25□□□□□ -0.45
TMEM55A-202ENST00000518359 C12orf29Q8N999 325 aa12.25□□□□□ -0.45
TMEM55A-202ENST00000518359 WFIKKN2Q8TEU8 576 aa12.25□□□□□ -0.45
TMEM55A-202ENST00000518359 TAF4BQ92750 862 aa12.25□□□□□ -0.45
TMEM55A-202ENST00000518359 P2RY11Q96G91 374 aa12.25□□□□□ -0.45
TMEM55A-202ENST00000518359 HNRNPABQ99729 332 aaKnown RBP12.25□□□□□ -0.45
TMEM55A-202ENST00000518359 SDCBP2Q9H190 292 aa12.25□□□□□ -0.45
TMEM55A-202ENST00000518359 TMEM245Q9H330 911 aa12.25□□□□□ -0.45
TMEM55A-202ENST00000518359 AGO1Q9UL18 857 aaKnown RBP12.25□□□□□ -0.45
TMEM55A-202ENST00000518359 SCML1Q9UN30 329 aa12.25□□□□□ -0.45
TMEM55A-202ENST00000518359 VPS37CA5D8V6 355 aaPredicted RBP12.24□□□□□ -0.45
TMEM55A-202ENST00000518359 HHLA1C9JL84 531 aa12.24□□□□□ -0.45
TMEM55A-202ENST00000518359 BRINP1O60477 761 aa12.24□□□□□ -0.45
TMEM55A-202ENST00000518359 RPN1P04843 607 aaKnown RBP12.24□□□□□ -0.45
TMEM55A-202ENST00000518359 ACADVLP49748 655 aa12.24□□□□□ -0.45
TMEM55A-202ENST00000518359 KIF11P52732 1056 aa12.24□□□□□ -0.45
TMEM55A-202ENST00000518359 ZNF445P59923 1031 aa12.24□□□□□ -0.45
TMEM55A-202ENST00000518359 RPS14P62263 151 aaKnown RBP12.24□□□□□ -0.45
TMEM55A-202ENST00000518359 TLE3Q04726 772 aa12.24□□□□□ -0.45
TMEM55A-202ENST00000518359 CCDC173Q0VFZ6 552 aa12.24□□□□□ -0.45
TMEM55A-202ENST00000518359 DNAJC3Q13217 504 aa12.24□□□□□ -0.45
TMEM55A-202ENST00000518359 MPPE1Q53F39 396 aa12.24□□□□□ -0.45
TMEM55A-202ENST00000518359 KCNT1Q5JUK3 1230 aa12.24□□□□□ -0.45
TMEM55A-202ENST00000518359 TMEM215Q68D42 235 aa12.24□□□□□ -0.45
TMEM55A-202ENST00000518359 ZNF776Q68DI1 518 aaPredicted RBP12.24□□□□□ -0.45
TMEM55A-202ENST00000518359 KIAA0895LQ68EN5 471 aa12.24□□□□□ -0.45
TMEM55A-202ENST00000518359 FBXL19Q6PCT2 694 aa12.24□□□□□ -0.45
TMEM55A-202ENST00000518359 USP30Q70CQ3 517 aa12.24□□□□□ -0.45
TMEM55A-202ENST00000518359 RSRC2Q7L4I2 434 aaKnown RBP12.24□□□□□ -0.45
TMEM55A-202ENST00000518359 NELFCDQ8IXH7 590 aa12.24□□□□□ -0.45
TMEM55A-202ENST00000518359 C12orf56Q8IXR9 622 aa12.24□□□□□ -0.45
TMEM55A-202ENST00000518359 ARHGAP18Q8N392 663 aa12.24□□□□□ -0.45
TMEM55A-202ENST00000518359 CYFIP2Q96F07 1278 aa12.24□□□□□ -0.45
TMEM55A-202ENST00000518359 WBP1Q96G27 269 aa12.24□□□□□ -0.45
TMEM55A-202ENST00000518359 LGMNQ99538 433 aa12.24□□□□□ -0.45
TMEM55A-202ENST00000518359 GZF1Q9H116 711 aaPredicted RBP12.24□□□□□ -0.45
TMEM55A-202ENST00000518359 NYNRINQ9P2P1 1898 aaKnown RBP12.24□□□□□ -0.45
TMEM55A-202ENST00000518359 TFIP11Q9UBB9 837 aaKnown RBP12.24□□□□□ -0.45
TMEM55A-202ENST00000518359 HMGXB4Q9UGU5 601 aa12.24□□□□□ -0.45
TMEM55A-202ENST00000518359 A0A087X0B3 334 aa12.23□□□□□ -0.45
TMEM55A-202ENST00000518359 A0A1W2PPC4 97 aa12.23□□□□□ -0.45
TMEM55A-202ENST00000518359 CBX4O00257 560 aa12.23□□□□□ -0.45
TMEM55A-202ENST00000518359 KIF20AO95235 890 aa12.23□□□□□ -0.45
TMEM55A-202ENST00000518359 ATP5BP06576 529 aaKnown RBP12.23□□□□□ -0.45
TMEM55A-202ENST00000518359 NEFLP07196 543 aa12.23□□□□□ -0.45
TMEM55A-202ENST00000518359 CASP4P49662 377 aa12.23□□□□□ -0.45
TMEM55A-202ENST00000518359 UCNP55089 124 aa12.23□□□□□ -0.45
TMEM55A-202ENST00000518359 CLDN6P56747 220 aa12.23□□□□□ -0.45
TMEM55A-202ENST00000518359 RHDQ02161 417 aa12.23□□□□□ -0.45
TMEM55A-202ENST00000518359 CEBPZQ03701 1054 aaKnown RBP12.23□□□□□ -0.45
TMEM55A-202ENST00000518359 SLC45A4Q5BKX6 768 aa12.23□□□□□ -0.45
TMEM55A-202ENST00000518359 BROXQ5VW32 411 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms