RNA–Protein interactions for RNA: ENST00000517578.1

HMGB1P19-201, Transcript of high mobility group box 1 pseudogene 19, humanhuman

BASIC

Gene HMGB1P19, Length 577 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P19-201ENST00000517578 TNNI3KQ59H18 835 aa4.97□□□□□ -1.61
HMGB1P19-201ENST00000517578 CLVS2Q5SYC1 327 aa4.97□□□□□ -1.61
HMGB1P19-201ENST00000517578 AGAP7PQ5VUJ5 663 aa4.97□□□□□ -1.61
HMGB1P19-201ENST00000517578 TSHZ3Q63HK5 1081 aa4.97□□□□□ -1.61
HMGB1P19-201ENST00000517578 APOA5Q6Q788 366 aa4.97□□□□□ -1.61
HMGB1P19-201ENST00000517578 TMC5Q6UXY8 1006 aa4.97□□□□□ -1.61
HMGB1P19-201ENST00000517578 CENPUQ71F23 418 aa4.97□□□□□ -1.61
HMGB1P19-201ENST00000517578 MAEAQ7L5Y9 396 aa4.97□□□□□ -1.61
HMGB1P19-201ENST00000517578 TAS2R42Q7RTR8 314 aa4.97□□□□□ -1.61
HMGB1P19-201ENST00000517578 GSTA5Q7RTV2 222 aa4.97□□□□□ -1.61
HMGB1P19-201ENST00000517578 KCTD20Q7Z5Y7 419 aa4.97□□□□□ -1.61
HMGB1P19-201ENST00000517578 MRPL10Q7Z7H8 261 aaKnown RBP4.97□□□□□ -1.61
HMGB1P19-201ENST00000517578 C14orf80Q86SX3 495 aa4.97□□□□□ -1.61
HMGB1P19-201ENST00000517578 ADCK1Q86TW2 530 aa4.97□□□□□ -1.61
HMGB1P19-201ENST00000517578 SATL1Q86VE3 508 aa4.97□□□□□ -1.61
HMGB1P19-201ENST00000517578 ZNF410Q86VK4 478 aa4.97□□□□□ -1.61
HMGB1P19-201ENST00000517578 GPBP1Q86WP2 473 aa4.97□□□□□ -1.61
HMGB1P19-201ENST00000517578 CAMK1DQ8IU85 385 aa4.97□□□□□ -1.61
HMGB1P19-201ENST00000517578 TICAM1Q8IUC6 712 aa4.97□□□□□ -1.61
HMGB1P19-201ENST00000517578 PALM2Q8IXS6 379 aa4.97□□□□□ -1.61
HMGB1P19-201ENST00000517578 SLFN12Q8IYM2 578 aa4.97□□□□□ -1.61
HMGB1P19-201ENST00000517578 CLYBLQ8N0X4 340 aa4.97□□□□□ -1.61
HMGB1P19-201ENST00000517578 SIMC1Q8NDZ2 872 aa4.97□□□□□ -1.61
HMGB1P19-201ENST00000517578 APPL2Q8NEU8 664 aa4.97□□□□□ -1.61
HMGB1P19-201ENST00000517578 OR6Y1Q8NGX8 325 aa4.97□□□□□ -1.61
HMGB1P19-201ENST00000517578 TRAF3IP1Q8TDR0 691 aaPredicted RBP4.97□□□□□ -1.61
HMGB1P19-201ENST00000517578 OTUD7AQ8TE49 926 aaPredicted RBP4.97□□□□□ -1.61
HMGB1P19-201ENST00000517578 SEPT1Q8WYJ6 367 aa4.97□□□□□ -1.61
HMGB1P19-201ENST00000517578 HERVK_113Q902F9 699 aa4.97□□□□□ -1.61
HMGB1P19-201ENST00000517578 INTS12Q96CB8 462 aaKnown RBP4.97□□□□□ -1.61
HMGB1P19-201ENST00000517578 C11orf24Q96F05 449 aaPredicted RBP4.97□□□□□ -1.61
HMGB1P19-201ENST00000517578 CEP95Q96GE4 821 aa4.97□□□□□ -1.61
HMGB1P19-201ENST00000517578 SLC39A13Q96H72 371 aa4.97□□□□□ -1.61
HMGB1P19-201ENST00000517578 ZNF496Q96IT1 587 aaPredicted RBP4.97□□□□□ -1.61
HMGB1P19-201ENST00000517578 NSL1Q96IY1 281 aa4.97□□□□□ -1.61
HMGB1P19-201ENST00000517578 PAWRQ96IZ0 340 aaKnown RBP4.97□□□□□ -1.61
HMGB1P19-201ENST00000517578 ARL5BQ96KC2 179 aa4.97□□□□□ -1.61
HMGB1P19-201ENST00000517578 CEP170P1Q96L14 293 aa4.97□□□□□ -1.61
HMGB1P19-201ENST00000517578 C1orf74Q96LT6 269 aa4.97□□□□□ -1.61
HMGB1P19-201ENST00000517578 ZNF641Q96N77 438 aaPredicted RBP4.97□□□□□ -1.61
HMGB1P19-201ENST00000517578 MOGAT1Q96PD6 335 aa4.97□□□□□ -1.61
HMGB1P19-201ENST00000517578 RBM14Q96PK6 669 aaKnown RBP4.97□□□□□ -1.61
HMGB1P19-201ENST00000517578 SNX18Q96RF0 628 aa4.97□□□□□ -1.61
HMGB1P19-201ENST00000517578 KRT12Q99456 494 aa4.97□□□□□ -1.61
HMGB1P19-201ENST00000517578 C17orf80Q9BSJ5 609 aa4.97□□□□□ -1.61
HMGB1P19-201ENST00000517578 ACAT2Q9BWD1 397 aa4.97□□□□□ -1.61
HMGB1P19-201ENST00000517578 NT5C1AQ9BXI3 368 aa4.97□□□□□ -1.61
HMGB1P19-201ENST00000517578 CALN1Q9BXU9 219 aa4.97□□□□□ -1.61
HMGB1P19-201ENST00000517578 C6orf62Q9GZU0 229 aaPredicted RBP4.97□□□□□ -1.61
HMGB1P19-201ENST00000517578 PAIP1Q9H074 479 aaKnown RBP4.97□□□□□ -1.61
HMGB1P19-201ENST00000517578 RNF38Q9H0F5 515 aa4.97□□□□□ -1.61
HMGB1P19-201ENST00000517578 KCNN2Q9H2S1 579 aa4.97□□□□□ -1.61
HMGB1P19-201ENST00000517578 RMND5AQ9H871 391 aa4.97□□□□□ -1.61
HMGB1P19-201ENST00000517578 FANCEQ9HB96 536 aa4.97□□□□□ -1.61
HMGB1P19-201ENST00000517578 SYTL2Q9HCH5 934 aa4.97□□□□□ -1.61
HMGB1P19-201ENST00000517578 TRNAU1APQ9NX07 287 aaKnown RBP4.97□□□□□ -1.61
HMGB1P19-201ENST00000517578 TAS2R7Q9NYW3 318 aa4.97□□□□□ -1.61
HMGB1P19-201ENST00000517578 TAS2R1Q9NYW7 299 aa4.97□□□□□ -1.61
HMGB1P19-201ENST00000517578 CNOT8Q9UFF9 292 aaKnown RBP4.97□□□□□ -1.61
HMGB1P19-201ENST00000517578 FBXL5Q9UKA1 691 aa4.97□□□□□ -1.61
HMGB1P19-201ENST00000517578 CDH7Q9ULB5 785 aa4.97□□□□□ -1.61
HMGB1P19-201ENST00000517578 KCNH3Q9ULD8 1083 aa4.97□□□□□ -1.61
HMGB1P19-201ENST00000517578 PCDHA12Q9UN75 941 aa4.97□□□□□ -1.61
HMGB1P19-201ENST00000517578 PCDHA5Q9Y5H7 936 aa4.97□□□□□ -1.61
HMGB1P19-201ENST00000517578 MAD1L1Q9Y6D9 718 aa4.97□□□□□ -1.61
HMGB1P19-201ENST00000517578 SLC4A4Q9Y6R1 1079 aa4.97□□□□□ -1.61
HMGB1P19-201ENST00000517578 CC2D2AQ9P2K1 1620 aa4.97□□□□□ -1.61
HMGB1P19-201ENST00000517578 URB2Q14146 1524 aaKnown RBP4.97□□□□□ -1.61
HMGB1P19-201ENST00000517578 GPATCH8Q9UKJ3 1502 aaKnown RBP4.97□□□□□ -1.61
HMGB1P19-201ENST00000517578 RIMS2Q9UQ26 1411 aa4.97□□□□□ -1.61
HMGB1P19-201ENST00000517578 MAP3K19Q56UN5 1328 aa4.97□□□□□ -1.61
HMGB1P19-201ENST00000517578 ATP10BO94823 1461 aa4.96□□□□□ -1.62
HMGB1P19-201ENST00000517578 CARMIL3Q8ND23 1372 aa4.96□□□□□ -1.62
HMGB1P19-201ENST00000517578 A0A087WZG4 1122 aa4.96□□□□□ -1.62
HMGB1P19-201ENST00000517578 A0A1W2PRQ8 180 aa4.96□□□□□ -1.62
HMGB1P19-201ENST00000517578 BTBD18B2RXH4 712 aa4.96□□□□□ -1.62
HMGB1P19-201ENST00000517578 H0YJX3 145 aa4.96□□□□□ -1.62
HMGB1P19-201ENST00000517578 PLSCR1O15162 318 aa4.96□□□□□ -1.62
HMGB1P19-201ENST00000517578 MAGEB3O15480 346 aa4.96□□□□□ -1.62
HMGB1P19-201ENST00000517578 TBX10O75333 385 aa4.96□□□□□ -1.62
HMGB1P19-201ENST00000517578 ENTPD5O75356 428 aa4.96□□□□□ -1.62
HMGB1P19-201ENST00000517578 SULT1C4O75897 302 aa4.96□□□□□ -1.62
HMGB1P19-201ENST00000517578 HAUS5O94927 633 aa4.96□□□□□ -1.62
HMGB1P19-201ENST00000517578 RHOBTB3O94955 611 aa4.96□□□□□ -1.62
HMGB1P19-201ENST00000517578 ITGB1P05556 798 aa4.96□□□□□ -1.62
HMGB1P19-201ENST00000517578 KRT8P05787 483 aa4.96□□□□□ -1.62
HMGB1P19-201ENST00000517578 FAM153BP0C7A2 387 aa4.96□□□□□ -1.62
HMGB1P19-201ENST00000517578 SFTPCP11686 197 aa4.96□□□□□ -1.62
HMGB1P19-201ENST00000517578 CPA1P15085 419 aa4.96□□□□□ -1.62
HMGB1P19-201ENST00000517578 RAG1P15918 1043 aa4.96□□□□□ -1.62
HMGB1P19-201ENST00000517578 SYN1P17600 705 aa4.96□□□□□ -1.62
HMGB1P19-201ENST00000517578 CDH2P19022 906 aaPredicted RBP4.96□□□□□ -1.62
HMGB1P19-201ENST00000517578 ITIH1P19827 911 aa4.96□□□□□ -1.62
HMGB1P19-201ENST00000517578 EEF1GP26641 437 aaKnown RBP4.96□□□□□ -1.62
HMGB1P19-201ENST00000517578 MARCKSP29966 332 aaPredicted RBP4.96□□□□□ -1.62
HMGB1P19-201ENST00000517578 PRDX6P30041 224 aa4.96□□□□□ -1.62
HMGB1P19-201ENST00000517578 IGHMBP2P38935 993 aaKnown RBP4.96□□□□□ -1.62
HMGB1P19-201ENST00000517578 POLD2P49005 469 aa4.96□□□□□ -1.62
HMGB1P19-201ENST00000517578 FXR1P51114 621 aaKnown RBP eCLIP4.96□□□□□ -1.62
HMGB1P19-201ENST00000517578 SNX16P57768 344 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms