RNA–Protein interactions for RNA: ENST00000517239.1

RNU4-60P-201, Transcript of RNA, U4 small nuclear 60, pseudogene, humanhuman

BASIC

Gene RNU4-60P, Length 135 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-60P-201ENST00000517239 EIF3BP55884 814 aaKnown RBP4.17□□□□□ -1.74
RNU4-60P-201ENST00000517239 RTP1P59025 263 aa4.17□□□□□ -1.74
RNU4-60P-201ENST00000517239 CD83Q01151 205 aa4.17□□□□□ -1.74
RNU4-60P-201ENST00000517239 COX10Q12887 443 aa4.17□□□□□ -1.74
RNU4-60P-201ENST00000517239 RALGDSQ12967 914 aa4.17□□□□□ -1.74
RNU4-60P-201ENST00000517239 ITGA7Q13683 1181 aa4.17□□□□□ -1.74
RNU4-60P-201ENST00000517239 ZNF750Q32MQ0 723 aa4.17□□□□□ -1.74
RNU4-60P-201ENST00000517239 MAJINQ3KP22 176 aa4.17□□□□□ -1.74
RNU4-60P-201ENST00000517239 HSP90AA5PQ58FG0 334 aa4.17□□□□□ -1.74
RNU4-60P-201ENST00000517239 ZNF766Q5HY98 468 aa4.17□□□□□ -1.74
RNU4-60P-201ENST00000517239 LHX8Q68G74 356 aa4.17□□□□□ -1.74
RNU4-60P-201ENST00000517239 BICRALQ6AI39 1079 aa4.17□□□□□ -1.74
RNU4-60P-201ENST00000517239 WDR93Q6P2C0 686 aa4.17□□□□□ -1.74
RNU4-60P-201ENST00000517239 OGFOD3Q6PK18 319 aa4.17□□□□□ -1.74
RNU4-60P-201ENST00000517239 CCBE1Q6UXH8 406 aaPredicted RBP4.17□□□□□ -1.74
RNU4-60P-201ENST00000517239 ZNF574Q6ZN55 896 aaPredicted RBP4.17□□□□□ -1.74
RNU4-60P-201ENST00000517239 RGS9BPQ6ZS82 235 aa4.17□□□□□ -1.74
RNU4-60P-201ENST00000517239 PLEKHM3Q6ZWE6 761 aa4.17□□□□□ -1.74
RNU4-60P-201ENST00000517239 RALYLQ86SE5 291 aaKnown RBP4.17□□□□□ -1.74
RNU4-60P-201ENST00000517239 TRABD2AQ86V40 505 aa4.17□□□□□ -1.74
RNU4-60P-201ENST00000517239 MON1AQ86VX9 555 aa4.17□□□□□ -1.74
RNU4-60P-201ENST00000517239 PLXDC1Q8IUK5 500 aa4.17□□□□□ -1.74
RNU4-60P-201ENST00000517239 NEK11Q8NG66 645 aa4.17□□□□□ -1.74
RNU4-60P-201ENST00000517239 BRSK1Q8TDC3 778 aa4.17□□□□□ -1.74
RNU4-60P-201ENST00000517239 CASKIN2Q8WXE0 1202 aa4.17□□□□□ -1.74
RNU4-60P-201ENST00000517239 DDX17Q92841 729 aaKnown RBP4.17□□□□□ -1.74
RNU4-60P-201ENST00000517239 SMARCE1Q969G3 411 aa4.17□□□□□ -1.74
RNU4-60P-201ENST00000517239 SYTL4Q96C24 671 aaPredicted RBP4.17□□□□□ -1.74
RNU4-60P-201ENST00000517239 INTS12Q96CB8 462 aaKnown RBP4.17□□□□□ -1.74
RNU4-60P-201ENST00000517239 CHFRQ96EP1 664 aa4.17□□□□□ -1.74
RNU4-60P-201ENST00000517239 FAM227BQ96M60 508 aa4.17□□□□□ -1.74
RNU4-60P-201ENST00000517239 WDR92Q96MX6 357 aa4.17□□□□□ -1.74
RNU4-60P-201ENST00000517239 SPATA5L1Q9BVQ7 753 aa4.17□□□□□ -1.74
RNU4-60P-201ENST00000517239 CCDC106Q9BWC9 280 aa4.17□□□□□ -1.74
RNU4-60P-201ENST00000517239 CEP41Q9BYV8 373 aa4.17□□□□□ -1.74
RNU4-60P-201ENST00000517239 REXO4Q9GZR2 422 aaKnown RBP4.17□□□□□ -1.74
RNU4-60P-201ENST00000517239 HAPLN2Q9GZV7 340 aa4.17□□□□□ -1.74
RNU4-60P-201ENST00000517239 FAM83DQ9H4H8 585 aa4.17□□□□□ -1.74
RNU4-60P-201ENST00000517239 TASP1Q9H6P5 420 aa4.17□□□□□ -1.74
RNU4-60P-201ENST00000517239 LMCD1Q9NZU5 365 aa4.17□□□□□ -1.74
RNU4-60P-201ENST00000517239 SH3BP4Q9P0V3 963 aa4.17□□□□□ -1.74
RNU4-60P-201ENST00000517239 PIM2Q9P1W9 311 aa4.17□□□□□ -1.74
RNU4-60P-201ENST00000517239 SAE1Q9UBE0 346 aaPredicted RBP4.17□□□□□ -1.74
RNU4-60P-201ENST00000517239 RBPJLQ9UBG7 517 aa4.17□□□□□ -1.74
RNU4-60P-201ENST00000517239 SEC63Q9UGP8 760 aaKnown RBP4.17□□□□□ -1.74
RNU4-60P-201ENST00000517239 TUBE1Q9UJT0 475 aa4.17□□□□□ -1.74
RNU4-60P-201ENST00000517239 FAM184BQ9ULE4 1060 aa4.17□□□□□ -1.74
RNU4-60P-201ENST00000517239 NENFQ9UMX5 172 aa4.17□□□□□ -1.74
RNU4-60P-201ENST00000517239 ANGEL1Q9UNK9 670 aaKnown RBP4.17□□□□□ -1.74
RNU4-60P-201ENST00000517239 USP22Q9UPT9 525 aa4.17□□□□□ -1.74
RNU4-60P-201ENST00000517239 RCE1Q9Y256 329 aa4.17□□□□□ -1.74
RNU4-60P-201ENST00000517239 PCDHB7Q9Y5E2 793 aa4.17□□□□□ -1.74
RNU4-60P-201ENST00000517239 PCDHA5Q9Y5H7 936 aa4.17□□□□□ -1.74
RNU4-60P-201ENST00000517239 ATP8B3O60423 1300 aa4.17□□□□□ -1.74
RNU4-60P-201ENST00000517239 IGSF1Q8N6C5 1336 aa4.17□□□□□ -1.74
RNU4-60P-201ENST00000517239 TEX13CA0A0J9YWL9 993 aa4.16□□□□□ -1.74
RNU4-60P-201ENST00000517239 RNF103-CHMP3A0A140T963 221 aa4.16□□□□□ -1.74
RNU4-60P-201ENST00000517239 OR6C76A6NM76 312 aa4.16□□□□□ -1.74
RNU4-60P-201ENST00000517239 ZNF839A8K0R7 811 aa4.16□□□□□ -1.74
RNU4-60P-201ENST00000517239 RNF103O00237 685 aa4.16□□□□□ -1.74
RNU4-60P-201ENST00000517239 MCF2LO15068 1137 aa4.16□□□□□ -1.74
RNU4-60P-201ENST00000517239 TEX33O43247 280 aa4.16□□□□□ -1.74
RNU4-60P-201ENST00000517239 PEX11AO75192 247 aa4.16□□□□□ -1.74
RNU4-60P-201ENST00000517239 TADA2AO75478 443 aa4.16□□□□□ -1.74
RNU4-60P-201ENST00000517239 ITGA10O75578 1167 aa4.16□□□□□ -1.74
RNU4-60P-201ENST00000517239 CFIP05156 583 aa4.16□□□□□ -1.74
RNU4-60P-201ENST00000517239 RB1P06400 928 aa4.16□□□□□ -1.74
RNU4-60P-201ENST00000517239 RAP2AP10114 183 aa4.16□□□□□ -1.74
RNU4-60P-201ENST00000517239 PIM1P11309 404 aaPredicted RBP4.16□□□□□ -1.74
RNU4-60P-201ENST00000517239 SFTPCP11686 197 aa4.16□□□□□ -1.74
RNU4-60P-201ENST00000517239 CHN1P15882 459 aa4.16□□□□□ -1.74
RNU4-60P-201ENST00000517239 CRHR1P34998 444 aa4.16□□□□□ -1.74
RNU4-60P-201ENST00000517239 IL15P40933 162 aaPredicted RBP4.16□□□□□ -1.74
RNU4-60P-201ENST00000517239 PRKCIP41743 596 aa4.16□□□□□ -1.74
RNU4-60P-201ENST00000517239 SLC15A1P46059 708 aa4.16□□□□□ -1.74
RNU4-60P-201ENST00000517239 CCR10P46092 362 aa4.16□□□□□ -1.74
RNU4-60P-201ENST00000517239 ALDH1A3P47895 512 aa4.16□□□□□ -1.74
RNU4-60P-201ENST00000517239 LUMP51884 338 aaPredicted RBP4.16□□□□□ -1.74
RNU4-60P-201ENST00000517239 EPHB3P54753 998 aa4.16□□□□□ -1.74
RNU4-60P-201ENST00000517239 WNT3P56703 355 aa4.16□□□□□ -1.74
RNU4-60P-201ENST00000517239 STARD6P59095 220 aa4.16□□□□□ -1.74
RNU4-60P-201ENST00000517239 OLR1P78380 273 aa4.16□□□□□ -1.74
RNU4-60P-201ENST00000517239 SGCGQ13326 291 aa4.16□□□□□ -1.74
RNU4-60P-201ENST00000517239 SNTB1Q13884 538 aaKnown RBP4.16□□□□□ -1.74
RNU4-60P-201ENST00000517239 KIR3DS1Q14943 382 aa4.16□□□□□ -1.74
RNU4-60P-201ENST00000517239 NKPD1Q17RQ9 610 aa4.16□□□□□ -1.74
RNU4-60P-201ENST00000517239 SHROOM1Q2M3G4 852 aaPredicted RBP4.16□□□□□ -1.74
RNU4-60P-201ENST00000517239 LETM2Q2VYF4 491 aa4.16□□□□□ -1.74
RNU4-60P-201ENST00000517239 TBRG1Q3YBR2 411 aa4.16□□□□□ -1.74
RNU4-60P-201ENST00000517239 CYP27C1Q4G0S4 372 aa4.16□□□□□ -1.74
RNU4-60P-201ENST00000517239 CEP55Q53EZ4 464 aa4.16□□□□□ -1.74
RNU4-60P-201ENST00000517239 ZRANB3Q5FWF4 1079 aa4.16□□□□□ -1.74
RNU4-60P-201ENST00000517239 COLEC12Q5KU26 742 aa4.16□□□□□ -1.74
RNU4-60P-201ENST00000517239 RNFT1Q5M7Z0 435 aa4.16□□□□□ -1.74
RNU4-60P-201ENST00000517239 SPDYAQ5MJ70 313 aa4.16□□□□□ -1.74
RNU4-60P-201ENST00000517239 CCDC183Q5T5S1 534 aa4.16□□□□□ -1.74
RNU4-60P-201ENST00000517239 GKAP1Q5VSY0 366 aaPredicted RBP4.16□□□□□ -1.74
RNU4-60P-201ENST00000517239 KLHL10Q6JEL2 608 aa4.16□□□□□ -1.74
RNU4-60P-201ENST00000517239 CDC73Q6P1J9 531 aa4.16□□□□□ -1.74
RNU4-60P-201ENST00000517239 C16orf87Q6PH81 154 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms