RNA–Protein interactions for RNA: ENST00000516173.1

RN7SKP43-201, Transcript of RNA, 7SK small nuclear pseudogene 43, humanhuman

BASIC

Gene RN7SKP43, Length 320 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP43-201ENST00000516173 RAD23BP54727 409 aa3.16□□□□□ -1.9
RN7SKP43-201ENST00000516173 NLRP11P59045 1033 aaKnown RBP3.16□□□□□ -1.9
RN7SKP43-201ENST00000516173 EIF3EP60228 445 aaKnown RBP3.16□□□□□ -1.9
RN7SKP43-201ENST00000516173 PSMC1P62191 440 aaKnown RBP3.16□□□□□ -1.9
RN7SKP43-201ENST00000516173 RPL7AP62424 266 aaKnown RBP3.16□□□□□ -1.9
RN7SKP43-201ENST00000516173 GPLD1P80108 840 aa3.16□□□□□ -1.9
RN7SKP43-201ENST00000516173 MRPS35P82673 323 aaKnown RBP3.16□□□□□ -1.9
RN7SKP43-201ENST00000516173 RBP5P82980 135 aa3.16□□□□□ -1.9
RN7SKP43-201ENST00000516173 OCRLQ01968 901 aa3.16□□□□□ -1.9
RN7SKP43-201ENST00000516173 SLC25A11Q02978 314 aaKnown RBP3.16□□□□□ -1.9
RN7SKP43-201ENST00000516173 MLLT1Q03111 559 aaPredicted RBP3.16□□□□□ -1.9
RN7SKP43-201ENST00000516173 INCA1Q0VD86 236 aa3.16□□□□□ -1.9
RN7SKP43-201ENST00000516173 LAMTOR4Q0VGL1 99 aa3.16□□□□□ -1.9
RN7SKP43-201ENST00000516173 CAPSQ13938 189 aa3.16□□□□□ -1.9
RN7SKP43-201ENST00000516173 CCINQ13939 588 aa3.16□□□□□ -1.9
RN7SKP43-201ENST00000516173 MPP2Q14168 576 aa3.16□□□□□ -1.9
RN7SKP43-201ENST00000516173 FRG1Q14331 258 aaKnown RBP3.16□□□□□ -1.9
RN7SKP43-201ENST00000516173 NOMO1Q15155 1222 aa3.16□□□□□ -1.9
RN7SKP43-201ENST00000516173 TPSAB1Q15661 275 aa3.16□□□□□ -1.9
RN7SKP43-201ENST00000516173 ZKSCAN8Q15776 578 aaPredicted RBP3.16□□□□□ -1.9
RN7SKP43-201ENST00000516173 PKN2Q16513 984 aaKnown RBP3.16□□□□□ -1.9
RN7SKP43-201ENST00000516173 TSNAXIP1Q2TAA8 658 aa3.16□□□□□ -1.9
RN7SKP43-201ENST00000516173 ZNF699Q32M78 642 aa3.16□□□□□ -1.9
RN7SKP43-201ENST00000516173 FAM133BQ5BKY9 247 aaKnown RBP3.16□□□□□ -1.9
RN7SKP43-201ENST00000516173 CELF3Q5SZQ8 465 aaKnown RBP3.16□□□□□ -1.9
RN7SKP43-201ENST00000516173 C6orf163Q5TEZ5 329 aa3.16□□□□□ -1.9
RN7SKP43-201ENST00000516173 ATF7IP2Q5U623 682 aa3.16□□□□□ -1.9
RN7SKP43-201ENST00000516173 ANGEL2Q5VTE6 544 aaKnown RBP3.16□□□□□ -1.9
RN7SKP43-201ENST00000516173 METTL21CQ5VZV1 264 aa3.16□□□□□ -1.9
RN7SKP43-201ENST00000516173 AAGABQ6PD74 315 aa3.16□□□□□ -1.9
RN7SKP43-201ENST00000516173 LVRNQ6Q4G3 990 aa3.16□□□□□ -1.9
RN7SKP43-201ENST00000516173 KYAT3Q6YP21 454 aaKnown RBP3.16□□□□□ -1.9
RN7SKP43-201ENST00000516173 SH2D5Q6ZV89 423 aa3.16□□□□□ -1.9
RN7SKP43-201ENST00000516173 PDZD4Q76G19 769 aaPredicted RBP3.16□□□□□ -1.9
RN7SKP43-201ENST00000516173 FASTKD5Q7L8L6 764 aaKnown RBP3.16□□□□□ -1.9
RN7SKP43-201ENST00000516173 DPH6Q7L8W6 267 aa3.16□□□□□ -1.9
RN7SKP43-201ENST00000516173 CLNKQ7Z7G1 428 aa3.16□□□□□ -1.9
RN7SKP43-201ENST00000516173 ADGRG6Q86SQ4 1221 aa3.16□□□□□ -1.9
RN7SKP43-201ENST00000516173 TMEM110Q86TL2 294 aa3.16□□□□□ -1.9
RN7SKP43-201ENST00000516173 GGNQ86UU5 652 aa3.16□□□□□ -1.9
RN7SKP43-201ENST00000516173 ECHDC2Q86YB7 292 aa3.16□□□□□ -1.9
RN7SKP43-201ENST00000516173 PASD1Q8IV76 773 aa3.16□□□□□ -1.9
RN7SKP43-201ENST00000516173 LMNTD2Q8IXW0 634 aa3.16□□□□□ -1.9
RN7SKP43-201ENST00000516173 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP3.16□□□□□ -1.9
RN7SKP43-201ENST00000516173 KIRREL3Q8IZU9 778 aa3.16□□□□□ -1.9
RN7SKP43-201ENST00000516173 ZNF276Q8N554 614 aa3.16□□□□□ -1.9
RN7SKP43-201ENST00000516173 PPFIBP2Q8ND30 876 aa3.16□□□□□ -1.9
RN7SKP43-201ENST00000516173 SMC1BQ8NDV3 1235 aa3.16□□□□□ -1.9
RN7SKP43-201ENST00000516173 ZSWIM2Q8NEG5 633 aa3.16□□□□□ -1.9
RN7SKP43-201ENST00000516173 SHCBP1Q8NEM2 672 aa3.16□□□□□ -1.9
RN7SKP43-201ENST00000516173 OR5B17Q8NGF7 314 aa3.16□□□□□ -1.9
RN7SKP43-201ENST00000516173 PIP4K2CQ8TBX8 421 aa3.16□□□□□ -1.9
RN7SKP43-201ENST00000516173 ACTL9Q8TC94 416 aa3.16□□□□□ -1.9
RN7SKP43-201ENST00000516173 NSMCE1Q8WV22 266 aa3.16□□□□□ -1.9
RN7SKP43-201ENST00000516173 SLC44A1Q8WWI5 657 aa3.16□□□□□ -1.9
RN7SKP43-201ENST00000516173 CPT1BQ92523 772 aa3.16□□□□□ -1.9
RN7SKP43-201ENST00000516173 ATP2A3Q93084 1043 aa3.16□□□□□ -1.9
RN7SKP43-201ENST00000516173 TTC17Q96AE7 1141 aa3.16□□□□□ -1.9
RN7SKP43-201ENST00000516173 TMEM143Q96AN5 459 aa3.16□□□□□ -1.9
RN7SKP43-201ENST00000516173 MIEF2Q96C03 454 aa3.16□□□□□ -1.9
RN7SKP43-201ENST00000516173 ATG4CQ96DT6 458 aa3.16□□□□□ -1.9
RN7SKP43-201ENST00000516173 NAF1Q96HR8 494 aaKnown RBP3.16□□□□□ -1.9
RN7SKP43-201ENST00000516173 C20orf173Q96LM9 149 aa3.16□□□□□ -1.9
RN7SKP43-201ENST00000516173 C9orf72Q96LT7 481 aa3.16□□□□□ -1.9
RN7SKP43-201ENST00000516173 C7orf26Q96N11 449 aa3.16□□□□□ -1.9
RN7SKP43-201ENST00000516173 RNF157Q96PX1 679 aa3.16□□□□□ -1.9
RN7SKP43-201ENST00000516173 SLC9A7Q96T83 725 aa3.16□□□□□ -1.9
RN7SKP43-201ENST00000516173 ZNF670Q9BS34 389 aa3.16□□□□□ -1.9
RN7SKP43-201ENST00000516173 TMEM121Q9BTD3 319 aa3.16□□□□□ -1.9
RN7SKP43-201ENST00000516173 PI4K2AQ9BTU6 479 aa3.16□□□□□ -1.9
RN7SKP43-201ENST00000516173 HEMGNQ9BXL5 484 aa3.16□□□□□ -1.9
RN7SKP43-201ENST00000516173 INO80BQ9C086 356 aaPredicted RBP3.16□□□□□ -1.9
RN7SKP43-201ENST00000516173 IQCGQ9H095 443 aaKnown RBP3.16□□□□□ -1.9
RN7SKP43-201ENST00000516173 KLC2Q9H0B6 622 aa3.16□□□□□ -1.9
RN7SKP43-201ENST00000516173 BRD8Q9H0E9 1235 aa3.16□□□□□ -1.9
RN7SKP43-201ENST00000516173 XYLT2Q9H1B5 865 aa3.16□□□□□ -1.9
RN7SKP43-201ENST00000516173 VCXQ9H320 206 aa3.16□□□□□ -1.9
RN7SKP43-201ENST00000516173 SYNCQ9H7C4 482 aa3.16□□□□□ -1.9
RN7SKP43-201ENST00000516173 RNPEPL1Q9HAU8 725 aa3.16□□□□□ -1.9
RN7SKP43-201ENST00000516173 APOBEC3GQ9HC16 384 aaKnown RBP3.16□□□□□ -1.9
RN7SKP43-201ENST00000516173 ACP6Q9NPH0 428 aa3.16□□□□□ -1.9
RN7SKP43-201ENST00000516173 EIF2B3Q9NR50 452 aaKnown RBP3.16□□□□□ -1.9
RN7SKP43-201ENST00000516173 ZNF277Q9NRM2 450 aaPredicted RBP3.16□□□□□ -1.9
RN7SKP43-201ENST00000516173 HOMER2Q9NSB8 354 aa3.16□□□□□ -1.9
RN7SKP43-201ENST00000516173 SPATS2LQ9NUQ6 558 aaKnown RBP3.16□□□□□ -1.9
RN7SKP43-201ENST00000516173 ABCF3Q9NUQ8 709 aa3.16□□□□□ -1.9
RN7SKP43-201ENST00000516173 ERAP1Q9NZ08 941 aa3.16□□□□□ -1.9
RN7SKP43-201ENST00000516173 CNTN3Q9P232 1028 aa3.16□□□□□ -1.9
RN7SKP43-201ENST00000516173 PPP1R1BQ9UD71 204 aaPredicted RBP3.16□□□□□ -1.9
RN7SKP43-201ENST00000516173 ZNF212Q9UDV6 495 aa3.16□□□□□ -1.9
RN7SKP43-201ENST00000516173 TBK1Q9UHD2 729 aa3.16□□□□□ -1.9
RN7SKP43-201ENST00000516173 BCAP29Q9UHQ4 241 aa3.16□□□□□ -1.9
RN7SKP43-201ENST00000516173 XPO7Q9UIA9 1087 aaKnown RBP3.16□□□□□ -1.9
RN7SKP43-201ENST00000516173 HACL1Q9UJ83 578 aa3.16□□□□□ -1.9
RN7SKP43-201ENST00000516173 GRID1Q9ULK0 1009 aa3.16□□□□□ -1.9
RN7SKP43-201ENST00000516173 CORO1CQ9ULV4 474 aaPredicted RBP3.16□□□□□ -1.9
RN7SKP43-201ENST00000516173 BARX2Q9UMQ3 279 aaPredicted RBP3.16□□□□□ -1.9
RN7SKP43-201ENST00000516173 USP18Q9UMW8 372 aa3.16□□□□□ -1.9
RN7SKP43-201ENST00000516173 WDR3Q9UNX4 943 aaKnown RBP eCLIP3.16□□□□□ -1.9
RN7SKP43-201ENST00000516173 USTQ9Y2C2 406 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms