RNA–Protein interactions for RNA: ENST00000516133.1

SCARNA16.1-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 183 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.1-201ENST00000516133 POLMQ9NP87 494 aaPredicted RBP11.66□□□□□ -0.54
SCARNA16.1-201ENST00000516133 POLR3BQ9NW08 1133 aaPredicted RBP11.66□□□□□ -0.54
SCARNA16.1-201ENST00000516133 TMEM51Q9NW97 253 aa11.66□□□□□ -0.54
SCARNA16.1-201ENST00000516133 SLC12A6Q9UHW9 1150 aa11.66□□□□□ -0.54
SCARNA16.1-201ENST00000516133 SMG5Q9UPR3 1016 aaKnown RBP11.66□□□□□ -0.54
SCARNA16.1-201ENST00000516133 SIK3Q9Y2K2 1263 aa11.66□□□□□ -0.54
SCARNA16.1-201ENST00000516133 CEP250Q9BV73 2442 aa11.66□□□□□ -0.54
SCARNA16.1-201ENST00000516133 PRRT4C9JH25 899 aa11.65□□□□□ -0.54
SCARNA16.1-201ENST00000516133 SGK1O00141 431 aa11.65□□□□□ -0.54
SCARNA16.1-201ENST00000516133 GFRA2O00451 464 aa11.65□□□□□ -0.54
SCARNA16.1-201ENST00000516133 ZBTB24O43167 697 aaPredicted RBP11.65□□□□□ -0.54
SCARNA16.1-201ENST00000516133 ACSL4O60488 711 aa11.65□□□□□ -0.54
SCARNA16.1-201ENST00000516133 RPP40O75818 363 aaKnown RBP11.65□□□□□ -0.54
SCARNA16.1-201ENST00000516133 CAVIN2O95810 425 aa11.65□□□□□ -0.54
SCARNA16.1-201ENST00000516133 TRUB2O95900 331 aaKnown RBP11.65□□□□□ -0.54
SCARNA16.1-201ENST00000516133 CHRM1P11229 460 aaPredicted RBP11.65□□□□□ -0.54
SCARNA16.1-201ENST00000516133 NTSR1P30989 418 aa11.65□□□□□ -0.54
SCARNA16.1-201ENST00000516133 GBP1P32455 592 aa11.65□□□□□ -0.54
SCARNA16.1-201ENST00000516133 SOX5P35711 763 aa11.65□□□□□ -0.54
SCARNA16.1-201ENST00000516133 KLK7P49862 253 aa11.65□□□□□ -0.54
SCARNA16.1-201ENST00000516133 SLC6A3Q01959 620 aa11.65□□□□□ -0.54
SCARNA16.1-201ENST00000516133 MTA1Q13330 715 aa11.65□□□□□ -0.54
SCARNA16.1-201ENST00000516133 TAF5Q15542 800 aa11.65□□□□□ -0.54
SCARNA16.1-201ENST00000516133 SKOR2Q2VWA4 1001 aaPredicted RBP11.65□□□□□ -0.54
SCARNA16.1-201ENST00000516133 FILIP1LQ4L180 1135 aa11.65□□□□□ -0.54
SCARNA16.1-201ENST00000516133 USP39Q53GS9 565 aaKnown RBP11.65□□□□□ -0.54
SCARNA16.1-201ENST00000516133 LAIR1Q6GTX8 287 aa11.65□□□□□ -0.54
SCARNA16.1-201ENST00000516133 OR6B2Q6IFH4 312 aa11.65□□□□□ -0.54
SCARNA16.1-201ENST00000516133 PRR23BQ6ZRT6 265 aa11.65□□□□□ -0.54
SCARNA16.1-201ENST00000516133 SLC26A9Q7LBE3 791 aa11.65□□□□□ -0.54
SCARNA16.1-201ENST00000516133 APTXQ7Z2E3 356 aaKnown RBP11.65□□□□□ -0.54
SCARNA16.1-201ENST00000516133 CACNA2D4Q7Z3S7 1137 aa11.65□□□□□ -0.54
SCARNA16.1-201ENST00000516133 NOP9Q86U38 636 aaKnown RBP11.65□□□□□ -0.54
SCARNA16.1-201ENST00000516133 ERICH1Q86X53 443 aa11.65□□□□□ -0.54
SCARNA16.1-201ENST00000516133 CHPFQ8IZ52 775 aa11.65□□□□□ -0.54
SCARNA16.1-201ENST00000516133 GPR161Q8N6U8 529 aaKnown RBP11.65□□□□□ -0.54
SCARNA16.1-201ENST00000516133 ZNF557Q8N988 423 aaPredicted RBP11.65□□□□□ -0.54
SCARNA16.1-201ENST00000516133 MSANTD4Q8NCY6 345 aa11.65□□□□□ -0.54
SCARNA16.1-201ENST00000516133 EPS8L1Q8TE68 723 aa11.65□□□□□ -0.54
SCARNA16.1-201ENST00000516133 UCMAQ8WVF2 138 aa11.65□□□□□ -0.54
SCARNA16.1-201ENST00000516133 DDX1Q92499 740 aaKnown RBP11.65□□□□□ -0.54
SCARNA16.1-201ENST00000516133 C18orf8Q96DM3 657 aa11.65□□□□□ -0.54
SCARNA16.1-201ENST00000516133 SLC39A13Q96H72 371 aa11.65□□□□□ -0.54
SCARNA16.1-201ENST00000516133 FCRL2Q96LA5 508 aaPredicted RBP11.65□□□□□ -0.54
SCARNA16.1-201ENST00000516133 SLC2A13Q96QE2 648 aa11.65□□□□□ -0.54
SCARNA16.1-201ENST00000516133 NLRC4Q9NPP4 1024 aa11.65□□□□□ -0.54
SCARNA16.1-201ENST00000516133 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.65□□□□□ -0.54
SCARNA16.1-201ENST00000516133 NCDNQ9UBB6 729 aa11.65□□□□□ -0.54
SCARNA16.1-201ENST00000516133 TYW5A2RUC4 315 aaKnown RBP11.64□□□□□ -0.55
SCARNA16.1-201ENST00000516133 ANTXRLA6NF34 631 aa11.64□□□□□ -0.55
SCARNA16.1-201ENST00000516133 TSPAN3O60637 253 aa11.64□□□□□ -0.55
SCARNA16.1-201ENST00000516133 ADAM23O75077 832 aa11.64□□□□□ -0.55
SCARNA16.1-201ENST00000516133 GFPT2O94808 682 aa11.64□□□□□ -0.55
SCARNA16.1-201ENST00000516133 IGLV3-25P01717 112 aa11.64□□□□□ -0.55
SCARNA16.1-201ENST00000516133 APOEP02649 317 aa11.64□□□□□ -0.55
SCARNA16.1-201ENST00000516133 ERBB2P04626 1255 aa11.64□□□□□ -0.55
SCARNA16.1-201ENST00000516133 RETP07949 1114 aa11.64□□□□□ -0.55
SCARNA16.1-201ENST00000516133 ATP1A3P13637 1013 aa11.64□□□□□ -0.55
SCARNA16.1-201ENST00000516133 HNRNPLP14866 589 aaKnown RBP eCLIP11.64□□□□□ -0.55
SCARNA16.1-201ENST00000516133 HOXC13P31276 330 aa11.64□□□□□ -0.55
SCARNA16.1-201ENST00000516133 NOS2P35228 1153 aa11.64□□□□□ -0.55
SCARNA16.1-201ENST00000516133 SCNN1AP37088 669 aa11.64□□□□□ -0.55
SCARNA16.1-201ENST00000516133 GABRB2P47870 512 aa11.64□□□□□ -0.55
SCARNA16.1-201ENST00000516133 JAM2P57087 298 aa11.64□□□□□ -0.55
SCARNA16.1-201ENST00000516133 CDR2Q01850 454 aa11.64□□□□□ -0.55
SCARNA16.1-201ENST00000516133 EIF4HQ15056 248 aaKnown RBP11.64□□□□□ -0.55
SCARNA16.1-201ENST00000516133 PTPN20Q4JDL3 420 aa11.64□□□□□ -0.55
SCARNA16.1-201ENST00000516133 PIK3R6Q5UE93 754 aa11.64□□□□□ -0.55
SCARNA16.1-201ENST00000516133 TAF3Q5VWG9 929 aa11.64□□□□□ -0.55
SCARNA16.1-201ENST00000516133 ANO7Q6IWH7 933 aa11.64□□□□□ -0.55
SCARNA16.1-201ENST00000516133 OLFML1Q6UWY5 402 aa11.64□□□□□ -0.55
SCARNA16.1-201ENST00000516133 TMEM92Q6UXU6 159 aa11.64□□□□□ -0.55
SCARNA16.1-201ENST00000516133 FAM183BPQ6ZVS7 135 aa11.64□□□□□ -0.55
SCARNA16.1-201ENST00000516133 ANKS1BQ7Z6G8 1248 aa11.64□□□□□ -0.55
SCARNA16.1-201ENST00000516133 TAC4Q86UU9 113 aa11.64□□□□□ -0.55
SCARNA16.1-201ENST00000516133 C11orf74Q86VG3 221 aa11.64□□□□□ -0.55
SCARNA16.1-201ENST00000516133 RASSF3Q86WH2 238 aa11.64□□□□□ -0.55
SCARNA16.1-201ENST00000516133 DHX40Q8IX18 779 aaKnown RBP11.64□□□□□ -0.55
SCARNA16.1-201ENST00000516133 DEFB106AQ8N104 65 aa11.64□□□□□ -0.55
SCARNA16.1-201ENST00000516133 ZNF397Q8NF99 534 aaPredicted RBP11.64□□□□□ -0.55
SCARNA16.1-201ENST00000516133 ADAM32Q8TC27 787 aa11.64□□□□□ -0.55
SCARNA16.1-201ENST00000516133 P2RY11Q96G91 374 aa11.64□□□□□ -0.55
SCARNA16.1-201ENST00000516133 PIWIL1Q96J94 861 aaKnown RBP11.64□□□□□ -0.55
SCARNA16.1-201ENST00000516133 BTN2A3PQ96KV6 586 aa11.64□□□□□ -0.55
SCARNA16.1-201ENST00000516133 ELOVL2Q9NXB9 296 aa11.64□□□□□ -0.55
SCARNA16.1-201ENST00000516133 RRN3Q9NYV6 651 aa11.64□□□□□ -0.55
SCARNA16.1-201ENST00000516133 TJP2Q9UDY2 1190 aa11.64□□□□□ -0.55
SCARNA16.1-201ENST00000516133 GMEB2Q9UKD1 530 aa11.64□□□□□ -0.55
SCARNA16.1-201ENST00000516133 SYCE3A1L190 88 aa11.63□□□□□ -0.55
SCARNA16.1-201ENST00000516133 EPHB6O15197 1021 aa11.63□□□□□ -0.55
SCARNA16.1-201ENST00000516133 MMEP08473 750 aa11.63□□□□□ -0.55
SCARNA16.1-201ENST00000516133 CCDC172P0C7W6 258 aa11.63□□□□□ -0.55
SCARNA16.1-201ENST00000516133 ABCB4P21439 1286 aa11.63□□□□□ -0.55
SCARNA16.1-201ENST00000516133 HOXD9P28356 352 aaPredicted RBP11.63□□□□□ -0.55
SCARNA16.1-201ENST00000516133 CCR1P32246 355 aa11.63□□□□□ -0.55
SCARNA16.1-201ENST00000516133 MATKP42679 507 aa11.63□□□□□ -0.55
SCARNA16.1-201ENST00000516133 TPM4P67936 248 aa11.63□□□□□ -0.55
SCARNA16.1-201ENST00000516133 SRSF5Q13243 272 aaKnown RBP11.63□□□□□ -0.55
SCARNA16.1-201ENST00000516133 EIF4EBP2Q13542 120 aaPredicted RBP11.63□□□□□ -0.55
SCARNA16.1-201ENST00000516133 BYSLQ13895 437 aaKnown RBP11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms