RNA–Protein interactions for RNA: ENST00000515737.5

SH3BP2-228, Transcript of SH3 domain binding protein 2, humanhuman

TSL 2

Gene SH3BP2, Length 2,579 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3BP2-228ENST00000515737 VN1R3Q9BXE9 311 aa17.48■□□□□ 0.39
SH3BP2-228ENST00000515737 FOXP3Q9BZS1 431 aa17.48■□□□□ 0.39
SH3BP2-228ENST00000515737 ADAM21Q9UKJ8 722 aa17.48■□□□□ 0.39
SH3BP2-228ENST00000515737 FARP1Q9Y4F1 1045 aaPredicted RBP17.48■□□□□ 0.39
SH3BP2-228ENST00000515737 CFAP69A5D8W1 941 aa17.48■□□□□ 0.39
SH3BP2-228ENST00000515737 NDC80O14777 642 aa17.48■□□□□ 0.39
SH3BP2-228ENST00000515737 VNN2O95498 520 aa17.48■□□□□ 0.39
SH3BP2-228ENST00000515737 ACRP10323 421 aa17.48■□□□□ 0.39
SH3BP2-228ENST00000515737 SEMA3BQ13214 749 aa17.48■□□□□ 0.39
SH3BP2-228ENST00000515737 XRCC4Q13426 336 aa17.48■□□□□ 0.39
SH3BP2-228ENST00000515737 CPT1BQ92523 772 aa17.48■□□□□ 0.39
SH3BP2-228ENST00000515737 CASP10Q92851 521 aa17.48■□□□□ 0.39
SH3BP2-228ENST00000515737 TMEM106CQ9BVX2 250 aa17.48■□□□□ 0.39
SH3BP2-228ENST00000515737 OXCT2Q9BYC2 517 aaPredicted RBP17.48■□□□□ 0.39
SH3BP2-228ENST00000515737 PRDM16Q9HAZ2 1276 aa17.48■□□□□ 0.39
SH3BP2-228ENST00000515737 OSER1Q9NX31 292 aa17.48■□□□□ 0.39
SH3BP2-228ENST00000515737 OR12D3Q9UGF7 316 aa17.48■□□□□ 0.39
SH3BP2-228ENST00000515737 SHOC2Q9UQ13 582 aa17.48■□□□□ 0.39
SH3BP2-228ENST00000515737 LTBP2Q14767 1821 aa17.48■□□□□ 0.39
SH3BP2-228ENST00000515737 KIAA0355O15063 1070 aa17.47■□□□□ 0.39
SH3BP2-228ENST00000515737 ADAM12O43184 909 aa17.47■□□□□ 0.39
SH3BP2-228ENST00000515737 IRAK2O43187 625 aa17.47■□□□□ 0.39
SH3BP2-228ENST00000515737 ACSL3O95573 720 aa17.47■□□□□ 0.39
SH3BP2-228ENST00000515737 EFEMP2O95967 443 aa17.47■□□□□ 0.39
SH3BP2-228ENST00000515737 EIF4EBP2Q13542 120 aaPredicted RBP17.47■□□□□ 0.39
SH3BP2-228ENST00000515737 DPYSQ14117 519 aa17.47■□□□□ 0.39
SH3BP2-228ENST00000515737 KYNUQ16719 465 aa17.47■□□□□ 0.39
SH3BP2-228ENST00000515737 MFSD5Q6N075 450 aa17.47■□□□□ 0.39
SH3BP2-228ENST00000515737 KIAA1841Q6NSI8 718 aa17.47■□□□□ 0.39
SH3BP2-228ENST00000515737 PPIL6Q8IXY8 311 aa17.47■□□□□ 0.39
SH3BP2-228ENST00000515737 PRCCQ92733 491 aaPredicted RBP17.47■□□□□ 0.39
SH3BP2-228ENST00000515737 ZNF689Q96CS4 500 aaPredicted RBP17.47■□□□□ 0.39
SH3BP2-228ENST00000515737 SMOC2Q9H3U7 446 aa17.47■□□□□ 0.39
SH3BP2-228ENST00000515737 TMBIM4Q9HC24 238 aa17.47■□□□□ 0.39
SH3BP2-228ENST00000515737 LRRC4CQ9HCJ2 640 aa17.47■□□□□ 0.39
SH3BP2-228ENST00000515737 SNX10Q9Y5X0 201 aa17.47■□□□□ 0.39
SH3BP2-228ENST00000515737 COL4A6Q14031 1691 aa17.47■□□□□ 0.39
SH3BP2-228ENST00000515737 GOLGA8MH3BSY2 632 aa17.47■□□□□ 0.39
SH3BP2-228ENST00000515737 C2CD2LO14523 706 aa17.47■□□□□ 0.39
SH3BP2-228ENST00000515737 MFSD11O43934 449 aa17.47■□□□□ 0.39
SH3BP2-228ENST00000515737 TTC4O95801 387 aa17.47■□□□□ 0.39
SH3BP2-228ENST00000515737 RPL17P18621 184 aaKnown RBP17.47■□□□□ 0.39
SH3BP2-228ENST00000515737 TPI1P60174 286 aa17.47■□□□□ 0.39
SH3BP2-228ENST00000515737 BASP1P80723 227 aaKnown RBP17.47■□□□□ 0.39
SH3BP2-228ENST00000515737 KRT71Q3SY84 523 aa17.47■□□□□ 0.39
SH3BP2-228ENST00000515737 SLC45A4Q5BKX6 768 aa17.47■□□□□ 0.39
SH3BP2-228ENST00000515737 BZW1Q7L1Q6 419 aaKnown RBP17.47■□□□□ 0.39
SH3BP2-228ENST00000515737 CDKL3Q8IVW4 592 aaPredicted RBP17.47■□□□□ 0.39
SH3BP2-228ENST00000515737 NETO2Q8NC67 525 aa17.47■□□□□ 0.39
SH3BP2-228ENST00000515737 RTP4Q96DX8 246 aa17.47■□□□□ 0.39
SH3BP2-228ENST00000515737 MSI1O43347 362 aaKnown RBP17.46■□□□□ 0.39
SH3BP2-228ENST00000515737 HAPLN1P10915 354 aaPredicted RBP17.46■□□□□ 0.39
SH3BP2-228ENST00000515737 ERCC2P18074 760 aa17.46■□□□□ 0.39
SH3BP2-228ENST00000515737 YWHAQP27348 245 aa17.46■□□□□ 0.39
SH3BP2-228ENST00000515737 OR1D2P34982 312 aa17.46■□□□□ 0.39
SH3BP2-228ENST00000515737 WDR5P61964 334 aaKnown RBP17.46■□□□□ 0.39
SH3BP2-228ENST00000515737 PSMD5Q16401 504 aa17.46■□□□□ 0.39
SH3BP2-228ENST00000515737 ANKRD22Q5VYY1 191 aa17.46■□□□□ 0.39
SH3BP2-228ENST00000515737 IL37Q9NZH6 218 aa17.46■□□□□ 0.39
SH3BP2-228ENST00000515737 GMIPQ9P107 970 aa17.46■□□□□ 0.39
SH3BP2-228ENST00000515737 MTRRQ9UBK8 725 aa17.46■□□□□ 0.39
SH3BP2-228ENST00000515737 GREB1Q4ZG55 1949 aa17.46■□□□□ 0.39
SH3BP2-228ENST00000515737 WDR27A2RRH5 827 aa17.46■□□□□ 0.39
SH3BP2-228ENST00000515737 DCLK1O15075 740 aa17.46■□□□□ 0.39
SH3BP2-228ENST00000515737 BTG3Q14201 252 aaPredicted RBP17.46■□□□□ 0.39
SH3BP2-228ENST00000515737 CEP128Q6ZU80 1094 aa17.46■□□□□ 0.39
SH3BP2-228ENST00000515737 RNF168Q8IYW5 571 aaPredicted RBP17.46■□□□□ 0.39
SH3BP2-228ENST00000515737 TMEM199Q8N511 208 aa17.46■□□□□ 0.39
SH3BP2-228ENST00000515737 SH2D3CQ8N5H7 860 aa17.46■□□□□ 0.39
SH3BP2-228ENST00000515737 NAT8LQ8N9F0 302 aa17.46■□□□□ 0.39
SH3BP2-228ENST00000515737 FBXO32Q969P5 355 aa17.46■□□□□ 0.39
SH3BP2-228ENST00000515737 C9orf72Q96LT7 481 aa17.46■□□□□ 0.39
SH3BP2-228ENST00000515737 OLFM3Q96PB7 478 aa17.46■□□□□ 0.39
SH3BP2-228ENST00000515737 SAYSD1Q9NPB0 183 aa17.46■□□□□ 0.39
SH3BP2-228ENST00000515737 PAK5Q9P286 719 aa17.46■□□□□ 0.39
SH3BP2-228ENST00000515737 PLXNA3P51805 1871 aa17.45■□□□□ 0.38
SH3BP2-228ENST00000515737 MAGEA4P43358 317 aa17.45■□□□□ 0.38
SH3BP2-228ENST00000515737 HCAR3P49019 387 aa17.45■□□□□ 0.38
SH3BP2-228ENST00000515737 GAD2Q05329 585 aa17.45■□□□□ 0.38
SH3BP2-228ENST00000515737 GABPB1Q06547 395 aaPredicted RBP17.45■□□□□ 0.38
SH3BP2-228ENST00000515737 SLC8B1Q6J4K2 584 aa17.45■□□□□ 0.38
SH3BP2-228ENST00000515737 RELL1Q8IUW5 271 aa17.45■□□□□ 0.38
SH3BP2-228ENST00000515737 C2orf15Q8WU43 125 aaKnown RBP17.45■□□□□ 0.38
SH3BP2-228ENST00000515737 TFB1MQ8WVM0 346 aaKnown RBP17.45■□□□□ 0.38
SH3BP2-228ENST00000515737 ATP6V1G3Q96LB4 118 aa17.45■□□□□ 0.38
SH3BP2-228ENST00000515737 ZNF558Q96NG5 402 aa17.45■□□□□ 0.38
SH3BP2-228ENST00000515737 LGMNQ99538 433 aa17.45■□□□□ 0.38
SH3BP2-228ENST00000515737 EPAS1Q99814 870 aa17.45■□□□□ 0.38
SH3BP2-228ENST00000515737 SIK2Q9H0K1 926 aa17.45■□□□□ 0.38
SH3BP2-228ENST00000515737 NINJ2Q9NZG7 142 aa17.45■□□□□ 0.38
SH3BP2-228ENST00000515737 TCRBV7S3A2A0A539 114 aa17.45■□□□□ 0.38
SH3BP2-228ENST00000515737 FAM92AA1XBS5 289 aa17.45■□□□□ 0.38
SH3BP2-228ENST00000515737 LRIG2O94898 1065 aa17.45■□□□□ 0.38
SH3BP2-228ENST00000515737 RTN3O95197 1032 aaPredicted RBP17.45■□□□□ 0.38
SH3BP2-228ENST00000515737 CCR1P32246 355 aa17.45■□□□□ 0.38
SH3BP2-228ENST00000515737 PAFAH1B3Q15102 231 aaKnown RBP17.45■□□□□ 0.38
SH3BP2-228ENST00000515737 HEATR6Q6AI08 1181 aaKnown RBP17.45■□□□□ 0.38
SH3BP2-228ENST00000515737 HOOK3Q86VS8 718 aa17.45■□□□□ 0.38
SH3BP2-228ENST00000515737 ARHGAP18Q8N392 663 aa17.45■□□□□ 0.38
SH3BP2-228ENST00000515737 FAM76AQ8TAV0 307 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms