RNA–Protein interactions for RNA: ENST00000515710.1

TRIO-223, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 3

Gene TRIO, Length 1,913 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-223ENST00000515710 HSFX1Q9UBD0 423 aa20.82■□□□□ 0.92
TRIO-223ENST00000515710 PRKAG2Q9UGJ0 569 aa20.82■□□□□ 0.92
TRIO-223ENST00000515710 PLAAQ9Y263 795 aa20.82■□□□□ 0.92
TRIO-223ENST00000515710 HACD1B0YJ81 288 aa20.82■□□□□ 0.92
TRIO-223ENST00000515710 RPL22P35268 128 aaKnown RBP20.82■□□□□ 0.92
TRIO-223ENST00000515710 GLUD2P49448 558 aa20.82■□□□□ 0.92
TRIO-223ENST00000515710 USP46P62068 366 aa20.82■□□□□ 0.92
TRIO-223ENST00000515710 DPYSQ14117 519 aa20.82■□□□□ 0.92
TRIO-223ENST00000515710 PAFAH1B3Q15102 231 aaKnown RBP20.82■□□□□ 0.92
TRIO-223ENST00000515710 OTOP2Q7RTS6 562 aa20.82■□□□□ 0.92
TRIO-223ENST00000515710 DDX53Q86TM3 631 aaKnown RBP20.82■□□□□ 0.92
TRIO-223ENST00000515710 CASP10Q92851 521 aa20.82■□□□□ 0.92
TRIO-223ENST00000515710 FBXO32Q969P5 355 aa20.82■□□□□ 0.92
TRIO-223ENST00000515710 RTP4Q96DX8 246 aa20.82■□□□□ 0.92
TRIO-223ENST00000515710 SERPINB11Q96P15 392 aa20.82■□□□□ 0.92
TRIO-223ENST00000515710 YME1L1Q96TA2 773 aa20.82■□□□□ 0.92
TRIO-223ENST00000515710 EPAS1Q99814 870 aa20.82■□□□□ 0.92
TRIO-223ENST00000515710 AFF4Q9UHB7 1163 aaKnown RBP20.82■□□□□ 0.92
TRIO-223ENST00000515710 SMAPO00193 183 aa20.81■□□□□ 0.92
TRIO-223ENST00000515710 ADAM12O43184 909 aa20.81■□□□□ 0.92
TRIO-223ENST00000515710 FGBP02675 491 aa20.81■□□□□ 0.92
TRIO-223ENST00000515710 CCR1P32246 355 aa20.81■□□□□ 0.92
TRIO-223ENST00000515710 PGFP49763 221 aa20.81■□□□□ 0.92
TRIO-223ENST00000515710 GBE1Q04446 702 aa20.81■□□□□ 0.92
TRIO-223ENST00000515710 SLC10A2Q12908 348 aaPredicted RBP20.81■□□□□ 0.92
TRIO-223ENST00000515710 PPP2R5DQ14738 602 aa20.81■□□□□ 0.92
TRIO-223ENST00000515710 C4orf22Q6V702 233 aa20.81■□□□□ 0.92
TRIO-223ENST00000515710 PDZD4Q76G19 769 aaPredicted RBP20.81■□□□□ 0.92
TRIO-223ENST00000515710 TRMT10CQ7L0Y3 403 aaKnown RBP20.81■□□□□ 0.92
TRIO-223ENST00000515710 GOLGA6L1Q8N7Z2 621 aa20.81■□□□□ 0.92
TRIO-223ENST00000515710 HAPLN3Q96S86 360 aa20.81■□□□□ 0.92
TRIO-223ENST00000515710 CLSTN3Q9BQT9 956 aa20.81■□□□□ 0.92
TRIO-223ENST00000515710 TLR8Q9NR97 1041 aaKnown RBP20.81■□□□□ 0.92
TRIO-223ENST00000515710 AAASQ9NRG9 546 aa20.81■□□□□ 0.92
TRIO-223ENST00000515710 ETNK2Q9NVF9 386 aa20.81■□□□□ 0.92
TRIO-223ENST00000515710 OSER1Q9NX31 292 aa20.81■□□□□ 0.92
TRIO-223ENST00000515710 DTLQ9NZJ0 730 aa20.81■□□□□ 0.92
TRIO-223ENST00000515710 GMIPQ9P107 970 aa20.81■□□□□ 0.92
TRIO-223ENST00000515710 STK39Q9UEW8 545 aa20.81■□□□□ 0.92
TRIO-223ENST00000515710 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP20.8■□□□□ 0.92
TRIO-223ENST00000515710 I6L893 689 aaPredicted RBP20.8■□□□□ 0.92
TRIO-223ENST00000515710 SOAT2O75908 522 aa20.8■□□□□ 0.92
TRIO-223ENST00000515710 ACTN2P35609 894 aa20.8■□□□□ 0.92
TRIO-223ENST00000515710 PPM1AP35813 382 aa20.8■□□□□ 0.92
TRIO-223ENST00000515710 TPI1P60174 286 aa20.8■□□□□ 0.92
TRIO-223ENST00000515710 SLC45A4Q5BKX6 768 aa20.8■□□□□ 0.92
TRIO-223ENST00000515710 RNASEH2BQ5TBB1 312 aaKnown RBP20.8■□□□□ 0.92
TRIO-223ENST00000515710 TPGS2Q68CL5 300 aa20.8■□□□□ 0.92
TRIO-223ENST00000515710 OLA1Q9NTK5 396 aaKnown RBP20.8■□□□□ 0.92
TRIO-223ENST00000515710 PAK5Q9P286 719 aa20.8■□□□□ 0.92
TRIO-223ENST00000515710 SFMBT1Q9UHJ3 866 aa20.8■□□□□ 0.92
TRIO-223ENST00000515710 RAD54BQ9Y620 910 aa20.8■□□□□ 0.92
TRIO-223ENST00000515710 FAM72CH0Y354 149 aa20.8■□□□□ 0.92
TRIO-223ENST00000515710 H0YGN5 161 aa20.8■□□□□ 0.92
TRIO-223ENST00000515710 DCLK1O15075 740 aa20.8■□□□□ 0.92
TRIO-223ENST00000515710 KCNN4O15554 427 aa20.8■□□□□ 0.92
TRIO-223ENST00000515710 ZNF189O75820 626 aaPredicted RBP20.8■□□□□ 0.92
TRIO-223ENST00000515710 EN2P19622 333 aaPredicted RBP20.8■□□□□ 0.92
TRIO-223ENST00000515710 RBL1P28749 1068 aa20.8■□□□□ 0.92
TRIO-223ENST00000515710 FAM72AQ5TYM5 149 aa20.8■□□□□ 0.92
TRIO-223ENST00000515710 FAM72DQ6L9T8 149 aa20.8■□□□□ 0.92
TRIO-223ENST00000515710 FAM72BQ86X60 149 aa20.8■□□□□ 0.92
TRIO-223ENST00000515710 PPIL6Q8IXY8 311 aa20.8■□□□□ 0.92
TRIO-223ENST00000515710 GPR65Q8IYL9 337 aa20.8■□□□□ 0.92
TRIO-223ENST00000515710 ZCCHC9Q8N567 271 aaKnown RBP20.8■□□□□ 0.92
TRIO-223ENST00000515710 STKLD1Q8NE28 680 aa20.8■□□□□ 0.92
TRIO-223ENST00000515710 GPR152Q8TDT2 470 aa20.8■□□□□ 0.92
TRIO-223ENST00000515710 OR12D3Q9UGF7 316 aa20.8■□□□□ 0.92
TRIO-223ENST00000515710 SHOC2Q9UQ13 582 aa20.8■□□□□ 0.92
TRIO-223ENST00000515710 NFS1Q9Y697 457 aa20.8■□□□□ 0.92
TRIO-223ENST00000515710 PLXNA3P51805 1871 aa20.79■□□□□ 0.92
TRIO-223ENST00000515710 SLC38A8A6NNN8 435 aa20.79■□□□□ 0.92
TRIO-223ENST00000515710 GOLGA8KD6RF30 607 aa20.79■□□□□ 0.92
TRIO-223ENST00000515710 C2CD2LO14523 706 aa20.79■□□□□ 0.92
TRIO-223ENST00000515710 ABLIM3O94929 683 aa20.79■□□□□ 0.92
TRIO-223ENST00000515710 RPL17P18621 184 aaKnown RBP20.79■□□□□ 0.92
TRIO-223ENST00000515710 HTR7P34969 479 aa20.79■□□□□ 0.92
TRIO-223ENST00000515710 CHKAP35790 457 aa20.79■□□□□ 0.92
TRIO-223ENST00000515710 EIF3BP55884 814 aaKnown RBP20.79■□□□□ 0.92
TRIO-223ENST00000515710 TAF10Q12962 218 aa20.79■□□□□ 0.92
TRIO-223ENST00000515710 C16orf59Q7L2K0 433 aa20.79■□□□□ 0.92
TRIO-223ENST00000515710 ZNF771Q7L3S4 317 aaPredicted RBP20.79■□□□□ 0.92
TRIO-223ENST00000515710 HOOK3Q86VS8 718 aa20.79■□□□□ 0.92
TRIO-223ENST00000515710 CCDC25Q86WR0 208 aa20.79■□□□□ 0.92
TRIO-223ENST00000515710 RELL1Q8IUW5 271 aa20.79■□□□□ 0.92
TRIO-223ENST00000515710 ZNF461Q8TAF7 563 aa20.79■□□□□ 0.92
TRIO-223ENST00000515710 OLFM3Q96PB7 478 aa20.79■□□□□ 0.92
TRIO-223ENST00000515710 QKIQ96PU8 341 aaKnown RBP eCLIP20.79■□□□□ 0.92
TRIO-223ENST00000515710 TTLL2Q9BWV7 592 aa20.79■□□□□ 0.92
TRIO-223ENST00000515710 ZBBXA8MT70 800 aa20.78■□□□□ 0.92
TRIO-223ENST00000515710 URODP06132 367 aa20.78■□□□□ 0.92
TRIO-223ENST00000515710 SLC2A3P11169 496 aa20.78■□□□□ 0.92
TRIO-223ENST00000515710 ERCC2P18074 760 aa20.78■□□□□ 0.92
TRIO-223ENST00000515710 FPGSQ05932 587 aa20.78■□□□□ 0.92
TRIO-223ENST00000515710 TFB1MQ8WVM0 346 aaKnown RBP20.78■□□□□ 0.92
TRIO-223ENST00000515710 MCOLN1Q9GZU1 580 aa20.78■□□□□ 0.92
TRIO-223ENST00000515710 SEMA4AQ9H3S1 761 aa20.78■□□□□ 0.92
TRIO-223ENST00000515710 TLR6Q9Y2C9 796 aa20.78■□□□□ 0.92
TRIO-223ENST00000515710 FARP1Q9Y4F1 1045 aaPredicted RBP20.78■□□□□ 0.92
TRIO-223ENST00000515710 PCDHB12Q9Y5F1 795 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms