RNA–Protein interactions for RNA: ENST00000515682.5

SH3TC1-225, Transcript of SH3 domain and tetratricopeptide repeats 1, humanhuman

TSL 2

Gene SH3TC1, Length 4,293 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1-225ENST00000515682 TBC1D23Q9NUY8 699 aa14□□□□□ -0.17
SH3TC1-225ENST00000515682 BFARQ9NZS9 450 aa14□□□□□ -0.17
SH3TC1-225ENST00000515682 TMCO1Q9UM00 188 aa14□□□□□ -0.17
SH3TC1-225ENST00000515682 POLIQ9UNA4 740 aa14□□□□□ -0.17
SH3TC1-225ENST00000515682 KLF1Q13351 362 aaPredicted RBP13.99□□□□□ -0.17
SH3TC1-225ENST00000515682 TAF5Q15542 800 aa13.99□□□□□ -0.17
SH3TC1-225ENST00000515682 C1orf220Q5T0J3 134 aa13.99□□□□□ -0.17
SH3TC1-225ENST00000515682 TNS4Q8IZW8 715 aa13.99□□□□□ -0.17
SH3TC1-225ENST00000515682 KYQ8NBH2 561 aa13.99□□□□□ -0.17
SH3TC1-225ENST00000515682 OR6B3Q8NGW1 331 aa13.99□□□□□ -0.17
SH3TC1-225ENST00000515682 DDX1Q92499 740 aaKnown RBP13.99□□□□□ -0.17
SH3TC1-225ENST00000515682 PTCD3Q96EY7 689 aaKnown RBP13.99□□□□□ -0.17
SH3TC1-225ENST00000515682 MFSD14AQ96MC6 490 aa13.99□□□□□ -0.17
SH3TC1-225ENST00000515682 TMEM79Q9BSE2 394 aa13.99□□□□□ -0.17
SH3TC1-225ENST00000515682 MED10Q9BTT4 135 aa13.99□□□□□ -0.17
SH3TC1-225ENST00000515682 ZNF541Q9H0D2 1346 aa13.99□□□□□ -0.17
SH3TC1-225ENST00000515682 PXMP2Q9NR77 195 aa13.99□□□□□ -0.17
SH3TC1-225ENST00000515682 MAP3K20Q9NYL2 800 aaKnown RBP13.99□□□□□ -0.17
SH3TC1-225ENST00000515682 MID2Q9UJV3 735 aa13.99□□□□□ -0.17
SH3TC1-225ENST00000515682 SLC39A10Q9ULF5 831 aa13.99□□□□□ -0.17
SH3TC1-225ENST00000515682 MARF1Q9Y4F3 1742 aaKnown RBP13.99□□□□□ -0.17
SH3TC1-225ENST00000515682 TPP1O14773 563 aa13.99□□□□□ -0.17
SH3TC1-225ENST00000515682 ATP6V1G1O75348 118 aa13.99□□□□□ -0.17
SH3TC1-225ENST00000515682 MT-CO1P00395 513 aa13.99□□□□□ -0.17
SH3TC1-225ENST00000515682 HMGCRP04035 888 aa13.99□□□□□ -0.17
SH3TC1-225ENST00000515682 BPGMP07738 259 aa13.99□□□□□ -0.17
SH3TC1-225ENST00000515682 EEF1DP29692 281 aaKnown RBP13.99□□□□□ -0.17
SH3TC1-225ENST00000515682 MAPK10P53779 464 aa13.99□□□□□ -0.17
SH3TC1-225ENST00000515682 PTP4A2Q12974 167 aa13.99□□□□□ -0.17
SH3TC1-225ENST00000515682 SURF1Q15526 300 aa13.99□□□□□ -0.17
SH3TC1-225ENST00000515682 ZBTB41Q5SVQ8 909 aa13.99□□□□□ -0.17
SH3TC1-225ENST00000515682 LRRC38Q5VT99 294 aa13.99□□□□□ -0.17
SH3TC1-225ENST00000515682 IFNEQ86WN2 208 aa13.99□□□□□ -0.17
SH3TC1-225ENST00000515682 ABI1Q8IZP0 508 aa13.99□□□□□ -0.17
SH3TC1-225ENST00000515682 NETO2Q8NC67 525 aa13.99□□□□□ -0.17
SH3TC1-225ENST00000515682 BHLHE22Q8NFJ8 381 aaPredicted RBP13.99□□□□□ -0.17
SH3TC1-225ENST00000515682 CYGBQ8WWM9 190 aa13.99□□□□□ -0.17
SH3TC1-225ENST00000515682 SKA1Q96BD8 255 aa13.99□□□□□ -0.17
SH3TC1-225ENST00000515682 C17orf75Q9HAS0 396 aa13.99□□□□□ -0.17
SH3TC1-225ENST00000515682 CDH22Q9UJ99 828 aa13.99□□□□□ -0.17
SH3TC1-225ENST00000515682 LSM8O95777 96 aaKnown RBP13.99□□□□□ -0.17
SH3TC1-225ENST00000515682 PRKCBP05771 671 aa13.99□□□□□ -0.17
SH3TC1-225ENST00000515682 ITGA2BP08514 1039 aa13.99□□□□□ -0.17
SH3TC1-225ENST00000515682 AAGABQ6PD74 315 aa13.99□□□□□ -0.17
SH3TC1-225ENST00000515682 CHSY1Q86X52 802 aa13.99□□□□□ -0.17
SH3TC1-225ENST00000515682 DCUN1D1Q96GG9 259 aa13.99□□□□□ -0.17
SH3TC1-225ENST00000515682 ILKAPQ9H0C8 392 aaPredicted RBP13.99□□□□□ -0.17
SH3TC1-225ENST00000515682 MYH11P35749 1972 aa13.99□□□□□ -0.17
SH3TC1-225ENST00000515682 FDFT1P37268 417 aa13.98□□□□□ -0.17
SH3TC1-225ENST00000515682 CYP2R1Q6VVX0 501 aa13.98□□□□□ -0.17
SH3TC1-225ENST00000515682 CLVS1Q8IUQ0 354 aaPredicted RBP13.98□□□□□ -0.17
SH3TC1-225ENST00000515682 RYBPQ8N488 228 aaPredicted RBP13.98□□□□□ -0.17
SH3TC1-225ENST00000515682 TDRD5Q8NAT2 981 aaKnown RBP13.98□□□□□ -0.17
SH3TC1-225ENST00000515682 PHC3Q8NDX5 983 aa13.98□□□□□ -0.17
SH3TC1-225ENST00000515682 PAIP1Q9H074 479 aaKnown RBP13.98□□□□□ -0.17
SH3TC1-225ENST00000515682 C2orf40Q9H1Z8 148 aa13.98□□□□□ -0.17
SH3TC1-225ENST00000515682 E5RJQ4 531 aa13.98□□□□□ -0.17
SH3TC1-225ENST00000515682 HSPA8P11142 646 aaKnown RBP13.98□□□□□ -0.17
SH3TC1-225ENST00000515682 FGFR1P11362 822 aa13.98□□□□□ -0.17
SH3TC1-225ENST00000515682 COX4I1P13073 169 aa13.98□□□□□ -0.17
SH3TC1-225ENST00000515682 C6orf52Q5T4I8 152 aa13.98□□□□□ -0.17
SH3TC1-225ENST00000515682 TWF2Q6IBS0 349 aaKnown RBP13.98□□□□□ -0.17
SH3TC1-225ENST00000515682 PQLC1Q8N2U9 271 aa13.98□□□□□ -0.17
SH3TC1-225ENST00000515682 KLHL23Q8NBE8 558 aa13.98□□□□□ -0.17
SH3TC1-225ENST00000515682 GPAMQ9HCL2 828 aa13.98□□□□□ -0.17
SH3TC1-225ENST00000515682 PLIN4Q96Q06 1357 aa13.98□□□□□ -0.17
SH3TC1-225ENST00000515682 CCDC88AQ3V6T2 1871 aa13.98□□□□□ -0.17
SH3TC1-225ENST00000515682 SIN3BO75182 1162 aa13.98□□□□□ -0.17
SH3TC1-225ENST00000515682 GMNNO75496 209 aa13.98□□□□□ -0.17
SH3TC1-225ENST00000515682 CYP1A1P04798 512 aaPredicted RBP13.98□□□□□ -0.17
SH3TC1-225ENST00000515682 CYP2C8P10632 490 aa13.98□□□□□ -0.17
SH3TC1-225ENST00000515682 GRK2P25098 689 aa13.98□□□□□ -0.17
SH3TC1-225ENST00000515682 HOXD10P28358 340 aa13.98□□□□□ -0.17
SH3TC1-225ENST00000515682 FAM172AQ8WUF8 416 aa13.98□□□□□ -0.17
SH3TC1-225ENST00000515682 ZFRQ96KR1 1074 aaKnown RBP13.98□□□□□ -0.17
SH3TC1-225ENST00000515682 CCDC138Q96M89 665 aa13.98□□□□□ -0.17
SH3TC1-225ENST00000515682 APOL2Q9BQE5 337 aa13.98□□□□□ -0.17
SH3TC1-225ENST00000515682 FRMD8P1Q9BZ68 369 aaPredicted RBP13.98□□□□□ -0.17
SH3TC1-225ENST00000515682 DRC3Q9H069 523 aa13.98□□□□□ -0.17
SH3TC1-225ENST00000515682 MROH8Q9H579 483 aa13.98□□□□□ -0.17
SH3TC1-225ENST00000515682 APOBEC3GQ9HC16 384 aaKnown RBP13.98□□□□□ -0.17
SH3TC1-225ENST00000515682 MYOCOSA0A1B0GUC4 107 aa13.98□□□□□ -0.17
SH3TC1-225ENST00000515682 LCP1P13796 627 aa13.98□□□□□ -0.17
SH3TC1-225ENST00000515682 MLH1P40692 756 aa13.98□□□□□ -0.17
SH3TC1-225ENST00000515682 SLC18A1P54219 525 aa13.98□□□□□ -0.17
SH3TC1-225ENST00000515682 CNTN2Q02246 1040 aa13.98□□□□□ -0.17
SH3TC1-225ENST00000515682 PTK2BQ14289 1009 aa13.98□□□□□ -0.17
SH3TC1-225ENST00000515682 TTC33Q6PID6 262 aaPredicted RBP13.98□□□□□ -0.17
SH3TC1-225ENST00000515682 AMIGO2Q86SJ2 522 aa13.98□□□□□ -0.17
SH3TC1-225ENST00000515682 C10orf107Q8IVU9 208 aa13.98□□□□□ -0.17
SH3TC1-225ENST00000515682 GFM2Q969S9 779 aaKnown RBP13.98□□□□□ -0.17
SH3TC1-225ENST00000515682 SSU72Q9NP77 194 aaKnown RBP13.98□□□□□ -0.17
SH3TC1-225ENST00000515682 DCDC2Q9UHG0 476 aa13.98□□□□□ -0.17
SH3TC1-225ENST00000515682 CPA4Q9UI42 421 aa13.98□□□□□ -0.17
SH3TC1-225ENST00000515682 SYNPO2Q9UMS6 1093 aa13.98□□□□□ -0.17
SH3TC1-225ENST00000515682 LRCH4O75427 683 aa13.97□□□□□ -0.17
SH3TC1-225ENST00000515682 TCF7P36402 384 aaPredicted RBP13.97□□□□□ -0.17
SH3TC1-225ENST00000515682 AVPR1AP37288 418 aa13.97□□□□□ -0.17
SH3TC1-225ENST00000515682 MRPS9P82933 396 aaKnown RBP13.97□□□□□ -0.17
SH3TC1-225ENST00000515682 WASHC5Q12768 1159 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms