RNA–Protein interactions for RNA: ENST00000515529.4

DDR1-279, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 340 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-279ENST00000515529 IER2Q9BTL4 223 aa26.98■■□□□ 1.91
DDR1-279ENST00000515529 ARHGEF4Q9NR80 690 aa26.98■■□□□ 1.91
DDR1-279ENST00000515529 DNAJC17Q9NVM6 304 aaKnown RBP26.98■■□□□ 1.91
DDR1-279ENST00000515529 PLK2Q9NYY3 685 aa26.98■■□□□ 1.91
DDR1-279ENST00000515529 PAXBP1Q9Y5B6 917 aa26.98■■□□□ 1.91
DDR1-279ENST00000515529 GALR2O43603 387 aaPredicted RBP26.97■■□□□ 1.91
DDR1-279ENST00000515529 F9P00740 461 aa26.97■■□□□ 1.91
DDR1-279ENST00000515529 EGFP01133 1207 aa26.97■■□□□ 1.91
DDR1-279ENST00000515529 KRT3P12035 628 aa26.97■■□□□ 1.91
DDR1-279ENST00000515529 FLT3P36888 993 aa26.97■■□□□ 1.91
DDR1-279ENST00000515529 GSCP56915 257 aaPredicted RBP26.97■■□□□ 1.91
DDR1-279ENST00000515529 PTP4A2Q12974 167 aa26.97■■□□□ 1.91
DDR1-279ENST00000515529 FZD5Q13467 585 aa26.97■■□□□ 1.91
DDR1-279ENST00000515529 CCINQ13939 588 aa26.97■■□□□ 1.91
DDR1-279ENST00000515529 SLC25A52Q3SY17 297 aa26.97■■□□□ 1.91
DDR1-279ENST00000515529 MPPE1Q53F39 396 aa26.97■■□□□ 1.91
DDR1-279ENST00000515529 GRAMD4Q6IC98 578 aa26.97■■□□□ 1.91
DDR1-279ENST00000515529 ARCQ7LC44 396 aa26.97■■□□□ 1.91
DDR1-279ENST00000515529 TMC6Q7Z403 805 aa26.97■■□□□ 1.91
DDR1-279ENST00000515529 C12orf40Q86WS4 652 aa26.97■■□□□ 1.91
DDR1-279ENST00000515529 MCOLN2Q8IZK6 566 aa26.97■■□□□ 1.91
DDR1-279ENST00000515529 C3orf20Q8ND61 904 aa26.97■■□□□ 1.91
DDR1-279ENST00000515529 OR8K1Q8NGG5 319 aa26.97■■□□□ 1.91
DDR1-279ENST00000515529 NPY6RQ99463 290 aa26.97■■□□□ 1.91
DDR1-279ENST00000515529 CHRDQ9H2X0 955 aa26.97■■□□□ 1.91
DDR1-279ENST00000515529 FBRSL1Q9HCM7 1045 aaKnown RBP26.97■■□□□ 1.91
DDR1-279ENST00000515529 STOML2Q9UJZ1 356 aa26.97■■□□□ 1.91
DDR1-279ENST00000515529 TMEM59LQ9UK28 342 aa26.97■■□□□ 1.91
DDR1-279ENST00000515529 KMT2EQ8IZD2 1858 aa26.97■■□□□ 1.91
DDR1-279ENST00000515529 TYW5A2RUC4 315 aaKnown RBP26.96■■□□□ 1.91
DDR1-279ENST00000515529 CACNG3O60359 315 aa26.96■■□□□ 1.91
DDR1-279ENST00000515529 TSPAN3O60637 253 aa26.96■■□□□ 1.91
DDR1-279ENST00000515529 TULP3O75386 442 aa26.96■■□□□ 1.91
DDR1-279ENST00000515529 GZMAP12544 262 aa26.96■■□□□ 1.91
DDR1-279ENST00000515529 DEUP1Q05D60 604 aa26.96■■□□□ 1.91
DDR1-279ENST00000515529 MTA1Q13330 715 aa26.96■■□□□ 1.91
DDR1-279ENST00000515529 HGSNATQ68CP4 663 aa26.96■■□□□ 1.91
DDR1-279ENST00000515529 TMA16Q96EY4 203 aaKnown RBP26.96■■□□□ 1.91
DDR1-279ENST00000515529 VCPIP1Q96JH7 1222 aa26.96■■□□□ 1.91
DDR1-279ENST00000515529 BTN2A3PQ96KV6 586 aa26.96■■□□□ 1.91
DDR1-279ENST00000515529 TAS2R14Q9NYV8 317 aa26.96■■□□□ 1.91
DDR1-279ENST00000515529 DDX3XO00571 662 aaKnown RBP eCLIP26.95■■□□□ 1.99e-8■■■■■ 53.3
DDR1-279ENST00000515529 KAT7O95251 611 aa26.95■■□□□ 1.9
DDR1-279ENST00000515529 PDGFRAP16234 1089 aa26.95■■□□□ 1.9
DDR1-279ENST00000515529 COL9A1P20849 921 aa26.95■■□□□ 1.9
DDR1-279ENST00000515529 SDC4P31431 198 aa26.95■■□□□ 1.9
DDR1-279ENST00000515529 GRIA2P42262 883 aa26.95■■□□□ 1.9
DDR1-279ENST00000515529 ETFBKMTQ8IXQ9 262 aa26.95■■□□□ 1.9
DDR1-279ENST00000515529 EMC1Q8N766 993 aa26.95■■□□□ 1.9
DDR1-279ENST00000515529 TBCBQ99426 244 aa26.95■■□□□ 1.9
DDR1-279ENST00000515529 KCNH6Q9H252 994 aa26.95■■□□□ 1.9
DDR1-279ENST00000515529 TBC1D3BA6NDS4 549 aa26.94■■□□□ 1.9
DDR1-279ENST00000515529 AP5Z1O43299 807 aa26.94■■□□□ 1.9
DDR1-279ENST00000515529 LAMTOR5O43504 91 aa26.94■■□□□ 1.9
DDR1-279ENST00000515529 RTN2O75298 545 aa26.94■■□□□ 1.9
DDR1-279ENST00000515529 PENKP01210 267 aaPredicted RBP26.94■■□□□ 1.9
DDR1-279ENST00000515529 FTLP02792 175 aaPredicted RBP26.94■■□□□ 1.9
DDR1-279ENST00000515529 DESP17661 470 aa26.94■■□□□ 1.9
DDR1-279ENST00000515529 DGKGP49619 791 aa26.94■■□□□ 1.9
DDR1-279ENST00000515529 PPP2R5DQ14738 602 aa26.94■■□□□ 1.9
DDR1-279ENST00000515529 FYB2Q5VWT5 728 aa26.94■■□□□ 1.9
DDR1-279ENST00000515529 DCUN1D2Q6PH85 259 aa26.94■■□□□ 1.9
DDR1-279ENST00000515529 CHSY1Q86X52 802 aa26.94■■□□□ 1.9
DDR1-279ENST00000515529 CNGA4Q8IV77 575 aa26.94■■□□□ 1.9
DDR1-279ENST00000515529 C1orf210Q8IVY1 113 aa26.94■■□□□ 1.9
DDR1-279ENST00000515529 TRIM11Q96F44 468 aa26.94■■□□□ 1.9
DDR1-279ENST00000515529 CFAP57Q96MR6 1250 aa26.94■■□□□ 1.9
DDR1-279ENST00000515529 IRX2Q9BZI1 471 aaPredicted RBP26.94■■□□□ 1.9
DDR1-279ENST00000515529 ADAMTS1Q9UHI8 967 aa26.94■■□□□ 1.9
DDR1-279ENST00000515529 MYOFQ9NZM1 2061 aa26.94■■□□□ 1.9
DDR1-279ENST00000515529 GOLGA6L7A0A1B0GV03 622 aa26.93■■□□□ 1.9
DDR1-279ENST00000515529 KCNU1A8MYU2 1149 aa26.93■■□□□ 1.9
DDR1-279ENST00000515529 RNF40O75150 1001 aa26.93■■□□□ 1.9
DDR1-279ENST00000515529 MTAPQ13126 283 aa26.93■■□□□ 1.9
DDR1-279ENST00000515529 RFWD3Q6PCD5 774 aa26.93■■□□□ 1.9
DDR1-279ENST00000515529 Q6ZS52 159 aa26.93■■□□□ 1.9
DDR1-279ENST00000515529 DRC7Q8IY82 874 aa26.93■■□□□ 1.9
DDR1-279ENST00000515529 HJURPQ8NCD3 748 aaPredicted RBP26.93■■□□□ 1.9
DDR1-279ENST00000515529 OLIG1Q8TAK6 271 aa26.93■■□□□ 1.9
DDR1-279ENST00000515529 RXFP2Q8WXD0 754 aa26.93■■□□□ 1.9
DDR1-279ENST00000515529 NT5C3BQ969T7 300 aa26.93■■□□□ 1.9
DDR1-279ENST00000515529 PGAP3Q96FM1 320 aaPredicted RBP26.93■■□□□ 1.9
DDR1-279ENST00000515529 DNAJC7Q99615 494 aa26.93■■□□□ 1.9
DDR1-279ENST00000515529 WDCPQ9H6R7 721 aa26.93■■□□□ 1.9
DDR1-279ENST00000515529 ZNF318Q5VUA4 2279 aa26.92■■□□□ 1.9
DDR1-279ENST00000515529 SIGLEC16A6NMB1 481 aa26.92■■□□□ 1.9
DDR1-279ENST00000515529 MFAP3LO75121 409 aa26.92■■□□□ 1.9
DDR1-279ENST00000515529 ATG13O75143 517 aa26.92■■□□□ 1.9
DDR1-279ENST00000515529 GJB6O95452 261 aa26.92■■□□□ 1.9
DDR1-279ENST00000515529 PLEKP08567 350 aaPredicted RBP26.92■■□□□ 1.9
DDR1-279ENST00000515529 RRM1P23921 792 aa26.92■■□□□ 1.9
DDR1-279ENST00000515529 HNRNPH3P31942 346 aaKnown RBP26.92■■□□□ 1.9
DDR1-279ENST00000515529 RDXP35241 583 aaKnown RBP26.92■■□□□ 1.9
DDR1-279ENST00000515529 ZNF75DP51815 510 aa26.92■■□□□ 1.9
DDR1-279ENST00000515529 SEC13P55735 322 aa26.92■■□□□ 1.9
DDR1-279ENST00000515529 ATP11AP98196 1134 aa26.92■■□□□ 1.9
DDR1-279ENST00000515529 EIF4EBP2Q13542 120 aaPredicted RBP26.92■■□□□ 1.9
DDR1-279ENST00000515529 FAM133BQ5BKY9 247 aaKnown RBP26.92■■□□□ 1.9
DDR1-279ENST00000515529 BRMS1LQ5PSV4 323 aa26.92■■□□□ 1.9
DDR1-279ENST00000515529 NADSYN1Q6IA69 706 aa26.92■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms