RNA–Protein interactions for RNA: ENST00000515459.5

LMNA-223, Transcript of lamin A/C, humanhuman

TSL 5

Gene LMNA, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-223ENST00000515459 EIF4E1BA6NMX2 242 aaKnown RBP16.49■□□□□ 0.23
LMNA-223ENST00000515459 TNFSF14O43557 240 aa16.49■□□□□ 0.23
LMNA-223ENST00000515459 KLRC4O43908 158 aa16.49■□□□□ 0.23
LMNA-223ENST00000515459 HLA-EP13747 358 aa16.49■□□□□ 0.23
LMNA-223ENST00000515459 ACSL1P33121 698 aa16.49■□□□□ 0.23
LMNA-223ENST00000515459 GRIA4P48058 902 aa16.49■□□□□ 0.23
LMNA-223ENST00000515459 VAMP7P51809 220 aa16.49■□□□□ 0.23
LMNA-223ENST00000515459 CYP4F3Q08477 520 aa16.49■□□□□ 0.23
LMNA-223ENST00000515459 CAMK2GQ13555 558 aaPredicted RBP16.49■□□□□ 0.23
LMNA-223ENST00000515459 FAM217AQ8IXS0 508 aa16.49■□□□□ 0.23
LMNA-223ENST00000515459 CCDC150Q8NCX0 1101 aa16.49■□□□□ 0.23
LMNA-223ENST00000515459 ENGASEQ8NFI3 743 aa16.49■□□□□ 0.23
LMNA-223ENST00000515459 PLD4Q96BZ4 506 aa16.49■□□□□ 0.23
LMNA-223ENST00000515459 APOBEC3GQ9HC16 384 aaKnown RBP16.49■□□□□ 0.23
LMNA-223ENST00000515459 OSGEPQ9NPF4 335 aa16.49■□□□□ 0.23
LMNA-223ENST00000515459 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.49■□□□□ 0.23
LMNA-223ENST00000515459 SNX11Q9Y5W9 270 aa16.49■□□□□ 0.23
LMNA-223ENST00000515459 SLCO1B1Q9Y6L6 691 aa16.49■□□□□ 0.23
LMNA-223ENST00000515459 NUMA1Q14980 2115 aa16.48■□□□□ 0.23
LMNA-223ENST00000515459 SLC12A8A0AV02 714 aa16.48■□□□□ 0.23
LMNA-223ENST00000515459 MAPK13O15264 365 aa16.48■□□□□ 0.23
LMNA-223ENST00000515459 GRK6P43250 576 aa16.48■□□□□ 0.23
LMNA-223ENST00000515459 ME1P48163 572 aa16.48■□□□□ 0.23
LMNA-223ENST00000515459 GCLMP48507 274 aa16.48■□□□□ 0.23
LMNA-223ENST00000515459 KMT5BQ4FZB7 885 aa16.48■□□□□ 0.23
LMNA-223ENST00000515459 MPPE1Q53F39 396 aa16.48■□□□□ 0.23
LMNA-223ENST00000515459 RESP18Q5W5W9 173 aa16.48■□□□□ 0.23
LMNA-223ENST00000515459 MARCH9Q86YJ5 346 aa16.48■□□□□ 0.23
LMNA-223ENST00000515459 TAS1R2Q8TE23 839 aa16.48■□□□□ 0.23
LMNA-223ENST00000515459 IGSF8Q969P0 613 aa16.48■□□□□ 0.23
LMNA-223ENST00000515459 HEXIM2Q96MH2 286 aaKnown RBP16.48■□□□□ 0.23
LMNA-223ENST00000515459 BBC3Q96PG8 261 aaPredicted RBP16.48■□□□□ 0.23
LMNA-223ENST00000515459 PCDHA7Q9UN72 937 aa16.48■□□□□ 0.23
LMNA-223ENST00000515459 PLA2G4CQ9UP65 541 aa16.48■□□□□ 0.23
LMNA-223ENST00000515459 ANKRD6Q9Y2G4 727 aa16.48■□□□□ 0.23
LMNA-223ENST00000515459 MUC22E2RYF6 1773 aaPredicted RBP16.48■□□□□ 0.23
LMNA-223ENST00000515459 CELSR3Q9NYQ7 3312 aa16.48■□□□□ 0.23
LMNA-223ENST00000515459 URB1O60287 2271 aaKnown RBP16.48■□□□□ 0.23
LMNA-223ENST00000515459 CALUO43852 315 aaPredicted RBP16.47■□□□□ 0.23
LMNA-223ENST00000515459 PCDHGA12O60330 932 aa16.47■□□□□ 0.23
LMNA-223ENST00000515459 SEMA4FO95754 770 aa16.47■□□□□ 0.23
LMNA-223ENST00000515459 SLFN14P0C7P3 912 aa16.47■□□□□ 0.23
LMNA-223ENST00000515459 C7P10643 843 aa16.47■□□□□ 0.23
LMNA-223ENST00000515459 PDIA4P13667 645 aaKnown RBP16.47■□□□□ 0.23
LMNA-223ENST00000515459 CCT8P50990 548 aa16.47■□□□□ 0.23
LMNA-223ENST00000515459 YWHAGP61981 247 aaKnown RBP eCLIP16.47■□□□□ 0.23
LMNA-223ENST00000515459 PDE4CQ08493 712 aa16.47■□□□□ 0.23
LMNA-223ENST00000515459 CAMK2BQ13554 666 aa16.47■□□□□ 0.23
LMNA-223ENST00000515459 FNDC3BQ53EP0 1204 aaKnown RBP16.47■□□□□ 0.23
LMNA-223ENST00000515459 ZNF394Q53GI3 561 aa16.47■□□□□ 0.23
LMNA-223ENST00000515459 SCUBE3Q8IX30 993 aa16.47■□□□□ 0.23
LMNA-223ENST00000515459 PDCD7Q8N8D1 485 aaKnown RBP16.47■□□□□ 0.23
LMNA-223ENST00000515459 BIRC7Q96CA5 298 aa16.47■□□□□ 0.23
LMNA-223ENST00000515459 ARID3AQ99856 593 aa16.47■□□□□ 0.23
LMNA-223ENST00000515459 UBXN6Q9BZV1 441 aa16.47■□□□□ 0.23
LMNA-223ENST00000515459 BTBD1Q9H0C5 482 aa16.47■□□□□ 0.23
LMNA-223ENST00000515459 TMEM245Q9H330 911 aa16.47■□□□□ 0.23
LMNA-223ENST00000515459 FBRSQ9HAH7 460 aa16.47■□□□□ 0.23
LMNA-223ENST00000515459 TM9SF3Q9HD45 589 aa16.47■□□□□ 0.23
LMNA-223ENST00000515459 SERTAD1Q9UHV2 236 aa16.47■□□□□ 0.23
LMNA-223ENST00000515459 CABIN1Q9Y6J0 2220 aa16.47■□□□□ 0.23
LMNA-223ENST00000515459 TP53BP1Q12888 1972 aaPredicted RBP16.47■□□□□ 0.23
LMNA-223ENST00000515459 GOLGA4Q13439 2230 aaKnown RBP16.46■□□□□ 0.23
LMNA-223ENST00000515459 LOC400499M0QZD8 3231 aa16.46■□□□□ 0.23
LMNA-223ENST00000515459 A0A087WV48 116 aa16.46■□□□□ 0.23
LMNA-223ENST00000515459 FAM149AA5PLN7 773 aa16.46■□□□□ 0.23
LMNA-223ENST00000515459 TRIM49P0CI25 452 aa16.46■□□□□ 0.23
LMNA-223ENST00000515459 TRIM49CP0CI26 452 aa16.46■□□□□ 0.23
LMNA-223ENST00000515459 HOXD9P28356 352 aaPredicted RBP16.46■□□□□ 0.23
LMNA-223ENST00000515459 HLA-FP30511 346 aa16.46■□□□□ 0.23
LMNA-223ENST00000515459 HARS2P49590 506 aaKnown RBP16.46■□□□□ 0.23
LMNA-223ENST00000515459 SLC8A3P57103 927 aa16.46■□□□□ 0.23
LMNA-223ENST00000515459 ZNF445P59923 1031 aa16.46■□□□□ 0.23
LMNA-223ENST00000515459 ZBTB16Q05516 673 aa16.46■□□□□ 0.23
LMNA-223ENST00000515459 PPP3CAQ08209 521 aa16.46■□□□□ 0.23
LMNA-223ENST00000515459 SMAD1Q15797 465 aaKnown RBP16.46■□□□□ 0.23
LMNA-223ENST00000515459 PTPRNQ16849 979 aa16.46■□□□□ 0.23
LMNA-223ENST00000515459 CCDC157Q569K6 752 aa16.46■□□□□ 0.23
LMNA-223ENST00000515459 RAB41Q5JT25 222 aa16.46■□□□□ 0.23
LMNA-223ENST00000515459 INTS8Q75QN2 995 aaKnown RBP16.46■□□□□ 0.23
LMNA-223ENST00000515459 PIGZQ86VD9 579 aa16.46■□□□□ 0.23
LMNA-223ENST00000515459 ZNF366Q8N895 744 aa16.46■□□□□ 0.23
LMNA-223ENST00000515459 WFIKKN2Q8TEU8 576 aa16.46■□□□□ 0.23
LMNA-223ENST00000515459 CYB5D2Q8WUJ1 264 aa16.46■□□□□ 0.23
LMNA-223ENST00000515459 PAGE5Q96GU1 130 aa16.46■□□□□ 0.23
LMNA-223ENST00000515459 TRAF3IP3Q9Y228 551 aa16.46■□□□□ 0.23
LMNA-223ENST00000515459 KNL1Q8NG31 2342 aa16.46■□□□□ 0.23
LMNA-223ENST00000515459 SMG1Q96Q15 3661 aaKnown RBP16.45■□□□□ 0.22
LMNA-223ENST00000515459 E9PAM4 449 aa16.45■□□□□ 0.22
LMNA-223ENST00000515459 K7ELQ4 463 aaPredicted RBP16.45■□□□□ 0.22
LMNA-223ENST00000515459 KCNK3O14649 394 aa16.45■□□□□ 0.22
LMNA-223ENST00000515459 TSPAN3O60637 253 aa16.45■□□□□ 0.22
LMNA-223ENST00000515459 FSBPO95073 299 aa16.45■□□□□ 0.22
LMNA-223ENST00000515459 DNTTP04053 509 aa16.45■□□□□ 0.22
LMNA-223ENST00000515459 KRT13P13646 458 aa16.45■□□□□ 0.22
LMNA-223ENST00000515459 NR2F2P24468 414 aa16.45■□□□□ 0.22
LMNA-223ENST00000515459 CD27P26842 260 aa16.45■□□□□ 0.22
LMNA-223ENST00000515459 TKTL1P51854 596 aa16.45■□□□□ 0.22
LMNA-223ENST00000515459 BCAT1P54687 386 aa16.45■□□□□ 0.22
LMNA-223ENST00000515459 RPS14P62263 151 aaKnown RBP16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms