RNA–Protein interactions for RNA: ENST00000515174.5

SNF8-214, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 823 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-214ENST00000515174 SHOX2O60902 331 aaPredicted RBP10.57□□□□□ -0.72
SNF8-214ENST00000515174 TIMP1P01033 207 aa10.57□□□□□ -0.72
SNF8-214ENST00000515174 GALTP07902 379 aa10.57□□□□□ -0.72
SNF8-214ENST00000515174 USP17L7P0C7H9 530 aa10.57□□□□□ -0.72
SNF8-214ENST00000515174 ACTN2P35609 894 aa10.57□□□□□ -0.72
SNF8-214ENST00000515174 MAGEA4P43358 317 aa10.57□□□□□ -0.72
SNF8-214ENST00000515174 GATMP50440 423 aa10.57□□□□□ -0.72
SNF8-214ENST00000515174 DYNLT1P63172 113 aa10.57□□□□□ -0.72
SNF8-214ENST00000515174 NRG1Q02297 640 aaPredicted RBP10.57□□□□□ -0.72
SNF8-214ENST00000515174 ZNF33AQ06730 810 aa10.57□□□□□ -0.72
SNF8-214ENST00000515174 GPR17Q13304 367 aa10.57□□□□□ -0.72
SNF8-214ENST00000515174 DPYSQ14117 519 aa10.57□□□□□ -0.72
SNF8-214ENST00000515174 STAT4Q14765 748 aa10.57□□□□□ -0.72
SNF8-214ENST00000515174 TRIP13Q15645 432 aaPredicted RBP10.57□□□□□ -0.72
SNF8-214ENST00000515174 PAN2Q504Q3 1202 aaKnown RBP10.57□□□□□ -0.72
SNF8-214ENST00000515174 SLC45A4Q5BKX6 768 aa10.57□□□□□ -0.72
SNF8-214ENST00000515174 EFHC2Q5JST6 749 aa10.57□□□□□ -0.72
SNF8-214ENST00000515174 BRMS1LQ5PSV4 323 aa10.57□□□□□ -0.72
SNF8-214ENST00000515174 ACBD5Q5T8D3 534 aaPredicted RBP10.57□□□□□ -0.72
SNF8-214ENST00000515174 ZNF280DQ6N043 979 aa10.57□□□□□ -0.72
SNF8-214ENST00000515174 MSANTD2Q6P1R3 559 aa10.57□□□□□ -0.72
SNF8-214ENST00000515174 CNKSR3Q6P9H4 555 aa10.57□□□□□ -0.72
SNF8-214ENST00000515174 DARS2Q6PI48 645 aaKnown RBP10.57□□□□□ -0.72
SNF8-214ENST00000515174 PPP1R21Q6ZMI0 780 aa10.57□□□□□ -0.72
SNF8-214ENST00000515174 KDM7AQ6ZMT4 941 aa10.57□□□□□ -0.72
SNF8-214ENST00000515174 PDZD4Q76G19 769 aaPredicted RBP10.57□□□□□ -0.72
SNF8-214ENST00000515174 GPR65Q8IYL9 337 aa10.57□□□□□ -0.72
SNF8-214ENST00000515174 CCDC185Q8N715 623 aa10.57□□□□□ -0.72
SNF8-214ENST00000515174 SPPL2BQ8TCT7 592 aa10.57□□□□□ -0.72
SNF8-214ENST00000515174 CPT1BQ92523 772 aa10.57□□□□□ -0.72
SNF8-214ENST00000515174 NDRG1Q92597 394 aaKnown RBP10.57□□□□□ -0.72
SNF8-214ENST00000515174 PRCCQ92733 491 aaPredicted RBP10.57□□□□□ -0.72
SNF8-214ENST00000515174 SPATA17Q96L03 361 aa10.57□□□□□ -0.72
SNF8-214ENST00000515174 OLFM3Q96PB7 478 aa10.57□□□□□ -0.72
SNF8-214ENST00000515174 HAPLN3Q96S86 360 aa10.57□□□□□ -0.72
SNF8-214ENST00000515174 FAM118BQ9BPY3 351 aa10.57□□□□□ -0.72
SNF8-214ENST00000515174 C1QTNF1Q9BXJ1 281 aa10.57□□□□□ -0.72
SNF8-214ENST00000515174 PBX4Q9BYU1 374 aa10.57□□□□□ -0.72
SNF8-214ENST00000515174 STMN4Q9H169 189 aaPredicted RBP10.57□□□□□ -0.72
SNF8-214ENST00000515174 CDC42EP4Q9H3Q1 356 aaKnown RBP10.57□□□□□ -0.72
SNF8-214ENST00000515174 PIGVQ9NUD9 493 aa10.57□□□□□ -0.72
SNF8-214ENST00000515174 GPATCH2LQ9NWQ4 482 aa10.57□□□□□ -0.72
SNF8-214ENST00000515174 MARCH5Q9NX47 278 aa10.57□□□□□ -0.72
SNF8-214ENST00000515174 HSFX1Q9UBD0 423 aa10.57□□□□□ -0.72
SNF8-214ENST00000515174 SAE1Q9UBE0 346 aaPredicted RBP10.57□□□□□ -0.72
SNF8-214ENST00000515174 DNAJB4Q9UDY4 337 aa10.57□□□□□ -0.72
SNF8-214ENST00000515174 FETUBQ9UGM5 382 aa10.57□□□□□ -0.72
SNF8-214ENST00000515174 SCML2Q9UQR0 700 aa10.57□□□□□ -0.72
SNF8-214ENST00000515174 PCDHB5Q9Y5E4 795 aa10.57□□□□□ -0.72
SNF8-214ENST00000515174 MYO16Q9Y6X6 1858 aa10.57□□□□□ -0.72
SNF8-214ENST00000515174 ABHD14A-ACY1A0A1B0GW23 586 aa10.56□□□□□ -0.72
SNF8-214ENST00000515174 H7C0C1 242 aa10.56□□□□□ -0.72
SNF8-214ENST00000515174 DCLK1O15075 740 aa10.56□□□□□ -0.72
SNF8-214ENST00000515174 EFCAB14O75071 495 aa10.56□□□□□ -0.72
SNF8-214ENST00000515174 AGTP01019 485 aa10.56□□□□□ -0.72
SNF8-214ENST00000515174 IFNB1P01574 187 aa10.56□□□□□ -0.72
SNF8-214ENST00000515174 ZSCAN5DPP0CG00 497 aa10.56□□□□□ -0.72
SNF8-214ENST00000515174 NCAM1P13591 858 aa10.56□□□□□ -0.72
SNF8-214ENST00000515174 ETS1P14921 441 aa10.56□□□□□ -0.72
SNF8-214ENST00000515174 CSF2RAP15509 400 aa10.56□□□□□ -0.72
SNF8-214ENST00000515174 CHKAP35790 457 aa10.56□□□□□ -0.72
SNF8-214ENST00000515174 ATP5OP48047 213 aa10.56□□□□□ -0.72
SNF8-214ENST00000515174 SLC11A1P49279 550 aa10.56□□□□□ -0.72
SNF8-214ENST00000515174 GLUD2P49448 558 aa10.56□□□□□ -0.72
SNF8-214ENST00000515174 PSEN1P49768 467 aa10.56□□□□□ -0.72
SNF8-214ENST00000515174 ATXN1P54253 815 aaKnown RBP10.56□□□□□ -0.72
SNF8-214ENST00000515174 GDF10P55107 478 aa10.56□□□□□ -0.72
SNF8-214ENST00000515174 CDK16Q00536 496 aa10.56□□□□□ -0.72
SNF8-214ENST00000515174 IFFO1Q0D2I5 559 aa10.56□□□□□ -0.72
SNF8-214ENST00000515174 SLC10A2Q12908 348 aaPredicted RBP10.56□□□□□ -0.72
SNF8-214ENST00000515174 MTA1Q13330 715 aa10.56□□□□□ -0.72
SNF8-214ENST00000515174 IKBKEQ14164 716 aa10.56□□□□□ -0.72
SNF8-214ENST00000515174 PDK1Q15118 436 aa10.56□□□□□ -0.72
SNF8-214ENST00000515174 SKIV2LQ15477 1246 aaKnown RBP10.56□□□□□ -0.72
SNF8-214ENST00000515174 RAB30Q15771 203 aa10.56□□□□□ -0.72
SNF8-214ENST00000515174 PPP6R3Q5H9R7 873 aaPredicted RBP10.56□□□□□ -0.72
SNF8-214ENST00000515174 NCBP2-AS2Q69YL0 99 aa10.56□□□□□ -0.72
SNF8-214ENST00000515174 FUT10Q6P4F1 479 aa10.56□□□□□ -0.72
SNF8-214ENST00000515174 ANKS3Q6ZW76 656 aa10.56□□□□□ -0.72
SNF8-214ENST00000515174 CENPUQ71F23 418 aa10.56□□□□□ -0.72
SNF8-214ENST00000515174 FAM131BQ86XD5 332 aa10.56□□□□□ -0.72
SNF8-214ENST00000515174 TDRPQ86YL5 185 aa10.56□□□□□ -0.72
SNF8-214ENST00000515174 RNF168Q8IYW5 571 aaPredicted RBP10.56□□□□□ -0.72
SNF8-214ENST00000515174 NUP93Q8N1F7 819 aa10.56□□□□□ -0.72
SNF8-214ENST00000515174 LRRC43Q8N309 656 aa10.56□□□□□ -0.72
SNF8-214ENST00000515174 RIBC1Q8N443 379 aaPredicted RBP10.56□□□□□ -0.72
SNF8-214ENST00000515174 TMEM199Q8N511 208 aa10.56□□□□□ -0.72
SNF8-214ENST00000515174 FAM71DQ8N9W8 422 aa10.56□□□□□ -0.72
SNF8-214ENST00000515174 MCUQ8NE86 351 aa10.56□□□□□ -0.72
SNF8-214ENST00000515174 SLC7A14Q8TBB6 771 aa10.56□□□□□ -0.72
SNF8-214ENST00000515174 HASPINQ8TF76 798 aa10.56□□□□□ -0.72
SNF8-214ENST00000515174 RNF139Q8WU17 664 aa10.56□□□□□ -0.72
SNF8-214ENST00000515174 QKIQ96PU8 341 aaKnown RBP eCLIP10.56□□□□□ -0.72
SNF8-214ENST00000515174 TMEM209Q96SK2 561 aa10.56□□□□□ -0.72
SNF8-214ENST00000515174 RBM15Q96T37 977 aaKnown RBP eCLIP10.56□□□□□ -0.72
SNF8-214ENST00000515174 FERMT1Q9BQL6 677 aa10.56□□□□□ -0.72
SNF8-214ENST00000515174 CCDC77Q9BR77 488 aa10.56□□□□□ -0.72
SNF8-214ENST00000515174 MTIF3Q9H2K0 278 aaKnown RBP10.56□□□□□ -0.72
SNF8-214ENST00000515174 SMOC2Q9H3U7 446 aa10.56□□□□□ -0.72
SNF8-214ENST00000515174 WDCPQ9H6R7 721 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms