RNA–Protein interactions for RNA: ENST00000514743.5

PDLIM5-219, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 3,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-219ENST00000514743 LLGL1Q15334 1064 aa7.71□□□□□ -1.18
PDLIM5-219ENST00000514743 TGFBIQ15582 683 aa7.71□□□□□ -1.18
PDLIM5-219ENST00000514743 SNAP47Q5SQN1 464 aa7.71□□□□□ -1.18
PDLIM5-219ENST00000514743 ABHD15Q6UXT9 468 aa7.71□□□□□ -1.18
PDLIM5-219ENST00000514743 C15orf39Q6ZRI6 1047 aa7.71□□□□□ -1.18
PDLIM5-219ENST00000514743 CCDC33Q8N5R6 958 aa7.71□□□□□ -1.18
PDLIM5-219ENST00000514743 COG8Q96MW5 612 aa7.71□□□□□ -1.18
PDLIM5-219ENST00000514743 RAB3IPQ96QF0 476 aaPredicted RBP7.71□□□□□ -1.18
PDLIM5-219ENST00000514743 PIP5K1AQ99755 562 aa7.71□□□□□ -1.18
PDLIM5-219ENST00000514743 TUBA1CQ9BQE3 449 aa7.71□□□□□ -1.18
PDLIM5-219ENST00000514743 RAB17Q9H0T7 212 aa7.71□□□□□ -1.18
PDLIM5-219ENST00000514743 LAMP5Q9UJQ1 280 aa7.71□□□□□ -1.18
PDLIM5-219ENST00000514743 ZNF541Q9H0D2 1346 aa7.71□□□□□ -1.18
PDLIM5-219ENST00000514743 SMIM31A0A1B0GVY4 71 aa7.71□□□□□ -1.18
PDLIM5-219ENST00000514743 FGF18O76093 207 aa7.71□□□□□ -1.18
PDLIM5-219ENST00000514743 ZBTB7AO95365 584 aa7.71□□□□□ -1.18
PDLIM5-219ENST00000514743 KRT6AP02538 564 aa7.71□□□□□ -1.18
PDLIM5-219ENST00000514743 KRT6BP04259 564 aa7.71□□□□□ -1.18
PDLIM5-219ENST00000514743 CYP11B1P15538 503 aa7.71□□□□□ -1.18
PDLIM5-219ENST00000514743 PRKAR1BP31321 381 aa7.71□□□□□ -1.18
PDLIM5-219ENST00000514743 ARL1P40616 181 aaPredicted RBP7.71□□□□□ -1.18
PDLIM5-219ENST00000514743 PTPN5P54829 565 aa7.71□□□□□ -1.18
PDLIM5-219ENST00000514743 GPC5P78333 572 aa7.71□□□□□ -1.18
PDLIM5-219ENST00000514743 MAPRE2Q15555 327 aa7.71□□□□□ -1.18
PDLIM5-219ENST00000514743 GSTA3Q16772 222 aa7.71□□□□□ -1.18
PDLIM5-219ENST00000514743 CYP4A22Q5TCH4 519 aa7.71□□□□□ -1.18
PDLIM5-219ENST00000514743 TMC3Q7Z5M5 1100 aa7.71□□□□□ -1.18
PDLIM5-219ENST00000514743 MMAAQ8IVH4 418 aaKnown RBP7.71□□□□□ -1.18
PDLIM5-219ENST00000514743 PPM1KQ8N3J5 372 aa7.71□□□□□ -1.18
PDLIM5-219ENST00000514743 CFAP61Q8NHU2 1237 aa7.71□□□□□ -1.18
PDLIM5-219ENST00000514743 TMC2Q8TDI7 906 aa7.71□□□□□ -1.18
PDLIM5-219ENST00000514743 UBLCP1Q8WVY7 318 aaPredicted RBP7.71□□□□□ -1.18
PDLIM5-219ENST00000514743 ZNF516Q92618 1163 aa7.71□□□□□ -1.18
PDLIM5-219ENST00000514743 HDAC2Q92769 488 aaKnown RBP7.71□□□□□ -1.18
PDLIM5-219ENST00000514743 CEP170P1Q96L14 293 aa7.71□□□□□ -1.18
PDLIM5-219ENST00000514743 WRNIP1Q96S55 665 aa7.71□□□□□ -1.18
PDLIM5-219ENST00000514743 ZSWIM1Q9BR11 485 aa7.71□□□□□ -1.18
PDLIM5-219ENST00000514743 HAPLN2Q9GZV7 340 aa7.71□□□□□ -1.18
PDLIM5-219ENST00000514743 WNT8AQ9H1J5 351 aa7.71□□□□□ -1.18
PDLIM5-219ENST00000514743 C17orf75Q9HAS0 396 aa7.71□□□□□ -1.18
PDLIM5-219ENST00000514743 LTBP3Q9NS15 1303 aa7.71□□□□□ -1.18
PDLIM5-219ENST00000514743 ZDHHC18Q9NUE0 388 aa7.71□□□□□ -1.18
PDLIM5-219ENST00000514743 ARHGAP28Q9P2N2 729 aa7.71□□□□□ -1.18
PDLIM5-219ENST00000514743 ERVK-11Q9UQG0 969 aa7.71□□□□□ -1.18
PDLIM5-219ENST00000514743 POLHQ9Y253 713 aa7.71□□□□□ -1.18
PDLIM5-219ENST00000514743 B8ZZF3 427 aa7.7□□□□□ -1.18
PDLIM5-219ENST00000514743 APOL1O14791 398 aa7.7□□□□□ -1.18
PDLIM5-219ENST00000514743 OPHN1O60890 802 aa7.7□□□□□ -1.18
PDLIM5-219ENST00000514743 PEX11AO75192 247 aa7.7□□□□□ -1.18
PDLIM5-219ENST00000514743 KLHL2O95198 593 aa7.7□□□□□ -1.18
PDLIM5-219ENST00000514743 ALOX5P09917 674 aa7.7□□□□□ -1.18
PDLIM5-219ENST00000514743 RARAP10276 462 aa7.7□□□□□ -1.18
PDLIM5-219ENST00000514743 GFAPP14136 432 aa7.7□□□□□ -1.18
PDLIM5-219ENST00000514743 PTGIRP43119 386 aa7.7□□□□□ -1.18
PDLIM5-219ENST00000514743 BAG6P46379 1132 aa7.7□□□□□ -1.18
PDLIM5-219ENST00000514743 GPR85P60893 370 aa7.7□□□□□ -1.18
PDLIM5-219ENST00000514743 FSTL1Q12841 308 aa7.7□□□□□ -1.18
PDLIM5-219ENST00000514743 ITGA9Q13797 1035 aa7.7□□□□□ -1.18
PDLIM5-219ENST00000514743 Q3ZCU0 254 aa7.7□□□□□ -1.18
PDLIM5-219ENST00000514743 SWSAP1Q6NVH7 229 aa7.7□□□□□ -1.18
PDLIM5-219ENST00000514743 CATSPERGQ6ZRH7 1159 aa7.7□□□□□ -1.18
PDLIM5-219ENST00000514743 SV2AQ7L0J3 742 aa7.7□□□□□ -1.18
PDLIM5-219ENST00000514743 NLRX1Q86UT6 975 aa7.7□□□□□ -1.18
PDLIM5-219ENST00000514743 TICAM1Q8IUC6 712 aa7.7□□□□□ -1.18
PDLIM5-219ENST00000514743 ELMOD2Q8IZ81 293 aa7.7□□□□□ -1.18
PDLIM5-219ENST00000514743 SHCBP1Q8NEM2 672 aa7.7□□□□□ -1.18
PDLIM5-219ENST00000514743 BTBD6Q96KE9 485 aa7.7□□□□□ -1.18
PDLIM5-219ENST00000514743 EPB41L4BQ9H329 900 aa7.7□□□□□ -1.18
PDLIM5-219ENST00000514743 TMBIM4Q9HC24 238 aa7.7□□□□□ -1.18
PDLIM5-219ENST00000514743 JPH1Q9HDC5 661 aaPredicted RBP7.7□□□□□ -1.18
PDLIM5-219ENST00000514743 ARMC1Q9NVT9 282 aa7.7□□□□□ -1.18
PDLIM5-219ENST00000514743 STOML1Q9UBI4 398 aa7.7□□□□□ -1.18
PDLIM5-219ENST00000514743 ATP11BQ9Y2G3 1177 aa7.7□□□□□ -1.18
PDLIM5-219ENST00000514743 PCDHA3Q9Y5H8 950 aa7.7□□□□□ -1.18
PDLIM5-219ENST00000514743 ZSWIM8A7E2V4 1837 aa7.7□□□□□ -1.18
PDLIM5-219ENST00000514743 PTPRJQ12913 1337 aa7.7□□□□□ -1.18
PDLIM5-219ENST00000514743 A6NCN8 305 aa7.7□□□□□ -1.18
PDLIM5-219ENST00000514743 TMEM88BA6NKF7 163 aa7.7□□□□□ -1.18
PDLIM5-219ENST00000514743 ZC3H11AO75152 810 aaKnown RBP eCLIP7.7□□□□□ -1.18
PDLIM5-219ENST00000514743 CALCAP01258 141 aa7.7□□□□□ -1.18
PDLIM5-219ENST00000514743 EDN1P05305 212 aa7.7□□□□□ -1.18
PDLIM5-219ENST00000514743 MYZAPP0CAP1 466 aa7.7□□□□□ -1.18
PDLIM5-219ENST00000514743 ESRRAP11474 423 aaPredicted RBP7.7□□□□□ -1.18
PDLIM5-219ENST00000514743 DRD4P21917 467 aa7.7□□□□□ -1.18
PDLIM5-219ENST00000514743 COMTP21964 271 aa7.7□□□□□ -1.18
PDLIM5-219ENST00000514743 CTNNA2P26232 953 aa7.7□□□□□ -1.18
PDLIM5-219ENST00000514743 SLC26A3P40879 764 aa7.7□□□□□ -1.18
PDLIM5-219ENST00000514743 RAB15P59190 212 aa7.7□□□□□ -1.18
PDLIM5-219ENST00000514743 ACTR2P61160 394 aa7.7□□□□□ -1.18
PDLIM5-219ENST00000514743 CLDN10P78369 228 aa7.7□□□□□ -1.18
PDLIM5-219ENST00000514743 ZNF844Q08AG5 666 aa7.7□□□□□ -1.18
PDLIM5-219ENST00000514743 SIX1Q15475 284 aaPredicted RBP7.7□□□□□ -1.18
PDLIM5-219ENST00000514743 NFE2Q16621 373 aaPredicted RBP7.7□□□□□ -1.18
PDLIM5-219ENST00000514743 TIGD2Q4W5G0 525 aa7.7□□□□□ -1.18
PDLIM5-219ENST00000514743 DUPD1Q68J44 220 aa7.7□□□□□ -1.18
PDLIM5-219ENST00000514743 TTC27Q6P3X3 843 aa7.7□□□□□ -1.18
PDLIM5-219ENST00000514743 POMZP3Q6PJE2 187 aa7.7□□□□□ -1.18
PDLIM5-219ENST00000514743 LRIG3Q6UXM1 1119 aa7.7□□□□□ -1.18
PDLIM5-219ENST00000514743 DEPDC4Q8N2C3 294 aa7.7□□□□□ -1.18
PDLIM5-219ENST00000514743 ARRDC4Q8NCT1 418 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms