RNA–Protein interactions for RNA: ENST00000514352.5

CCSER1-212, Transcript of coiled-coil serine rich protein 1, humanhuman

TSL 2

Gene CCSER1, Length 493 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1-212ENST00000514352 TRIML1Q8N9V2 468 aa3.6□□□□□ -1.83
CCSER1-212ENST00000514352 PRPF38AQ8NAV1 312 aaKnown RBP3.6□□□□□ -1.83
CCSER1-212ENST00000514352 ANKRD20A12PQ8NF67 263 aa3.6□□□□□ -1.83
CCSER1-212ENST00000514352 OR14C36Q8NHC7 312 aa3.6□□□□□ -1.83
CCSER1-212ENST00000514352 TBCKQ8TEA7 893 aa3.6□□□□□ -1.83
CCSER1-212ENST00000514352 TFAP2BQ92481 460 aa3.6□□□□□ -1.83
CCSER1-212ENST00000514352 SMARCE1Q969G3 411 aa3.6□□□□□ -1.83
CCSER1-212ENST00000514352 ZBED3Q96IU2 234 aaPredicted RBP3.6□□□□□ -1.83
CCSER1-212ENST00000514352 PGBD1Q96JS3 809 aa3.6□□□□□ -1.83
CCSER1-212ENST00000514352 SLF1Q9BQI6 1058 aa3.6□□□□□ -1.83
CCSER1-212ENST00000514352 FTOQ9C0B1 505 aaKnown RBP eCLIP3.6□□□□□ -1.83
CCSER1-212ENST00000514352 NT5C3AQ9H0P0 336 aa3.6□□□□□ -1.83
CCSER1-212ENST00000514352 DNAJC18Q9H819 358 aa3.6□□□□□ -1.83
CCSER1-212ENST00000514352 JMJD4Q9H9V9 463 aa3.6□□□□□ -1.83
CCSER1-212ENST00000514352 TUBA8Q9NY65 449 aaPredicted RBP3.6□□□□□ -1.83
CCSER1-212ENST00000514352 SIRPGQ9P1W8 387 aa3.6□□□□□ -1.83
CCSER1-212ENST00000514352 DDX25Q9UHL0 483 aaKnown RBP3.6□□□□□ -1.83
CCSER1-212ENST00000514352 PCDHA6Q9UN73 950 aa3.6□□□□□ -1.83
CCSER1-212ENST00000514352 PCDHAC2Q9Y5I4 1007 aa3.6□□□□□ -1.83
CCSER1-212ENST00000514352 RPTORQ8N122 1335 aa3.6□□□□□ -1.83
CCSER1-212ENST00000514352 KDM3AQ9Y4C1 1321 aa3.6□□□□□ -1.83
CCSER1-212ENST00000514352 GREB1LQ9C091 1923 aaPredicted RBP3.6□□□□□ -1.83
CCSER1-212ENST00000514352 COL4A5P29400 1685 aa3.59□□□□□ -1.83
CCSER1-212ENST00000514352 FAM221BA6H8Z2 402 aa3.59□□□□□ -1.83
CCSER1-212ENST00000514352 B4DLN1 442 aa3.59□□□□□ -1.83
CCSER1-212ENST00000514352 UBE2Q2LH0YL09 131 aa3.59□□□□□ -1.83
CCSER1-212ENST00000514352 CBX4O00257 560 aa3.59□□□□□ -1.83
CCSER1-212ENST00000514352 PLD2O14939 933 aa3.59□□□□□ -1.83
CCSER1-212ENST00000514352 POLR2DO15514 142 aaKnown RBP3.59□□□□□ -1.83
CCSER1-212ENST00000514352 OPA1O60313 960 aa3.59□□□□□ -1.83
CCSER1-212ENST00000514352 DDNO94850 711 aaPredicted RBP3.59□□□□□ -1.83
CCSER1-212ENST00000514352 KIF20AO95235 890 aa3.59□□□□□ -1.83
CCSER1-212ENST00000514352 ICAM1P05362 532 aa3.59□□□□□ -1.83
CCSER1-212ENST00000514352 TPM2P07951 284 aa3.59□□□□□ -1.83
CCSER1-212ENST00000514352 MSNP26038 577 aaKnown RBP3.59□□□□□ -1.83
CCSER1-212ENST00000514352 HOXA7P31268 230 aaPredicted RBP3.59□□□□□ -1.83
CCSER1-212ENST00000514352 EPHX2P34913 555 aa3.59□□□□□ -1.83
CCSER1-212ENST00000514352 ZNF134P52741 427 aa3.59□□□□□ -1.83
CCSER1-212ENST00000514352 SETQ01105 290 aaPredicted RBP3.59□□□□□ -1.83
CCSER1-212ENST00000514352 TPD52L1Q16890 204 aaPredicted RBP3.59□□□□□ -1.83
CCSER1-212ENST00000514352 ANO6Q4KMQ2 910 aa3.59□□□□□ -1.83
CCSER1-212ENST00000514352 CT47A1Q5JQC4 288 aaPredicted RBP3.59□□□□□ -1.83
CCSER1-212ENST00000514352 GJC2Q5T442 439 aaPredicted RBP3.59□□□□□ -1.83
CCSER1-212ENST00000514352 PXDC1Q5TGL8 231 aa3.59□□□□□ -1.83
CCSER1-212ENST00000514352 PPP4R3AQ6IN85 833 aa3.59□□□□□ -1.83
CCSER1-212ENST00000514352 CCDC174Q6PII3 467 aa3.59□□□□□ -1.83
CCSER1-212ENST00000514352 SHC4Q6S5L8 630 aa3.59□□□□□ -1.83
CCSER1-212ENST00000514352 MOXD1Q6UVY6 613 aa3.59□□□□□ -1.83
CCSER1-212ENST00000514352 RBM43Q6ZSC3 357 aaKnown RBP3.59□□□□□ -1.83
CCSER1-212ENST00000514352 ZNF572Q7Z3I7 529 aaPredicted RBP3.59□□□□□ -1.83
CCSER1-212ENST00000514352 KRT26Q7Z3Y9 468 aa3.59□□□□□ -1.83
CCSER1-212ENST00000514352 ANKRD13AQ8IZ07 590 aa3.59□□□□□ -1.83
CCSER1-212ENST00000514352 PDILTQ8N807 584 aa3.59□□□□□ -1.83
CCSER1-212ENST00000514352 MLKLQ8NB16 471 aa3.59□□□□□ -1.83
CCSER1-212ENST00000514352 COA7Q96BR5 231 aa3.59□□□□□ -1.83
CCSER1-212ENST00000514352 DHX58Q96C10 678 aa3.59□□□□□ -1.83
CCSER1-212ENST00000514352 CCDC43Q96MW1 224 aaKnown RBP3.59□□□□□ -1.83
CCSER1-212ENST00000514352 PNKPQ96T60 521 aa3.59□□□□□ -1.83
CCSER1-212ENST00000514352 MAF1Q9H063 256 aa3.59□□□□□ -1.83
CCSER1-212ENST00000514352 CPVLQ9H3G5 476 aa3.59□□□□□ -1.83
CCSER1-212ENST00000514352 MAP3K20Q9NYL2 800 aaKnown RBP3.59□□□□□ -1.83
CCSER1-212ENST00000514352 LRWD1Q9UFC0 647 aa3.59□□□□□ -1.83
CCSER1-212ENST00000514352 EVLQ9UI08 416 aaPredicted RBP3.59□□□□□ -1.83
CCSER1-212ENST00000514352 FBXO2Q9UK22 296 aaPredicted RBP3.59□□□□□ -1.83
CCSER1-212ENST00000514352 CCPG1Q9ULG6 757 aa3.59□□□□□ -1.83
CCSER1-212ENST00000514352 PCDHB1Q9Y5F3 818 aa3.59□□□□□ -1.83
CCSER1-212ENST00000514352 DICER1Q9UPY3 1922 aaKnown RBP3.59□□□□□ -1.83
CCSER1-212ENST00000514352 SIPA1L1O43166 1804 aa3.58□□□□□ -1.84
CCSER1-212ENST00000514352 DOCK1Q14185 1865 aa3.58□□□□□ -1.84
CCSER1-212ENST00000514352 FAM237AA0A1B0GTK4 181 aa3.58□□□□□ -1.84
CCSER1-212ENST00000514352 PRSS38A1L453 326 aa3.58□□□□□ -1.84
CCSER1-212ENST00000514352 GLTPD2A6NH11 291 aa3.58□□□□□ -1.84
CCSER1-212ENST00000514352 PPP6CO00743 305 aa3.58□□□□□ -1.84
CCSER1-212ENST00000514352 TBX3O15119 743 aa3.58□□□□□ -1.84
CCSER1-212ENST00000514352 TOP3BO95985 862 aaKnown RBP3.58□□□□□ -1.84
CCSER1-212ENST00000514352 KRT18P05783 430 aaKnown RBP3.58□□□□□ -1.84
CCSER1-212ENST00000514352 XRCC6P12956 609 aaKnown RBP eCLIP3.58□□□□□ -1.84
CCSER1-212ENST00000514352 VCAM1P19320 739 aa3.58□□□□□ -1.84
CCSER1-212ENST00000514352 CDK11BP21127 795 aaKnown RBP3.58□□□□□ -1.84
CCSER1-212ENST00000514352 MT3P25713 68 aa3.58□□□□□ -1.84
CCSER1-212ENST00000514352 COPB2P35606 906 aa3.58□□□□□ -1.84
CCSER1-212ENST00000514352 EPS15P42566 896 aa3.58□□□□□ -1.84
CCSER1-212ENST00000514352 TOB1P50616 345 aaPredicted RBP3.58□□□□□ -1.84
CCSER1-212ENST00000514352 OAZ1P54368 228 aa3.58□□□□□ -1.84
CCSER1-212ENST00000514352 BACE1P56817 501 aa3.58□□□□□ -1.84
CCSER1-212ENST00000514352 IRX3P78415 501 aaPredicted RBP3.58□□□□□ -1.84
CCSER1-212ENST00000514352 MYL5Q02045 173 aa3.58□□□□□ -1.84
CCSER1-212ENST00000514352 SPP2Q13103 211 aa3.58□□□□□ -1.84
CCSER1-212ENST00000514352 SP140Q13342 867 aa3.58□□□□□ -1.84
CCSER1-212ENST00000514352 PDIA5Q14554 519 aa3.58□□□□□ -1.84
CCSER1-212ENST00000514352 UBE2SQ16763 222 aa3.58□□□□□ -1.84
CCSER1-212ENST00000514352 TKFCQ3LXA3 575 aa3.58□□□□□ -1.84
CCSER1-212ENST00000514352 PITRM1Q5JRX3 1037 aa3.58□□□□□ -1.84
CCSER1-212ENST00000514352 ZBTB41Q5SVQ8 909 aa3.58□□□□□ -1.84
CCSER1-212ENST00000514352 SLC18B1Q6NT16 456 aa3.58□□□□□ -1.84
CCSER1-212ENST00000514352 FASTKD5Q7L8L6 764 aaKnown RBP3.58□□□□□ -1.84
CCSER1-212ENST00000514352 CPXCR1Q8N123 301 aa3.58□□□□□ -1.84
CCSER1-212ENST00000514352 ENGASEQ8NFI3 743 aa3.58□□□□□ -1.84
CCSER1-212ENST00000514352 ACER1Q8TDN7 264 aa3.58□□□□□ -1.84
CCSER1-212ENST00000514352 NSMCE1Q8WV22 266 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms