RNA–Protein interactions for RNA: ENST00000514305.5

USP53-208, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 2

Gene USP53, Length 504 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-208ENST00000514305 RBM12Q9NTZ6 932 aaKnown RBP21.02■□□□□ 0.96
USP53-208ENST00000514305 MTPAPQ9NVV4 582 aaKnown RBP eCLIP21.02■□□□□ 0.96
USP53-208ENST00000514305 STAP1Q9ULZ2 295 aa21.02■□□□□ 0.96
USP53-208ENST00000514305 EPN1Q9Y6I3 576 aaPredicted RBP21.02■□□□□ 0.96
USP53-208ENST00000514305 GOLGA8SH3BPF8 625 aa21.01■□□□□ 0.95
USP53-208ENST00000514305 TADA3O75528 432 aa21.01■□□□□ 0.95
USP53-208ENST00000514305 TDGF1P13385 188 aa21.01■□□□□ 0.95
USP53-208ENST00000514305 GBP1P32455 592 aa21.01■□□□□ 0.95
USP53-208ENST00000514305 NOS2P35228 1153 aa21.01■□□□□ 0.95
USP53-208ENST00000514305 COG7P83436 770 aa21.01■□□□□ 0.95
USP53-208ENST00000514305 SATB1Q01826 763 aa21.01■□□□□ 0.95
USP53-208ENST00000514305 TNK2Q07912 1038 aa21.01■□□□□ 0.95
USP53-208ENST00000514305 PON2Q15165 354 aa21.01■□□□□ 0.95
USP53-208ENST00000514305 DCUN1D2Q6PH85 259 aa21.01■□□□□ 0.95
USP53-208ENST00000514305 OLFML1Q6UWY5 402 aa21.01■□□□□ 0.95
USP53-208ENST00000514305 SCD5Q86SK9 330 aa21.01■□□□□ 0.95
USP53-208ENST00000514305 ZNF653Q96CK0 615 aa21.01■□□□□ 0.95
USP53-208ENST00000514305 HS3ST6Q96QI5 342 aa21.01■□□□□ 0.95
USP53-208ENST00000514305 GKN1Q9NS71 199 aa21.01■□□□□ 0.95
USP53-208ENST00000514305 TDP1Q9NUW8 608 aa21.01■□□□□ 0.95
USP53-208ENST00000514305 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP21.01■□□□□ 0.95
USP53-208ENST00000514305 LCMT1Q9UIC8 334 aa21.01■□□□□ 0.95
USP53-208ENST00000514305 GMEB2Q9UKD1 530 aa21.01■□□□□ 0.95
USP53-208ENST00000514305 INTUQ9ULD6 942 aa21.01■□□□□ 0.95
USP53-208ENST00000514305 SIGLEC16A6NMB1 481 aa21■□□□□ 0.95
USP53-208ENST00000514305 EIF3CLB5ME19 914 aaKnown RBP21■□□□□ 0.95
USP53-208ENST00000514305 OAS1P00973 400 aaKnown RBP21■□□□□ 0.95
USP53-208ENST00000514305 MBL2P11226 248 aaPredicted RBP21■□□□□ 0.95
USP53-208ENST00000514305 SLC7A9P82251 487 aa21■□□□□ 0.95
USP53-208ENST00000514305 CC2D1AQ6P1N0 951 aaPredicted RBP21■□□□□ 0.95
USP53-208ENST00000514305 LRRC8AQ8IWT6 810 aa21■□□□□ 0.95
USP53-208ENST00000514305 SYNPOQ8N3V7 929 aa21■□□□□ 0.95
USP53-208ENST00000514305 EIF3CQ99613 913 aaKnown RBP21■□□□□ 0.95
USP53-208ENST00000514305 NMUR1Q9HB89 426 aa21■□□□□ 0.95
USP53-208ENST00000514305 TAS2R14Q9NYV8 317 aa21■□□□□ 0.95
USP53-208ENST00000514305 CNOT8Q9UFF9 292 aaKnown RBP21■□□□□ 0.95
USP53-208ENST00000514305 ARHGAP6O43182 974 aa20.99■□□□□ 0.95
USP53-208ENST00000514305 DAB1O75553 588 aa20.99■□□□□ 0.95
USP53-208ENST00000514305 NDUFA10O95299 355 aa20.99■□□□□ 0.95
USP53-208ENST00000514305 MAGEA1P43355 309 aa20.99■□□□□ 0.95
USP53-208ENST00000514305 RNASE9P60153 205 aaKnown RBP20.99■□□□□ 0.95
USP53-208ENST00000514305 AMPD2Q01433 879 aa20.99■□□□□ 0.95
USP53-208ENST00000514305 PTP4A2Q12974 167 aa20.99■□□□□ 0.95
USP53-208ENST00000514305 MTA1Q13330 715 aa20.99■□□□□ 0.95
USP53-208ENST00000514305 GAS6Q14393 721 aa20.99■□□□□ 0.95
USP53-208ENST00000514305 PUM1Q14671 1186 aaKnown RBP eCLIP20.99■□□□□ 0.95
USP53-208ENST00000514305 DCAF6Q58WW2 860 aa20.99■□□□□ 0.95
USP53-208ENST00000514305 KIAA1958Q8N8K9 716 aa20.99■□□□□ 0.95
USP53-208ENST00000514305 ARL14EPQ8N8R7 260 aaPredicted RBP20.99■□□□□ 0.95
USP53-208ENST00000514305 CLEC4CQ8WTT0 213 aa20.99■□□□□ 0.95
USP53-208ENST00000514305 NDRG1Q92597 394 aaKnown RBP20.99■□□□□ 0.95
USP53-208ENST00000514305 USP13Q92995 863 aaPredicted RBP20.99■□□□□ 0.95
USP53-208ENST00000514305 PDLIM2Q96JY6 352 aa20.99■□□□□ 0.95
USP53-208ENST00000514305 SERPINB11Q96P15 392 aa20.99■□□□□ 0.95
USP53-208ENST00000514305 NCAPGQ9BPX3 1015 aa20.99■□□□□ 0.95
USP53-208ENST00000514305 TJP2Q9UDY2 1190 aa20.99■□□□□ 0.95
USP53-208ENST00000514305 CCL26Q9Y258 94 aa20.99■□□□□ 0.95
USP53-208ENST00000514305 PAXBP1Q9Y5B6 917 aa20.99■□□□□ 0.95
USP53-208ENST00000514305 GREB1Q4ZG55 1949 aa20.99■□□□□ 0.95
USP53-208ENST00000514305 ANAPC1Q9H1A4 1944 aa20.98■□□□□ 0.95
USP53-208ENST00000514305 C2orf78A6NCI8 922 aa20.98■□□□□ 0.95
USP53-208ENST00000514305 COCHO43405 550 aa20.98■□□□□ 0.95
USP53-208ENST00000514305 OLFM2O95897 454 aa20.98■□□□□ 0.95
USP53-208ENST00000514305 F9P00740 461 aa20.98■□□□□ 0.95
USP53-208ENST00000514305 ABCB4P21439 1286 aa20.98■□□□□ 0.95
USP53-208ENST00000514305 RRM1P23921 792 aa20.98■□□□□ 0.95
USP53-208ENST00000514305 MATKP42679 507 aa20.98■□□□□ 0.95
USP53-208ENST00000514305 RUNX3Q13761 415 aa20.98■□□□□ 0.95
USP53-208ENST00000514305 CCINQ13939 588 aa20.98■□□□□ 0.95
USP53-208ENST00000514305 MSANTD2Q6P1R3 559 aa20.98■□□□□ 0.95
USP53-208ENST00000514305 PRR23BQ6ZRT6 265 aa20.98■□□□□ 0.95
USP53-208ENST00000514305 Q6ZS52 159 aa20.98■□□□□ 0.95
USP53-208ENST00000514305 SND1Q7KZF4 910 aaKnown RBP eCLIP20.98■□□□□ 0.95
USP53-208ENST00000514305 BHLHA9Q7RTU4 235 aa20.98■□□□□ 0.95
USP53-208ENST00000514305 DGLUCYQ7Z3D6 616 aa20.98■□□□□ 0.95
USP53-208ENST00000514305 DEFB106AQ8N104 65 aa20.98■□□□□ 0.95
USP53-208ENST00000514305 EDEM1Q92611 657 aa20.98■□□□□ 0.95
USP53-208ENST00000514305 CALR3Q96L12 384 aaKnown RBP20.98■□□□□ 0.95
USP53-208ENST00000514305 SLC2A13Q96QE2 648 aa20.98■□□□□ 0.95
USP53-208ENST00000514305 FAM83CQ9BQN1 747 aa20.98■□□□□ 0.95
USP53-208ENST00000514305 CCSER2Q9H7U1 834 aa20.98■□□□□ 0.95
USP53-208ENST00000514305 METTL5Q9NRN9 209 aaKnown RBP20.98■□□□□ 0.95
USP53-208ENST00000514305 SPTLC3Q9NUV7 552 aa20.98■□□□□ 0.95
USP53-208ENST00000514305 MARCH2Q9P0N8 246 aa20.98■□□□□ 0.95
USP53-208ENST00000514305 RASAL2Q9UJF2 1139 aa20.98■□□□□ 0.95
USP53-208ENST00000514305 LSM7Q9UK45 103 aaKnown RBP20.98■□□□□ 0.95
USP53-208ENST00000514305 ARHGAP26Q9UNA1 814 aa20.98■□□□□ 0.95
USP53-208ENST00000514305 HBS1LQ9Y450 684 aaKnown RBP20.98■□□□□ 0.95
USP53-208ENST00000514305 HELZP42694 1942 aaKnown RBP20.98■□□□□ 0.95
USP53-208ENST00000514305 PAPSS2O95340 614 aaPredicted RBP20.97■□□□□ 0.95
USP53-208ENST00000514305 LCA5LO95447 670 aa20.97■□□□□ 0.95
USP53-208ENST00000514305 TMEM253P0C7T8 217 aa20.97■□□□□ 0.95
USP53-208ENST00000514305 TCF3P15923 654 aa20.97■□□□□ 0.95
USP53-208ENST00000514305 SDHBP21912 280 aa20.97■□□□□ 0.95
USP53-208ENST00000514305 SDC4P31431 198 aa20.97■□□□□ 0.95
USP53-208ENST00000514305 GALCP54803 685 aa20.97■□□□□ 0.95
USP53-208ENST00000514305 EFEMP1Q12805 493 aa20.97■□□□□ 0.95
USP53-208ENST00000514305 NNTQ13423 1086 aa20.97■□□□□ 0.95
USP53-208ENST00000514305 C2CD6Q53TS8 623 aa20.97■□□□□ 0.95
USP53-208ENST00000514305 PLEKHA7Q6IQ23 1121 aa20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms