RNA–Protein interactions for RNA: ENST00000514027.5

SDHA-216, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 2

Gene SDHA, Length 2,209 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-216ENST00000514027 CAND1Q86VP6 1230 aaKnown RBP12.97□□□□□ -0.33
SDHA-216ENST00000514027 SLC26A11Q86WA9 606 aa12.97□□□□□ -0.33
SDHA-216ENST00000514027 CCNJLQ8IV13 435 aa12.97□□□□□ -0.33
SDHA-216ENST00000514027 VPS52Q8N1B4 723 aa12.97□□□□□ -0.33
SDHA-216ENST00000514027 KHSRPQ92945 711 aaKnown RBP eCLIP12.97□□□□□ -0.33
SDHA-216ENST00000514027 SLC10A4Q96EP9 437 aa12.97□□□□□ -0.33
SDHA-216ENST00000514027 ZNF333Q96JL9 665 aa12.97□□□□□ -0.33
SDHA-216ENST00000514027 TBCBQ99426 244 aa12.97□□□□□ -0.33
SDHA-216ENST00000514027 TRIM55Q9BYV6 548 aa12.97□□□□□ -0.33
SDHA-216ENST00000514027 PPP1R12CQ9BZL4 782 aa12.97□□□□□ -0.33
SDHA-216ENST00000514027 VPS11Q9H270 941 aa12.97□□□□□ -0.33
SDHA-216ENST00000514027 LRMDAQ9H2I8 198 aa12.97□□□□□ -0.33
SDHA-216ENST00000514027 CDHR5Q9HBB8 845 aa12.97□□□□□ -0.33
SDHA-216ENST00000514027 POPDC2Q9HBU9 364 aa12.97□□□□□ -0.33
SDHA-216ENST00000514027 CYLDQ9NQC7 956 aa12.97□□□□□ -0.33
SDHA-216ENST00000514027 KLK14Q9P0G3 267 aa12.97□□□□□ -0.33
SDHA-216ENST00000514027 PDP2Q9P2J9 529 aa12.97□□□□□ -0.33
SDHA-216ENST00000514027 AP4E1Q9UPM8 1137 aa12.97□□□□□ -0.33
SDHA-216ENST00000514027 NR2E3Q9Y5X4 410 aa12.97□□□□□ -0.33
SDHA-216ENST00000514027 BCLAF3A2AJT9 711 aaKnown RBP12.97□□□□□ -0.33
SDHA-216ENST00000514027 MDM4O15151 490 aa12.97□□□□□ -0.33
SDHA-216ENST00000514027 NVLO15381 856 aaKnown RBP12.97□□□□□ -0.33
SDHA-216ENST00000514027 SNAI1O95863 264 aaPredicted RBP12.97□□□□□ -0.33
SDHA-216ENST00000514027 GM2AP17900 193 aa12.97□□□□□ -0.33
SDHA-216ENST00000514027 HOXA11P31270 313 aaPredicted RBP12.97□□□□□ -0.33
SDHA-216ENST00000514027 NEK3P51956 506 aa12.97□□□□□ -0.33
SDHA-216ENST00000514027 RCN2Q14257 317 aa12.97□□□□□ -0.33
SDHA-216ENST00000514027 SOWAHAQ2M3V2 549 aa12.97□□□□□ -0.33
SDHA-216ENST00000514027 TTC39BQ5VTQ0 682 aaPredicted RBP12.97□□□□□ -0.33
SDHA-216ENST00000514027 CDKL3Q8IVW4 592 aaPredicted RBP12.97□□□□□ -0.33
SDHA-216ENST00000514027 ZNF276Q8N554 614 aa12.97□□□□□ -0.33
SDHA-216ENST00000514027 NUDCD1Q96RS6 583 aa12.97□□□□□ -0.33
SDHA-216ENST00000514027 HAPLN3Q96S86 360 aa12.97□□□□□ -0.33
SDHA-216ENST00000514027 GCOM2Q9BZD3 368 aaPredicted RBP12.97□□□□□ -0.33
SDHA-216ENST00000514027 NMRK1Q9NWW6 199 aa12.97□□□□□ -0.33
SDHA-216ENST00000514027 C2CD2LO14523 706 aa12.96□□□□□ -0.33
SDHA-216ENST00000514027 UGT1A9O60656 530 aa12.96□□□□□ -0.33
SDHA-216ENST00000514027 KRT37O76014 449 aa12.96□□□□□ -0.33
SDHA-216ENST00000514027 RECQL4O94761 1208 aa12.96□□□□□ -0.33
SDHA-216ENST00000514027 METTL18O95568 372 aa12.96□□□□□ -0.33
SDHA-216ENST00000514027 SNX16P57768 344 aa12.96□□□□□ -0.33
SDHA-216ENST00000514027 TMED1Q13445 227 aa12.96□□□□□ -0.33
SDHA-216ENST00000514027 PARP6Q2NL67 630 aa12.96□□□□□ -0.33
SDHA-216ENST00000514027 SH2D4BQ5SQS7 431 aa12.96□□□□□ -0.33
SDHA-216ENST00000514027 ZBTB8BQ8NAP8 495 aaPredicted RBP12.96□□□□□ -0.33
SDHA-216ENST00000514027 EMID1Q96A84 441 aaPredicted RBP12.96□□□□□ -0.33
SDHA-216ENST00000514027 RTP4Q96DX8 246 aa12.96□□□□□ -0.33
SDHA-216ENST00000514027 SRPK1Q96SB4 655 aaKnown RBP12.96□□□□□ -0.33
SDHA-216ENST00000514027 SPATA16Q9BXB7 569 aa12.96□□□□□ -0.33
SDHA-216ENST00000514027 SLC13A1Q9BZW2 595 aa12.96□□□□□ -0.33
SDHA-216ENST00000514027 UGT1A7Q9HAW7 530 aa12.96□□□□□ -0.33
SDHA-216ENST00000514027 UGT1A10Q9HAW8 530 aa12.96□□□□□ -0.33
SDHA-216ENST00000514027 UGT1A8Q9HAW9 530 aa12.96□□□□□ -0.33
SDHA-216ENST00000514027 SPATA7Q9P0W8 599 aa12.96□□□□□ -0.33
SDHA-216ENST00000514027 SYNJ2BP-COX16A0A087WUM0 186 aa12.96□□□□□ -0.34
SDHA-216ENST00000514027 CCDC195A0A1B0GUA6 201 aa12.96□□□□□ -0.34
SDHA-216ENST00000514027 HNRNPRO43390 633 aaKnown RBP12.96□□□□□ -0.34
SDHA-216ENST00000514027 SPATA31D3P0C874 917 aa12.96□□□□□ -0.34
SDHA-216ENST00000514027 LMO2P25791 158 aa12.96□□□□□ -0.34
SDHA-216ENST00000514027 EPHB2P29323 1055 aa12.96□□□□□ -0.34
SDHA-216ENST00000514027 L1CAMP32004 1257 aa12.96□□□□□ -0.34
SDHA-216ENST00000514027 EPHX2P34913 555 aa12.96□□□□□ -0.34
SDHA-216ENST00000514027 SH3BGRP55822 239 aaPredicted RBP12.96□□□□□ -0.34
SDHA-216ENST00000514027 BST2Q10589 180 aaKnown RBP12.96□□□□□ -0.34
SDHA-216ENST00000514027 SLC10A2Q12908 348 aaPredicted RBP12.96□□□□□ -0.34
SDHA-216ENST00000514027 LSAMPQ13449 338 aa12.96□□□□□ -0.34
SDHA-216ENST00000514027 BTG3Q14201 252 aaPredicted RBP12.96□□□□□ -0.34
SDHA-216ENST00000514027 DGKDQ16760 1214 aa12.96□□□□□ -0.34
SDHA-216ENST00000514027 SLC45A4Q5BKX6 768 aa12.96□□□□□ -0.34
SDHA-216ENST00000514027 ZNF618Q5T7W0 954 aa12.96□□□□□ -0.34
SDHA-216ENST00000514027 C9orf131Q5VYM1 1079 aa12.96□□□□□ -0.34
SDHA-216ENST00000514027 C9orf57Q5W0N0 161 aa12.96□□□□□ -0.34
SDHA-216ENST00000514027 NOTUMQ6P988 496 aa12.96□□□□□ -0.34
SDHA-216ENST00000514027 CDHR3Q6ZTQ4 885 aa12.96□□□□□ -0.34
SDHA-216ENST00000514027 SPATA31D4Q6ZUB0 917 aa12.96□□□□□ -0.34
SDHA-216ENST00000514027 MPP5Q8N3R9 675 aa12.96□□□□□ -0.34
SDHA-216ENST00000514027 CCDC185Q8N715 623 aa12.96□□□□□ -0.34
SDHA-216ENST00000514027 NETO2Q8NC67 525 aa12.96□□□□□ -0.34
SDHA-216ENST00000514027 KCTD15Q96SI1 283 aaPredicted RBP12.96□□□□□ -0.34
SDHA-216ENST00000514027 MECRQ9BV79 373 aa12.96□□□□□ -0.34
SDHA-216ENST00000514027 KATNBL1Q9H079 304 aa12.96□□□□□ -0.34
SDHA-216ENST00000514027 FAM124BQ9H5Z6 455 aaPredicted RBP12.96□□□□□ -0.34
SDHA-216ENST00000514027 PLEKHA5Q9HAU0 1116 aa12.96□□□□□ -0.34
SDHA-216ENST00000514027 GOLGA2P5Q9HBQ8 144 aa12.96□□□□□ -0.34
SDHA-216ENST00000514027 COX16Q9P0S2 106 aa12.96□□□□□ -0.34
SDHA-216ENST00000514027 GJD2Q9UKL4 321 aa12.96□□□□□ -0.34
SDHA-216ENST00000514027 MFHAS1Q9Y4C4 1052 aa12.96□□□□□ -0.34
SDHA-216ENST00000514027 NUMBLQ9Y6R0 609 aa12.96□□□□□ -0.34
SDHA-216ENST00000514027 COMMD3-BMI1R4GMX3 469 aa12.96□□□□□ -0.34
SDHA-216ENST00000514027 C2orf71A6NGG8 1288 aa12.95□□□□□ -0.34
SDHA-216ENST00000514027 SLC15A5A6NIM6 579 aa12.95□□□□□ -0.34
SDHA-216ENST00000514027 SNRPAP09012 282 aaKnown RBP12.95□□□□□ -0.34
SDHA-216ENST00000514027 T-ENOLP0DO92 83 aa12.95□□□□□ -0.34
SDHA-216ENST00000514027 ETV4P43268 484 aa12.95□□□□□ -0.34
SDHA-216ENST00000514027 RASSF2P50749 326 aa12.95□□□□□ -0.34
SDHA-216ENST00000514027 ARFIP2P53365 341 aa12.95□□□□□ -0.34
SDHA-216ENST00000514027 BCAT1P54687 386 aa12.95□□□□□ -0.34
SDHA-216ENST00000514027 ZBTB16Q05516 673 aa12.95□□□□□ -0.34
SDHA-216ENST00000514027 SLC18A2Q05940 514 aa12.95□□□□□ -0.34
SDHA-216ENST00000514027 HEATR6Q6AI08 1181 aaKnown RBP12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms