RNA–Protein interactions for RNA: ENST00000513868.6

PVT1-203, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best) BASIC

Gene PVT1, Length 1,699 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-203ENST00000513868 BCLAF3A2AJT9 711 aaKnown RBP13.3□□□□□ -0.28
PVT1-203ENST00000513868 H7C0C1 242 aa13.3□□□□□ -0.28
PVT1-203ENST00000513868 DCLK1O15075 740 aa13.3□□□□□ -0.28
PVT1-203ENST00000513868 CREB3O43889 395 aa13.3□□□□□ -0.28
PVT1-203ENST00000513868 RARGP13631 454 aa13.3□□□□□ -0.28
PVT1-203ENST00000513868 ATF6P18850 670 aa13.3□□□□□ -0.28
PVT1-203ENST00000513868 OR1D2P34982 312 aa13.3□□□□□ -0.28
PVT1-203ENST00000513868 ATP5OP48047 213 aa13.3□□□□□ -0.28
PVT1-203ENST00000513868 HCAR3P49019 387 aa13.3□□□□□ -0.28
PVT1-203ENST00000513868 DSG1Q02413 1049 aa13.3□□□□□ -0.28
PVT1-203ENST00000513868 GPS2Q13227 327 aa13.3□□□□□ -0.28
PVT1-203ENST00000513868 XRCC4Q13426 336 aa13.3□□□□□ -0.28
PVT1-203ENST00000513868 BTG3Q14201 252 aaPredicted RBP13.3□□□□□ -0.28
PVT1-203ENST00000513868 MGAT5BQ3V5L5 792 aa13.3□□□□□ -0.28
PVT1-203ENST00000513868 SPOUT1Q5T280 376 aaKnown RBP13.3□□□□□ -0.28
PVT1-203ENST00000513868 MSANTD2Q6P1R3 559 aa13.3□□□□□ -0.28
PVT1-203ENST00000513868 DENND5BQ6ZUT9 1274 aa13.3□□□□□ -0.28
PVT1-203ENST00000513868 RFX8Q6ZV50 586 aa13.3□□□□□ -0.28
PVT1-203ENST00000513868 UBLCP1Q8WVY7 318 aaPredicted RBP13.3□□□□□ -0.28
PVT1-203ENST00000513868 SEPT5Q99719 369 aaPredicted RBP13.3□□□□□ -0.28
PVT1-203ENST00000513868 PABPC3Q9H361 631 aaKnown RBP13.3□□□□□ -0.28
PVT1-203ENST00000513868 GMIPQ9P107 970 aa13.3□□□□□ -0.28
PVT1-203ENST00000513868 TPX2Q9ULW0 747 aaKnown RBP13.3□□□□□ -0.28
PVT1-203ENST00000513868 SNX10Q9Y5X0 201 aa13.3□□□□□ -0.28
PVT1-203ENST00000513868 EEF2KO00418 725 aaKnown RBP13.29□□□□□ -0.28
PVT1-203ENST00000513868 MSI1O43347 362 aaKnown RBP13.29□□□□□ -0.28
PVT1-203ENST00000513868 MFSD11O43934 449 aa13.29□□□□□ -0.28
PVT1-203ENST00000513868 ABLIM3O94929 683 aa13.29□□□□□ -0.28
PVT1-203ENST00000513868 RTN3O95197 1032 aaPredicted RBP13.29□□□□□ -0.28
PVT1-203ENST00000513868 LINC00271P0C7V0 271 aa13.29□□□□□ -0.28
PVT1-203ENST00000513868 LAG3P18627 525 aa13.29□□□□□ -0.28
PVT1-203ENST00000513868 YWHAQP27348 245 aa13.29□□□□□ -0.28
PVT1-203ENST00000513868 RBL1P28749 1068 aa13.29□□□□□ -0.28
PVT1-203ENST00000513868 SLMAPQ14BN4 828 aa13.29□□□□□ -0.28
PVT1-203ENST00000513868 PAFAH1B3Q15102 231 aaKnown RBP13.29□□□□□ -0.28
PVT1-203ENST00000513868 ARL13BQ3SXY8 428 aa13.29□□□□□ -0.28
PVT1-203ENST00000513868 FAM182AQ5T1J6 154 aa13.29□□□□□ -0.28
PVT1-203ENST00000513868 LRIG3Q6UXM1 1119 aa13.29□□□□□ -0.28
PVT1-203ENST00000513868 ZCCHC9Q8N567 271 aaKnown RBP13.29□□□□□ -0.28
PVT1-203ENST00000513868 OR2W6PQ8NHA6 318 aa13.29□□□□□ -0.28
PVT1-203ENST00000513868 HERC2P3Q9BVR0 1158 aa13.29□□□□□ -0.28
PVT1-203ENST00000513868 OSBPL2Q9H1P3 480 aa13.29□□□□□ -0.28
PVT1-203ENST00000513868 NYNRINQ9P2P1 1898 aaKnown RBP13.29□□□□□ -0.28
PVT1-203ENST00000513868 KCNU1A8MYU2 1149 aa13.28□□□□□ -0.28
PVT1-203ENST00000513868 C2CD2LO14523 706 aa13.28□□□□□ -0.28
PVT1-203ENST00000513868 KCNN4O15554 427 aa13.28□□□□□ -0.28
PVT1-203ENST00000513868 SEC24AO95486 1093 aa13.28□□□□□ -0.28
PVT1-203ENST00000513868 RPL10AP62906 217 aaKnown RBP13.28□□□□□ -0.28
PVT1-203ENST00000513868 TAF10Q12962 218 aa13.28□□□□□ -0.28
PVT1-203ENST00000513868 MORF4L2Q15014 288 aa13.28□□□□□ -0.28
PVT1-203ENST00000513868 SLC45A4Q5BKX6 768 aa13.28□□□□□ -0.28
PVT1-203ENST00000513868 BRMS1LQ5PSV4 323 aa13.28□□□□□ -0.28
PVT1-203ENST00000513868 RASIP1Q5U651 963 aa13.28□□□□□ -0.28
PVT1-203ENST00000513868 DDX53Q86TM3 631 aaKnown RBP13.28□□□□□ -0.28
PVT1-203ENST00000513868 RELL1Q8IUW5 271 aa13.28□□□□□ -0.28
PVT1-203ENST00000513868 CCDC33Q8N5R6 958 aa13.28□□□□□ -0.28
PVT1-203ENST00000513868 CPT1BQ92523 772 aa13.28□□□□□ -0.28
PVT1-203ENST00000513868 PRCCQ92733 491 aaPredicted RBP13.28□□□□□ -0.28
PVT1-203ENST00000513868 ARL8AQ96BM9 186 aa13.28□□□□□ -0.28
PVT1-203ENST00000513868 TMEM169Q96HH4 297 aa13.28□□□□□ -0.28
PVT1-203ENST00000513868 LRRC4CQ9HCJ2 640 aa13.28□□□□□ -0.28
PVT1-203ENST00000513868 COMMD8Q9NX08 183 aa13.28□□□□□ -0.28
PVT1-203ENST00000513868 SPG21Q9NZD8 308 aa13.28□□□□□ -0.28
PVT1-203ENST00000513868 OR12D3Q9UGF7 316 aa13.28□□□□□ -0.28
PVT1-203ENST00000513868 NEU3Q9UQ49 428 aa13.28□□□□□ -0.28
PVT1-203ENST00000513868 MTCL1Q9Y4B5 1905 aaKnown RBP13.28□□□□□ -0.28
PVT1-203ENST00000513868 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.28□□□□□ -0.28
PVT1-203ENST00000513868 CFAP69A5D8W1 941 aa13.28□□□□□ -0.28
PVT1-203ENST00000513868 SLC38A8A6NNN8 435 aa13.28□□□□□ -0.28
PVT1-203ENST00000513868 LRIG2O94898 1065 aa13.28□□□□□ -0.28
PVT1-203ENST00000513868 NUDT17P0C025 328 aa13.28□□□□□ -0.28
PVT1-203ENST00000513868 ZDHHC11BP0C7U3 371 aa13.28□□□□□ -0.28
PVT1-203ENST00000513868 ERCC2P18074 760 aa13.28□□□□□ -0.28
PVT1-203ENST00000513868 GLUD2P49448 558 aa13.28□□□□□ -0.28
PVT1-203ENST00000513868 HTRA4P83105 476 aaPredicted RBP13.28□□□□□ -0.28
PVT1-203ENST00000513868 ZNF844Q08AG5 666 aa13.28□□□□□ -0.28
PVT1-203ENST00000513868 SLC29A2Q14542 456 aa13.28□□□□□ -0.28
PVT1-203ENST00000513868 PPP2R5DQ14738 602 aa13.28□□□□□ -0.28
PVT1-203ENST00000513868 HSP90B2PQ58FF3 399 aa13.28□□□□□ -0.28
PVT1-203ENST00000513868 ANKRD22Q5VYY1 191 aa13.28□□□□□ -0.28
PVT1-203ENST00000513868 KIAA1841Q6NSI8 718 aa13.28□□□□□ -0.28
PVT1-203ENST00000513868 CCDC25Q86WR0 208 aa13.28□□□□□ -0.28
PVT1-203ENST00000513868 TP53INP2Q8IXH6 220 aa13.28□□□□□ -0.28
PVT1-203ENST00000513868 ARHGAP18Q8N392 663 aa13.28□□□□□ -0.28
PVT1-203ENST00000513868 NAT8LQ8N9F0 302 aa13.28□□□□□ -0.28
PVT1-203ENST00000513868 NETO2Q8NC67 525 aa13.28□□□□□ -0.28
PVT1-203ENST00000513868 ZNF461Q8TAF7 563 aa13.28□□□□□ -0.28
PVT1-203ENST00000513868 GIPC2Q8TF65 315 aa13.28□□□□□ -0.28
PVT1-203ENST00000513868 BADQ92934 168 aa13.28□□□□□ -0.28
PVT1-203ENST00000513868 FBXO32Q969P5 355 aa13.28□□□□□ -0.28
PVT1-203ENST00000513868 SLC39A13Q96H72 371 aa13.28□□□□□ -0.28
PVT1-203ENST00000513868 QKIQ96PU8 341 aaKnown RBP eCLIP13.28□□□□□ -0.289e-7■■■■□ 20
PVT1-203ENST00000513868 HAPLN3Q96S86 360 aa13.28□□□□□ -0.28
PVT1-203ENST00000513868 TTLL2Q9BWV7 592 aa13.28□□□□□ -0.28
PVT1-203ENST00000513868 FOXP3Q9BZS1 431 aa13.28□□□□□ -0.28
PVT1-203ENST00000513868 MCOLN1Q9GZU1 580 aa13.28□□□□□ -0.28
PVT1-203ENST00000513868 TSPYL1Q9H0U9 437 aa13.28□□□□□ -0.28
PVT1-203ENST00000513868 CDC42EP4Q9H3Q1 356 aaKnown RBP13.28□□□□□ -0.28
PVT1-203ENST00000513868 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.28□□□□□ -0.283e-6■■■■□ 22.1
PVT1-203ENST00000513868 CLIC5Q9NZA1 410 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms