RNA–Protein interactions for RNA: ENST00000513143.5

PDPN-210, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-210ENST00000513143 NUGGCQ68CJ6 796 aa13.01□□□□□ -0.33
PDPN-210ENST00000513143 GET4Q7L5D6 327 aaPredicted RBP13.01□□□□□ -0.33
PDPN-210ENST00000513143 PSTKQ8IV42 348 aaKnown RBP13.01□□□□□ -0.33
PDPN-210ENST00000513143 UNC45BQ8IWX7 931 aa13.01□□□□□ -0.33
PDPN-210ENST00000513143 CCDC185Q8N715 623 aa13.01□□□□□ -0.33
PDPN-210ENST00000513143 ADAMTS19Q8TE59 1207 aa13.01□□□□□ -0.33
PDPN-210ENST00000513143 PPM1EQ8WY54 764 aa13.01□□□□□ -0.33
PDPN-210ENST00000513143 KRT35Q92764 455 aa13.01□□□□□ -0.33
PDPN-210ENST00000513143 FGF13Q92913 245 aa13.01□□□□□ -0.33
PDPN-210ENST00000513143 HLA-CQ95604 372 aa13.01□□□□□ -0.33
PDPN-210ENST00000513143 SNRNP25Q9BV90 132 aaKnown RBP13.01□□□□□ -0.33
PDPN-210ENST00000513143 TLR10Q9BXR5 811 aa13.01□□□□□ -0.33
PDPN-210ENST00000513143 TKTL2Q9H0I9 626 aa13.01□□□□□ -0.33
PDPN-210ENST00000513143 POMKQ9H5K3 350 aa13.01□□□□□ -0.33
PDPN-210ENST00000513143 ZWILCHQ9H900 591 aa13.01□□□□□ -0.33
PDPN-210ENST00000513143 ANLNQ9NQW6 1124 aa13.01□□□□□ -0.33
PDPN-210ENST00000513143 SMPD4Q9NXE4 827 aa13.01□□□□□ -0.33
PDPN-210ENST00000513143 CDH7Q9ULB5 785 aa13.01□□□□□ -0.33
PDPN-210ENST00000513143 FZD10Q9ULW2 581 aa13.01□□□□□ -0.33
PDPN-210ENST00000513143 PACSIN2Q9UNF0 486 aaPredicted RBP13.01□□□□□ -0.33
PDPN-210ENST00000513143 USP15Q9Y4E8 981 aaPredicted RBP13.01□□□□□ -0.33
PDPN-210ENST00000513143 C5orf42Q9H799 3197 aa13□□□□□ -0.33
PDPN-210ENST00000513143 GRXCR2A6NFK2 248 aa13□□□□□ -0.33
PDPN-210ENST00000513143 I6L893 689 aaPredicted RBP13□□□□□ -0.33
PDPN-210ENST00000513143 ENC1O14682 589 aa13□□□□□ -0.33
PDPN-210ENST00000513143 FANCGO15287 622 aa13□□□□□ -0.33
PDPN-210ENST00000513143 APOEP02649 317 aa13□□□□□ -0.33
PDPN-210ENST00000513143 TCF3P15923 654 aa13□□□□□ -0.33
PDPN-210ENST00000513143 MARCKSL1P49006 195 aa13□□□□□ -0.33
PDPN-210ENST00000513143 HARS2P49590 506 aaKnown RBP13□□□□□ -0.33
PDPN-210ENST00000513143 KCNQ1P51787 676 aa13□□□□□ -0.33
PDPN-210ENST00000513143 SMAD4Q13485 552 aaKnown RBP13□□□□□ -0.33
PDPN-210ENST00000513143 RPS6KA1Q15418 735 aa13□□□□□ -0.33
PDPN-210ENST00000513143 ARL13BQ3SXY8 428 aa13□□□□□ -0.33
PDPN-210ENST00000513143 ATP13A4Q4VNC1 1196 aa13□□□□□ -0.33
PDPN-210ENST00000513143 KCNT1Q5JUK3 1230 aa13□□□□□ -0.33
PDPN-210ENST00000513143 DDX42Q86XP3 938 aaKnown RBP eCLIP13□□□□□ -0.33
PDPN-210ENST00000513143 ARID3BQ8IVW6 561 aaPredicted RBP13□□□□□ -0.33
PDPN-210ENST00000513143 UBL4BQ8N7F7 174 aa13□□□□□ -0.33
PDPN-210ENST00000513143 ATP6V0D2Q8N8Y2 350 aa13□□□□□ -0.33
PDPN-210ENST00000513143 ZSCAN18Q8TBC5 510 aaPredicted RBP13□□□□□ -0.33
PDPN-210ENST00000513143 USP13Q92995 863 aaPredicted RBP13□□□□□ -0.33
PDPN-210ENST00000513143 AZIN2Q96A70 460 aa13□□□□□ -0.33
PDPN-210ENST00000513143 BTN2A3PQ96KV6 586 aa13□□□□□ -0.33
PDPN-210ENST00000513143 HAPLN3Q96S86 360 aa13□□□□□ -0.33
PDPN-210ENST00000513143 NAPGQ99747 312 aaPredicted RBP13□□□□□ -0.33
PDPN-210ENST00000513143 TMPRSS4Q9NRS4 437 aa13□□□□□ -0.33
PDPN-210ENST00000513143 TDP1Q9NUW8 608 aa13□□□□□ -0.33
PDPN-210ENST00000513143 DDX56Q9NY93 547 aaKnown RBP13□□□□□ -0.33
PDPN-210ENST00000513143 SLC12A6Q9UHW9 1150 aa13□□□□□ -0.33
PDPN-210ENST00000513143 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13□□□□□ -0.33
PDPN-210ENST00000513143 XIRP2A4UGR9 3374 aa12.99□□□□□ -0.33
PDPN-210ENST00000513143 LEFTY2O00292 366 aa12.99□□□□□ -0.33
PDPN-210ENST00000513143 MAP3K13O43283 966 aa12.99□□□□□ -0.33
PDPN-210ENST00000513143 MBTPS2O43462 519 aa12.99□□□□□ -0.33
PDPN-210ENST00000513143 GREM1O60565 184 aa12.99□□□□□ -0.33
PDPN-210ENST00000513143 PAGE1O75459 146 aa12.99□□□□□ -0.33
PDPN-210ENST00000513143 PRAMEF12O95522 483 aa12.99□□□□□ -0.33
PDPN-210ENST00000513143 LATS1O95835 1130 aa12.99□□□□□ -0.33
PDPN-210ENST00000513143 KLKB1P03952 638 aa12.99□□□□□ -0.33
PDPN-210ENST00000513143 ATP1A1P05023 1023 aaKnown RBP12.99□□□□□ -0.33
PDPN-210ENST00000513143 TNNT1P13805 278 aa12.99□□□□□ -0.33
PDPN-210ENST00000513143 CORO1AP31146 461 aaKnown RBP12.99□□□□□ -0.33
PDPN-210ENST00000513143 ARSEP51690 589 aa12.99□□□□□ -0.33
PDPN-210ENST00000513143 RWDD2BP57060 319 aa12.99□□□□□ -0.33
PDPN-210ENST00000513143 DPYSL2Q16555 572 aa12.99□□□□□ -0.33
PDPN-210ENST00000513143 SMTNL2Q2TAL5 461 aa12.99□□□□□ -0.33
PDPN-210ENST00000513143 EFHC2Q5JST6 749 aa12.99□□□□□ -0.33
PDPN-210ENST00000513143 FAM78AQ5JUQ0 283 aa12.99□□□□□ -0.33
PDPN-210ENST00000513143 SYT10Q6XYQ8 523 aa12.99□□□□□ -0.33
PDPN-210ENST00000513143 HTR3DQ70Z44 454 aa12.99□□□□□ -0.33
PDPN-210ENST00000513143 KATNAL2Q8IYT4 538 aa12.99□□□□□ -0.33
PDPN-210ENST00000513143 SH3RF2Q8TEC5 729 aa12.99□□□□□ -0.33
PDPN-210ENST00000513143 HSPH1Q92598 858 aa12.99□□□□□ -0.33
PDPN-210ENST00000513143 ALG3Q92685 438 aa12.99□□□□□ -0.33
PDPN-210ENST00000513143 SMARCD2Q92925 531 aa12.99□□□□□ -0.33
PDPN-210ENST00000513143 WBP2Q969T9 261 aa12.99□□□□□ -0.33
PDPN-210ENST00000513143 C1orf74Q96LT6 269 aa12.99□□□□□ -0.33
PDPN-210ENST00000513143 ASB16Q96NS5 453 aa12.99□□□□□ -0.33
PDPN-210ENST00000513143 MYADMQ96S97 322 aa12.99□□□□□ -0.33
PDPN-210ENST00000513143 DCLK3Q9C098 648 aa12.99□□□□□ -0.33
PDPN-210ENST00000513143 SMG9Q9H0W8 520 aaKnown RBP12.99□□□□□ -0.33
PDPN-210ENST00000513143 OSBPL2Q9H1P3 480 aa12.99□□□□□ -0.33
PDPN-210ENST00000513143 KIF9Q9HAQ2 790 aa12.99□□□□□ -0.33
PDPN-210ENST00000513143 TRPV4Q9HBA0 871 aa12.99□□□□□ -0.33
PDPN-210ENST00000513143 DNAI1Q9UI46 699 aa12.99□□□□□ -0.33
PDPN-210ENST00000513143 AP4E1Q9UPM8 1137 aa12.99□□□□□ -0.33
PDPN-210ENST00000513143 CCL26Q9Y258 94 aa12.99□□□□□ -0.33
PDPN-210ENST00000513143 ZFP37Q9Y6Q3 630 aaPredicted RBP12.99□□□□□ -0.33
PDPN-210ENST00000513143 PRUNE2Q8WUY3 3088 aa12.98□□□□□ -0.33
PDPN-210ENST00000513143 E2F8A0AVK6 867 aa12.98□□□□□ -0.33
PDPN-210ENST00000513143 CTAGE9A4FU28 777 aa12.98□□□□□ -0.33
PDPN-210ENST00000513143 MOCS2O96007 188 aaPredicted RBP12.98□□□□□ -0.33
PDPN-210ENST00000513143 IRF1P10914 325 aa12.98□□□□□ -0.33
PDPN-210ENST00000513143 CASQ1P31415 396 aa12.98□□□□□ -0.33
PDPN-210ENST00000513143 GJC1P36383 396 aa12.98□□□□□ -0.33
PDPN-210ENST00000513143 SLC11A2P49281 568 aa12.98□□□□□ -0.33
PDPN-210ENST00000513143 MLLT6P55198 1093 aaPredicted RBP12.98□□□□□ -0.33
PDPN-210ENST00000513143 NRG1Q02297 640 aaPredicted RBP12.98□□□□□ -0.33
PDPN-210ENST00000513143 USP4Q13107 963 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms