RNA–Protein interactions for RNA: ENST00000512962.5

SDHA-215, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 3

Gene SDHA, Length 935 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-215ENST00000512962 SYT15Q9BQS2 421 aa13.03□□□□□ -0.32
SDHA-215ENST00000512962 TRPM5Q9NZQ8 1165 aa13.03□□□□□ -0.32
SDHA-215ENST00000512962 AGO2Q9UKV8 859 aaKnown RBP13.03□□□□□ -0.32
SDHA-215ENST00000512962 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.03□□□□□ -0.32
SDHA-215ENST00000512962 SNX9Q9Y5X1 595 aa13.03□□□□□ -0.32
SDHA-215ENST00000512962 STYXL1Q9Y6J8 313 aa13.03□□□□□ -0.32
SDHA-215ENST00000512962 PTPRJQ12913 1337 aa13.03□□□□□ -0.32
SDHA-215ENST00000512962 PLXNA2O75051 1894 aa13.03□□□□□ -0.32
SDHA-215ENST00000512962 CKAP5Q14008 2032 aa13.03□□□□□ -0.32
SDHA-215ENST00000512962 A0A1B0GTW7 788 aa13.02□□□□□ -0.33
SDHA-215ENST00000512962 F8VP50 259 aa13.02□□□□□ -0.33
SDHA-215ENST00000512962 PLK4O00444 970 aa13.02□□□□□ -0.33
SDHA-215ENST00000512962 HOXC11O43248 304 aaPredicted RBP13.02□□□□□ -0.33
SDHA-215ENST00000512962 EIF5BO60841 1220 aaKnown RBP13.02□□□□□ -0.33
SDHA-215ENST00000512962 MBL2P11226 248 aaPredicted RBP13.02□□□□□ -0.33
SDHA-215ENST00000512962 TRAPPC10P48553 1259 aa13.02□□□□□ -0.33
SDHA-215ENST00000512962 PGFP49763 221 aa13.02□□□□□ -0.33
SDHA-215ENST00000512962 TFAMQ00059 246 aaKnown RBP13.02□□□□□ -0.33
SDHA-215ENST00000512962 GTF2BQ00403 316 aa13.02□□□□□ -0.33
SDHA-215ENST00000512962 MYL7Q01449 175 aa13.02□□□□□ -0.33
SDHA-215ENST00000512962 IFRD2Q12894 506 aaPredicted RBP13.02□□□□□ -0.33
SDHA-215ENST00000512962 TAF10Q12962 218 aa13.02□□□□□ -0.33
SDHA-215ENST00000512962 DHX8Q14562 1220 aaKnown RBP13.02□□□□□ -0.33
SDHA-215ENST00000512962 SMAD1Q15797 465 aaKnown RBP13.02□□□□□ -0.33
SDHA-215ENST00000512962 HLA-BQ31612 363 aa13.02□□□□□ -0.33
SDHA-215ENST00000512962 CCDC157Q569K6 752 aa13.02□□□□□ -0.33
SDHA-215ENST00000512962 ZNF468Q5VIY5 522 aaPredicted RBP13.02□□□□□ -0.33
SDHA-215ENST00000512962 DHRS13Q6UX07 377 aa13.02□□□□□ -0.33
SDHA-215ENST00000512962 LAYNQ6UX15 382 aa13.02□□□□□ -0.33
SDHA-215ENST00000512962 DTHD1Q6ZMT9 781 aa13.02□□□□□ -0.33
SDHA-215ENST00000512962 ZNF605Q86T29 641 aa13.02□□□□□ -0.33
SDHA-215ENST00000512962 MYCT1Q8N699 235 aa13.02□□□□□ -0.33
SDHA-215ENST00000512962 FBXO18Q8NFZ0 1043 aa13.02□□□□□ -0.33
SDHA-215ENST00000512962 SAAL1Q96ER3 474 aa13.02□□□□□ -0.33
SDHA-215ENST00000512962 SPATA17Q96L03 361 aa13.02□□□□□ -0.33
SDHA-215ENST00000512962 FAM124BQ9H5Z6 455 aaPredicted RBP13.02□□□□□ -0.33
SDHA-215ENST00000512962 BLOC1S4Q9NUP1 217 aa13.02□□□□□ -0.33
SDHA-215ENST00000512962 DNAJB12Q9NXW2 375 aaKnown RBP13.02□□□□□ -0.33
SDHA-215ENST00000512962 GMIPQ9P107 970 aa13.02□□□□□ -0.33
SDHA-215ENST00000512962 SUSD2Q9UGT4 822 aa13.02□□□□□ -0.33
SDHA-215ENST00000512962 A0A1B0GVT2 93 aa13.01□□□□□ -0.33
SDHA-215ENST00000512962 METTL12A8MUP2 240 aa13.01□□□□□ -0.33
SDHA-215ENST00000512962 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.01□□□□□ -0.33
SDHA-215ENST00000512962 H0YCG3 227 aa13.01□□□□□ -0.33
SDHA-215ENST00000512962 KCNK3O14649 394 aa13.01□□□□□ -0.33
SDHA-215ENST00000512962 SLC9A3R1O14745 358 aaPredicted RBP13.01□□□□□ -0.33
SDHA-215ENST00000512962 COCHO43405 550 aa13.01□□□□□ -0.33
SDHA-215ENST00000512962 GREM1O60565 184 aa13.01□□□□□ -0.33
SDHA-215ENST00000512962 HUS1O60921 280 aa13.01□□□□□ -0.33
SDHA-215ENST00000512962 ZNF217O75362 1048 aa13.01□□□□□ -0.33
SDHA-215ENST00000512962 ZNF883P0CG24 379 aa13.01□□□□□ -0.33
SDHA-215ENST00000512962 BMP4P12644 408 aa13.01□□□□□ -0.33
SDHA-215ENST00000512962 NCAM1P13591 858 aa13.01□□□□□ -0.33
SDHA-215ENST00000512962 GRIK1P39086 918 aa13.01□□□□□ -0.33
SDHA-215ENST00000512962 EIF2S3P41091 472 aaKnown RBP13.01□□□□□ -0.33
SDHA-215ENST00000512962 GRIA4P48058 902 aa13.01□□□□□ -0.33
SDHA-215ENST00000512962 GAD2Q05329 585 aa13.01□□□□□ -0.33
SDHA-215ENST00000512962 KIAA1324Q6UXG2 1013 aaKnown RBP13.01□□□□□ -0.33
SDHA-215ENST00000512962 LIMS2Q7Z4I7 341 aa13.01□□□□□ -0.33
SDHA-215ENST00000512962 GPBP1Q86WP2 473 aa13.01□□□□□ -0.33
SDHA-215ENST00000512962 CHPFQ8IZ52 775 aa13.01□□□□□ -0.33
SDHA-215ENST00000512962 TMEM86AQ8N2M4 240 aa13.01□□□□□ -0.33
SDHA-215ENST00000512962 TOE1Q96GM8 510 aaKnown RBP13.01□□□□□ -0.33
SDHA-215ENST00000512962 PCED1BQ96HM7 432 aa13.01□□□□□ -0.33
SDHA-215ENST00000512962 FCRL3Q96P31 734 aaPredicted RBP13.01□□□□□ -0.33
SDHA-215ENST00000512962 GPR174Q9BXC1 333 aa13.01□□□□□ -0.33
SDHA-215ENST00000512962 RAB34Q9BZG1 259 aa13.01□□□□□ -0.33
SDHA-215ENST00000512962 BHLHE41Q9C0J9 482 aaPredicted RBP13.01□□□□□ -0.33
SDHA-215ENST00000512962 MIR1-1HGQ9H1L0 117 aa13.01□□□□□ -0.33
SDHA-215ENST00000512962 GDAP2Q9NXN4 497 aa13.01□□□□□ -0.33
SDHA-215ENST00000512962 WSB2Q9NYS7 404 aaPredicted RBP13.01□□□□□ -0.33
SDHA-215ENST00000512962 DEC1Q9P2X7 70 aa13.01□□□□□ -0.33
SDHA-215ENST00000512962 ODF2LQ9ULJ1 636 aa13.01□□□□□ -0.33
SDHA-215ENST00000512962 PPM1HQ9ULR3 514 aa13.01□□□□□ -0.33
SDHA-215ENST00000512962 STARD13Q9Y3M8 1113 aa13.01□□□□□ -0.33
SDHA-215ENST00000512962 KNL1Q8NG31 2342 aa13□□□□□ -0.33
SDHA-215ENST00000512962 CABIN1Q9Y6J0 2220 aa13□□□□□ -0.33
SDHA-215ENST00000512962 MEI4A8MW99 385 aa13□□□□□ -0.33
SDHA-215ENST00000512962 NDUFS2O75306 463 aa13□□□□□ -0.33
SDHA-215ENST00000512962 PFKLP17858 780 aa13□□□□□ -0.33
SDHA-215ENST00000512962 CD6P30203 668 aa13□□□□□ -0.33
SDHA-215ENST00000512962 PRPHP41219 470 aa13□□□□□ -0.33
SDHA-215ENST00000512962 PNPLA4P41247 253 aa13□□□□□ -0.33
SDHA-215ENST00000512962 MATKP42679 507 aa13□□□□□ -0.33
SDHA-215ENST00000512962 ATP11AP98196 1134 aa13□□□□□ -0.33
SDHA-215ENST00000512962 CYP27A1Q02318 531 aa13□□□□□ -0.33
SDHA-215ENST00000512962 ANO4Q32M45 955 aa13□□□□□ -0.33
SDHA-215ENST00000512962 DCAF12L1Q5VU92 463 aa13□□□□□ -0.33
SDHA-215ENST00000512962 TRMT11Q7Z4G4 463 aaKnown RBP13□□□□□ -0.33
SDHA-215ENST00000512962 CACUL1Q86Y37 369 aa13□□□□□ -0.33
SDHA-215ENST00000512962 CCDC83Q8IWF9 413 aa13□□□□□ -0.33
SDHA-215ENST00000512962 KIAA1958Q8N8K9 716 aa13□□□□□ -0.33
SDHA-215ENST00000512962 TMEM102Q8N9M5 508 aaPredicted RBP13□□□□□ -0.33
SDHA-215ENST00000512962 ZDHHC5Q9C0B5 715 aa13□□□□□ -0.33
SDHA-215ENST00000512962 MTMR12Q9C0I1 747 aa13□□□□□ -0.33
SDHA-215ENST00000512962 MKRN2Q9H000 416 aaKnown RBP13□□□□□ -0.33
SDHA-215ENST00000512962 RASSF4Q9H2L5 321 aa13□□□□□ -0.33
SDHA-215ENST00000512962 SPHK2Q9NRA0 654 aa13□□□□□ -0.33
SDHA-215ENST00000512962 KCND2Q9NZV8 630 aa13□□□□□ -0.33
SDHA-215ENST00000512962 MAGEC2Q9UBF1 373 aaPredicted RBP13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms