RNA–Protein interactions for RNA: ENST00000512881.5

RFC1-215, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-215ENST00000512881 INTS13Q9NVM9 706 aa7.36□□□□□ -1.23
RFC1-215ENST00000512881 ZSCAN32Q9NX65 697 aa7.36□□□□□ -1.23
RFC1-215ENST00000512881 GDAP2Q9NXN4 497 aa7.36□□□□□ -1.23
RFC1-215ENST00000512881 DDX43Q9NXZ2 648 aaKnown RBP7.36□□□□□ -1.23
RFC1-215ENST00000512881 SIX4Q9UIU6 781 aa7.36□□□□□ -1.23
RFC1-215ENST00000512881 ITGA11Q9UKX5 1188 aa7.36□□□□□ -1.23
RFC1-215ENST00000512881 R3HCC1Q9Y3T6 440 aaKnown RBP7.36□□□□□ -1.23
RFC1-215ENST00000512881 SNX9Q9Y5X1 595 aa7.36□□□□□ -1.23
RFC1-215ENST00000512881 NOTCH4Q99466 2003 aa7.35□□□□□ -1.23
RFC1-215ENST00000512881 F5P12259 2224 aa7.35□□□□□ -1.23
RFC1-215ENST00000512881 DBX1A6NMT0 343 aa7.35□□□□□ -1.23
RFC1-215ENST00000512881 SLC38A8A6NNN8 435 aa7.35□□□□□ -1.23
RFC1-215ENST00000512881 GABRDO14764 452 aa7.35□□□□□ -1.23
RFC1-215ENST00000512881 EIF3DO15371 548 aaKnown RBP eCLIP7.35□□□□□ -1.23
RFC1-215ENST00000512881 POLR2DO15514 142 aaKnown RBP7.35□□□□□ -1.23
RFC1-215ENST00000512881 KINO60870 393 aaKnown RBP7.35□□□□□ -1.23
RFC1-215ENST00000512881 PRAMEF12O95522 483 aa7.35□□□□□ -1.23
RFC1-215ENST00000512881 HSP90AA1P07900 732 aaKnown RBP7.35□□□□□ -1.23
RFC1-215ENST00000512881 TMEM191BP0C7N4 346 aa7.35□□□□□ -1.23
RFC1-215ENST00000512881 ZSCAN22P10073 491 aaPredicted RBP7.35□□□□□ -1.23
RFC1-215ENST00000512881 CHRNB1P11230 501 aa7.35□□□□□ -1.23
RFC1-215ENST00000512881 HMGA1P17096 107 aaKnown RBP7.35□□□□□ -1.23
RFC1-215ENST00000512881 ACAT1P24752 427 aaKnown RBP7.35□□□□□ -1.23
RFC1-215ENST00000512881 CYP2F1P24903 491 aa7.35□□□□□ -1.23
RFC1-215ENST00000512881 SOX9P48436 509 aa7.35□□□□□ -1.23
RFC1-215ENST00000512881 LHX1P48742 406 aa7.35□□□□□ -1.23
RFC1-215ENST00000512881 GPR15P49685 360 aa7.35□□□□□ -1.23
RFC1-215ENST00000512881 MYL7Q01449 175 aa7.35□□□□□ -1.23
RFC1-215ENST00000512881 MYO1EQ12965 1108 aa7.35□□□□□ -1.23
RFC1-215ENST00000512881 SURF1Q15526 300 aa7.35□□□□□ -1.23
RFC1-215ENST00000512881 DDR2Q16832 855 aa7.35□□□□□ -1.23
RFC1-215ENST00000512881 SOWAHAQ2M3V2 549 aa7.35□□□□□ -1.23
RFC1-215ENST00000512881 ARHGAP29Q52LW3 1261 aa7.35□□□□□ -1.23
RFC1-215ENST00000512881 SDHAF4Q5VUM1 108 aa7.35□□□□□ -1.23
RFC1-215ENST00000512881 TSSK4Q6SA08 328 aa7.35□□□□□ -1.23
RFC1-215ENST00000512881 EPM2AIP1Q7L775 607 aaPredicted RBP7.35□□□□□ -1.23
RFC1-215ENST00000512881 LIMS2Q7Z4I7 341 aa7.35□□□□□ -1.23
RFC1-215ENST00000512881 TMEM150AQ86TG1 271 aa7.35□□□□□ -1.23
RFC1-215ENST00000512881 OSTM1Q86WC4 334 aa7.35□□□□□ -1.23
RFC1-215ENST00000512881 HSCBQ8IWL3 235 aa7.35□□□□□ -1.23
RFC1-215ENST00000512881 CMTM8Q8IZV2 173 aa7.35□□□□□ -1.23
RFC1-215ENST00000512881 SUMF1Q8NBK3 374 aa7.35□□□□□ -1.23
RFC1-215ENST00000512881 ZBTB44Q8NCP5 570 aa7.35□□□□□ -1.23
RFC1-215ENST00000512881 BHLHE22Q8NFJ8 381 aaPredicted RBP7.35□□□□□ -1.23
RFC1-215ENST00000512881 OR5B17Q8NGF7 314 aa7.35□□□□□ -1.23
RFC1-215ENST00000512881 TTC8Q8TAM2 541 aa7.35□□□□□ -1.23
RFC1-215ENST00000512881 RUBCNQ92622 972 aa7.35□□□□□ -1.23
RFC1-215ENST00000512881 NELL1Q92832 810 aa7.35□□□□□ -1.23
RFC1-215ENST00000512881 HPDLQ96IR7 371 aa7.35□□□□□ -1.23
RFC1-215ENST00000512881 ANKRD36BP1Q96IX9 119 aa7.35□□□□□ -1.23
RFC1-215ENST00000512881 ZFYVE19Q96K21 471 aa7.35□□□□□ -1.23
RFC1-215ENST00000512881 KREMEN1Q96MU8 473 aa7.35□□□□□ -1.23
RFC1-215ENST00000512881 PKMYT1Q99640 499 aa7.35□□□□□ -1.23
RFC1-215ENST00000512881 ASPNQ9BXN1 380 aa7.35□□□□□ -1.23
RFC1-215ENST00000512881 MTMR12Q9C0I1 747 aa7.35□□□□□ -1.23
RFC1-215ENST00000512881 KIAA1586Q9HCI6 787 aa7.35□□□□□ -1.23
RFC1-215ENST00000512881 PRMT8Q9NR22 394 aaPredicted RBP7.35□□□□□ -1.23
RFC1-215ENST00000512881 GPATCH2Q9NW75 528 aa7.35□□□□□ -1.23
RFC1-215ENST00000512881 THG1LQ9NWX6 298 aaKnown RBP7.35□□□□□ -1.23
RFC1-215ENST00000512881 OBP2AQ9NY56 170 aa7.35□□□□□ -1.23
RFC1-215ENST00000512881 HSPBP1Q9NZL4 362 aa7.35□□□□□ -1.23
RFC1-215ENST00000512881 DUSP13Q9UII6 198 aa7.35□□□□□ -1.23
RFC1-215ENST00000512881 GTF3C4Q9UKN8 822 aa7.35□□□□□ -1.23
RFC1-215ENST00000512881 PCDHA7Q9UN72 937 aa7.35□□□□□ -1.23
RFC1-215ENST00000512881 PCDHGA2Q9Y5H1 932 aa7.35□□□□□ -1.23
RFC1-215ENST00000512881 PTPRJQ12913 1337 aa7.34□□□□□ -1.23
RFC1-215ENST00000512881 TRIP11Q15643 1979 aa7.34□□□□□ -1.23
RFC1-215ENST00000512881 MYBPHLA2RUH7 354 aa7.34□□□□□ -1.23
RFC1-215ENST00000512881 SPECC1L-ADORA2AF8WAN1 911 aa7.34□□□□□ -1.23
RFC1-215ENST00000512881 CLIC2O15247 247 aa7.34□□□□□ -1.23
RFC1-215ENST00000512881 TGFB1I1O43294 461 aa7.34□□□□□ -1.23
RFC1-215ENST00000512881 HCRTO43612 131 aa7.34□□□□□ -1.23
RFC1-215ENST00000512881 TNNC2P02585 160 aa7.34□□□□□ -1.23
RFC1-215ENST00000512881 HPXP02790 462 aa7.34□□□□□ -1.23
RFC1-215ENST00000512881 CSH1P0DML2 217 aa7.34□□□□□ -1.23
RFC1-215ENST00000512881 CSH2P0DML3 217 aa7.34□□□□□ -1.23
RFC1-215ENST00000512881 TDGF1P13385 188 aa7.34□□□□□ -1.23
RFC1-215ENST00000512881 LMO2P25791 158 aa7.34□□□□□ -1.23
RFC1-215ENST00000512881 DDX6P26196 483 aaKnown RBP eCLIP7.34□□□□□ -1.23
RFC1-215ENST00000512881 PCSK1P29120 753 aa7.34□□□□□ -1.23
RFC1-215ENST00000512881 CASP1P29466 404 aa7.34□□□□□ -1.23
RFC1-215ENST00000512881 ME1P48163 572 aa7.34□□□□□ -1.23
RFC1-215ENST00000512881 SNRPFP62306 86 aaKnown RBP7.34□□□□□ -1.23
RFC1-215ENST00000512881 RPL10AP62906 217 aaKnown RBP7.34□□□□□ -1.23
RFC1-215ENST00000512881 SNRNP35Q16560 246 aaKnown RBP7.34□□□□□ -1.23
RFC1-215ENST00000512881 FAM26FQ5R3K3 315 aa7.34□□□□□ -1.23
RFC1-215ENST00000512881 RESP18Q5W5W9 173 aa7.34□□□□□ -1.23
RFC1-215ENST00000512881 TXNDC8Q6A555 127 aa7.34□□□□□ -1.23
RFC1-215ENST00000512881 ATL3Q6DD88 541 aa7.34□□□□□ -1.23
RFC1-215ENST00000512881 FAM171BQ6P995 826 aa7.34□□□□□ -1.23
RFC1-215ENST00000512881 C1orf228Q6PIY5 440 aa7.34□□□□□ -1.23
RFC1-215ENST00000512881 UNC13DQ70J99 1090 aa7.34□□□□□ -1.23
RFC1-215ENST00000512881 DPH6Q7L8W6 267 aa7.34□□□□□ -1.23
RFC1-215ENST00000512881 TRAPPC11Q7Z392 1133 aa7.34□□□□□ -1.23
RFC1-215ENST00000512881 MON1AQ86VX9 555 aa7.34□□□□□ -1.23
RFC1-215ENST00000512881 RALGPS2Q86X27 583 aaPredicted RBP7.34□□□□□ -1.23
RFC1-215ENST00000512881 CILP2Q8IUL8 1156 aa7.34□□□□□ -1.23
RFC1-215ENST00000512881 SPATA2LQ8IUW3 424 aaPredicted RBP7.34□□□□□ -1.23
RFC1-215ENST00000512881 NELFCDQ8IXH7 590 aa7.34□□□□□ -1.23
RFC1-215ENST00000512881 KIAA2013Q8IYS2 634 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms