RNA–Protein interactions for RNA: ENST00000512334.5

DDX41-214, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 686 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-214ENST00000512334 MRPS21P82921 87 aaKnown RBP16.54■□□□□ 0.24
DDX41-214ENST00000512334 DMC1Q14565 340 aa16.54■□□□□ 0.24
DDX41-214ENST00000512334 MPPE1Q53F39 396 aa16.54■□□□□ 0.24
DDX41-214ENST00000512334 ZC3H12AQ5D1E8 599 aaKnown RBP16.54■□□□□ 0.24
DDX41-214ENST00000512334 RFWD3Q6PCD5 774 aa16.54■□□□□ 0.24
DDX41-214ENST00000512334 TRIM72Q6ZMU5 477 aa16.54■□□□□ 0.24
DDX41-214ENST00000512334 SYT13Q7L8C5 426 aa16.54■□□□□ 0.24
DDX41-214ENST00000512334 ALLCQ8N6M5 410 aa16.54■□□□□ 0.24
DDX41-214ENST00000512334 TXNDC5Q8NBS9 432 aaKnown RBP16.54■□□□□ 0.24
DDX41-214ENST00000512334 RNF34Q969K3 372 aa16.54■□□□□ 0.24
DDX41-214ENST00000512334 TMA16Q96EY4 203 aaKnown RBP16.54■□□□□ 0.24
DDX41-214ENST00000512334 P2RY11Q96G91 374 aa16.54■□□□□ 0.24
DDX41-214ENST00000512334 HHIPQ96QV1 700 aa16.54■□□□□ 0.24
DDX41-214ENST00000512334 ZDHHC4Q9NPG8 344 aa16.54■□□□□ 0.24
DDX41-214ENST00000512334 DDIT4Q9NX09 232 aa16.54■□□□□ 0.24
DDX41-214ENST00000512334 PROB1E7EW31 1015 aa16.53■□□□□ 0.24
DDX41-214ENST00000512334 CYP1A1P04798 512 aaPredicted RBP16.53■□□□□ 0.24
DDX41-214ENST00000512334 FERP16591 822 aa16.53■□□□□ 0.24
DDX41-214ENST00000512334 HOXC13P31276 330 aa16.53■□□□□ 0.24
DDX41-214ENST00000512334 GABRB2P47870 512 aa16.53■□□□□ 0.24
DDX41-214ENST00000512334 PXNP49023 591 aaPredicted RBP16.53■□□□□ 0.24
DDX41-214ENST00000512334 DMWDQ09019 674 aa16.53■□□□□ 0.24
DDX41-214ENST00000512334 NR1I3Q14994 352 aa16.53■□□□□ 0.24
DDX41-214ENST00000512334 MMS22LQ6ZRQ5 1243 aa16.53■□□□□ 0.24
DDX41-214ENST00000512334 XYLT1Q86Y38 959 aa16.53■□□□□ 0.24
DDX41-214ENST00000512334 ZNF513Q8N8E2 541 aaPredicted RBP16.53■□□□□ 0.24
DDX41-214ENST00000512334 ZBTB44Q8NCP5 570 aa16.53■□□□□ 0.24
DDX41-214ENST00000512334 ZNF397Q8NF99 534 aaPredicted RBP16.53■□□□□ 0.24
DDX41-214ENST00000512334 SLC30A5Q8TAD4 765 aa16.53■□□□□ 0.24
DDX41-214ENST00000512334 NELL1Q92832 810 aa16.53■□□□□ 0.24
DDX41-214ENST00000512334 SLC39A13Q96H72 371 aa16.53■□□□□ 0.24
DDX41-214ENST00000512334 DDX50Q9BQ39 737 aaKnown RBP16.53■□□□□ 0.24
DDX41-214ENST00000512334 TSPY26PQ9H489 355 aa16.53■□□□□ 0.24
DDX41-214ENST00000512334 STOML2Q9UJZ1 356 aa16.53■□□□□ 0.24
DDX41-214ENST00000512334 IGLV3-25P01717 112 aa16.52■□□□□ 0.24
DDX41-214ENST00000512334 CISD3P0C7P0 127 aa16.52■□□□□ 0.24
DDX41-214ENST00000512334 SLC6A4P31645 630 aa16.52■□□□□ 0.24
DDX41-214ENST00000512334 NOS2P35228 1153 aa16.52■□□□□ 0.24
DDX41-214ENST00000512334 KIR2DL1P43626 348 aaPredicted RBP16.52■□□□□ 0.24
DDX41-214ENST00000512334 NSFP46459 744 aaKnown RBP16.52■□□□□ 0.24
DDX41-214ENST00000512334 SGSHP51688 502 aa16.52■□□□□ 0.24
DDX41-214ENST00000512334 NME3Q13232 169 aa16.52■□□□□ 0.24
DDX41-214ENST00000512334 LONP2Q86WA8 852 aa16.52■□□□□ 0.24
DDX41-214ENST00000512334 IL17RCQ8NAC3 791 aa16.52■□□□□ 0.24
DDX41-214ENST00000512334 BAP1Q92560 729 aa16.52■□□□□ 0.24
DDX41-214ENST00000512334 AZIN2Q96A70 460 aa16.52■□□□□ 0.24
DDX41-214ENST00000512334 AGPAT1Q99943 283 aa16.52■□□□□ 0.24
DDX41-214ENST00000512334 C11orf70Q9BRQ4 267 aa16.52■□□□□ 0.24
DDX41-214ENST00000512334 SEMA4AQ9H3S1 761 aa16.52■□□□□ 0.24
DDX41-214ENST00000512334 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.52■□□□□ 0.24
DDX41-214ENST00000512334 SLC12A6Q9UHW9 1150 aa16.52■□□□□ 0.24
DDX41-214ENST00000512334 FBXO10Q9UK96 956 aa16.52■□□□□ 0.24
DDX41-214ENST00000512334 CLEC4EQ9ULY5 219 aa16.52■□□□□ 0.24
DDX41-214ENST00000512334 STAP1Q9ULZ2 295 aa16.52■□□□□ 0.24
DDX41-214ENST00000512334 MMP17Q9ULZ9 603 aa16.52■□□□□ 0.24
DDX41-214ENST00000512334 FANCMQ8IYD8 2048 aa16.52■□□□□ 0.23
DDX41-214ENST00000512334 TYW5A2RUC4 315 aaKnown RBP16.51■□□□□ 0.23
DDX41-214ENST00000512334 LRRC53A6NM62 1247 aa16.51■□□□□ 0.23
DDX41-214ENST00000512334 PRRT4C9JH25 899 aa16.51■□□□□ 0.23
DDX41-214ENST00000512334 M0QYT0 321 aa16.51■□□□□ 0.23
DDX41-214ENST00000512334 GFRA3O60609 400 aa16.51■□□□□ 0.23
DDX41-214ENST00000512334 TBL1XO60907 577 aa16.51■□□□□ 0.23
DDX41-214ENST00000512334 APBB3O95704 486 aa16.51■□□□□ 0.23
DDX41-214ENST00000512334 SLC2A3P11169 496 aa16.51■□□□□ 0.23
DDX41-214ENST00000512334 ABCB4P21439 1286 aa16.51■□□□□ 0.23
DDX41-214ENST00000512334 HOXD9P28356 352 aaPredicted RBP16.51■□□□□ 0.23
DDX41-214ENST00000512334 CCR1P32246 355 aa16.51■□□□□ 0.23
DDX41-214ENST00000512334 SCNN1AP37088 669 aa16.51■□□□□ 0.23
DDX41-214ENST00000512334 MATKP42679 507 aa16.51■□□□□ 0.23
DDX41-214ENST00000512334 SULT1E1P49888 294 aa16.51■□□□□ 0.23
DDX41-214ENST00000512334 ASIC2Q16515 512 aa16.51■□□□□ 0.23
DDX41-214ENST00000512334 HSF5Q4G112 596 aaPredicted RBP16.51■□□□□ 0.23
DDX41-214ENST00000512334 FAM133BQ5BKY9 247 aaKnown RBP16.51■□□□□ 0.23
DDX41-214ENST00000512334 EOGTQ5NDL2 527 aa16.51■□□□□ 0.23
DDX41-214ENST00000512334 PIK3R6Q5UE93 754 aa16.51■□□□□ 0.23
DDX41-214ENST00000512334 NADSYN1Q6IA69 706 aa16.51■□□□□ 0.23
DDX41-214ENST00000512334 LRSAM1Q6UWE0 723 aa16.51■□□□□ 0.23
DDX41-214ENST00000512334 TRMT11Q7Z4G4 463 aaKnown RBP16.51■□□□□ 0.23
DDX41-214ENST00000512334 PHLDB2Q86SQ0 1253 aa16.51■□□□□ 0.23
DDX41-214ENST00000512334 CHSY1Q86X52 802 aa16.51■□□□□ 0.23
DDX41-214ENST00000512334 CAMKK1Q8N5S9 505 aa16.51■□□□□ 0.23
DDX41-214ENST00000512334 ATP6V0D2Q8N8Y2 350 aa16.51■□□□□ 0.23
DDX41-214ENST00000512334 TSTD1Q8NFU3 115 aa16.51■□□□□ 0.23
DDX41-214ENST00000512334 PCDHB18PQ96TA0 734 aa16.51■□□□□ 0.23
DDX41-214ENST00000512334 SLC2A11Q9BYW1 496 aa16.51■□□□□ 0.23
DDX41-214ENST00000512334 NUCKS1Q9H1E3 243 aaKnown RBP16.51■□□□□ 0.23
DDX41-214ENST00000512334 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.51■□□□□ 0.23
DDX41-214ENST00000512334 STIM2Q9P246 746 aa16.51■□□□□ 0.23
DDX41-214ENST00000512334 XPO7Q9UIA9 1087 aaKnown RBP16.51■□□□□ 0.23
DDX41-214ENST00000512334 MYO6Q9UM54 1294 aa16.51■□□□□ 0.23
DDX41-214ENST00000512334 SLC27A6Q9Y2P4 619 aa16.51■□□□□ 0.23
DDX41-214ENST00000512334 PRR23AA6NEV1 266 aa16.5■□□□□ 0.23
DDX41-214ENST00000512334 SGK1O00141 431 aa16.5■□□□□ 0.23
DDX41-214ENST00000512334 LMNAP02545 664 aaKnown RBP16.5■□□□□ 0.23
DDX41-214ENST00000512334 UNGP13051 313 aaPredicted RBP16.5■□□□□ 0.23
DDX41-214ENST00000512334 MMP8P22894 467 aa16.5■□□□□ 0.23
DDX41-214ENST00000512334 HOXA6P31267 233 aa16.5■□□□□ 0.23
DDX41-214ENST00000512334 WASP42768 502 aa16.5■□□□□ 0.23
DDX41-214ENST00000512334 CRY1Q16526 586 aa16.5■□□□□ 0.23
DDX41-214ENST00000512334 GEN1Q17RS7 908 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms