RNA–Protein interactions for RNA: ENST00000512229.6

PCDHA4-202, Transcript of protocadherin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene PCDHA4, Length 4,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-202ENST00000512229 MRPS5P82675 430 aaKnown RBP13.47□□□□□ -0.25
PCDHA4-202ENST00000512229 PTRHD1Q6GMV3 140 aaKnown RBP13.47□□□□□ -0.25
PCDHA4-202ENST00000512229 USP13Q92995 863 aaPredicted RBP13.47□□□□□ -0.25
PCDHA4-202ENST00000512229 DRC3Q9H069 523 aa13.47□□□□□ -0.25
PCDHA4-202ENST00000512229 C2orf81A6NN90 581 aa13.47□□□□□ -0.25
PCDHA4-202ENST00000512229 CHRM3P20309 590 aa13.47□□□□□ -0.25
PCDHA4-202ENST00000512229 IKBKEQ14164 716 aa13.47□□□□□ -0.25
PCDHA4-202ENST00000512229 KRT33BQ14525 404 aa13.47□□□□□ -0.25
PCDHA4-202ENST00000512229 EFTUD2Q15029 972 aaKnown RBP eCLIP13.47□□□□□ -0.25
PCDHA4-202ENST00000512229 KCNA10Q16322 511 aa13.47□□□□□ -0.25
PCDHA4-202ENST00000512229 ARHGAP15Q53QZ3 475 aa13.47□□□□□ -0.25
PCDHA4-202ENST00000512229 ZRANB3Q5FWF4 1079 aa13.47□□□□□ -0.25
PCDHA4-202ENST00000512229 TMTC4Q5T4D3 741 aa13.47□□□□□ -0.25
PCDHA4-202ENST00000512229 SLC4A11Q8NBS3 891 aa13.47□□□□□ -0.25
PCDHA4-202ENST00000512229 DDI1Q8WTU0 396 aa13.47□□□□□ -0.25
PCDHA4-202ENST00000512229 UBE2OQ9C0C9 1292 aaKnown RBP13.47□□□□□ -0.25
PCDHA4-202ENST00000512229 PRDM12Q9H4Q4 367 aa13.47□□□□□ -0.25
PCDHA4-202ENST00000512229 CACYBPQ9HB71 228 aaKnown RBP13.47□□□□□ -0.25
PCDHA4-202ENST00000512229 EFR3BQ9Y2G0 817 aa13.47□□□□□ -0.25
PCDHA4-202ENST00000512229 SLC45A1Q9Y2W3 748 aa13.47□□□□□ -0.25
PCDHA4-202ENST00000512229 COL2A1P02458 1487 aaPredicted RBP13.47□□□□□ -0.25
PCDHA4-202ENST00000512229 MAP3K7O43318 606 aa13.47□□□□□ -0.25
PCDHA4-202ENST00000512229 CA12O43570 354 aa13.47□□□□□ -0.25
PCDHA4-202ENST00000512229 LRCH4O75427 683 aa13.47□□□□□ -0.25
PCDHA4-202ENST00000512229 TPH1P17752 444 aa13.47□□□□□ -0.25
PCDHA4-202ENST00000512229 PGM1P36871 562 aa13.47□□□□□ -0.25
PCDHA4-202ENST00000512229 HADHBP55084 474 aaKnown RBP13.47□□□□□ -0.25
PCDHA4-202ENST00000512229 ARHGEF7Q14155 803 aa13.47□□□□□ -0.25
PCDHA4-202ENST00000512229 POU6F1Q14863 301 aa13.47□□□□□ -0.25
PCDHA4-202ENST00000512229 GRAMD1BQ3KR37 738 aa13.47□□□□□ -0.25
PCDHA4-202ENST00000512229 ILDR2Q71H61 639 aa13.47□□□□□ -0.25
PCDHA4-202ENST00000512229 PRUNE1Q86TP1 453 aa13.47□□□□□ -0.25
PCDHA4-202ENST00000512229 FAM35AQ86V20 835 aa13.47□□□□□ -0.25
PCDHA4-202ENST00000512229 IQCKQ8N0W5 287 aa13.47□□□□□ -0.25
PCDHA4-202ENST00000512229 ART4Q93070 314 aa13.47□□□□□ -0.25
PCDHA4-202ENST00000512229 MYLPFQ96A32 169 aa13.47□□□□□ -0.25
PCDHA4-202ENST00000512229 GBP5Q96PP8 586 aa13.47□□□□□ -0.25
PCDHA4-202ENST00000512229 SMPD4Q9NXE4 827 aa13.47□□□□□ -0.25
PCDHA4-202ENST00000512229 VPS28Q9UK41 221 aa13.47□□□□□ -0.25
PCDHA4-202ENST00000512229 MYH6P13533 1939 aa13.47□□□□□ -0.25
PCDHA4-202ENST00000512229 CBX4O00257 560 aa13.46□□□□□ -0.25
PCDHA4-202ENST00000512229 CASQ2O14958 399 aaPredicted RBP13.46□□□□□ -0.25
PCDHA4-202ENST00000512229 TRIM66O15016 1216 aa13.46□□□□□ -0.25
PCDHA4-202ENST00000512229 VNN1O95497 513 aa13.46□□□□□ -0.25
PCDHA4-202ENST00000512229 SERPINF2P08697 491 aa13.46□□□□□ -0.25
PCDHA4-202ENST00000512229 POLD3Q15054 466 aaPredicted RBP13.46□□□□□ -0.25
PCDHA4-202ENST00000512229 DDX53Q86TM3 631 aaKnown RBP13.46□□□□□ -0.25
PCDHA4-202ENST00000512229 YAF2Q8IY57 180 aa13.46□□□□□ -0.25
PCDHA4-202ENST00000512229 UBXN6Q9BZV1 441 aa13.46□□□□□ -0.25
PCDHA4-202ENST00000512229 KLC4Q9NSK0 619 aa13.46□□□□□ -0.25
PCDHA4-202ENST00000512229 ETNK2Q9NVF9 386 aa13.46□□□□□ -0.25
PCDHA4-202ENST00000512229 ADA2Q9NZK5 511 aa13.46□□□□□ -0.25
PCDHA4-202ENST00000512229 VPS9D1Q9Y2B5 631 aa13.46□□□□□ -0.25
PCDHA4-202ENST00000512229 SF3B1O75533 1304 aaKnown RBP eCLIP13.46□□□□□ -0.25
PCDHA4-202ENST00000512229 A0A0A0MRY4 1105 aa13.46□□□□□ -0.25
PCDHA4-202ENST00000512229 FKTNO75072 461 aa13.46□□□□□ -0.25
PCDHA4-202ENST00000512229 SYF2O95926 243 aaKnown RBP13.46□□□□□ -0.25
PCDHA4-202ENST00000512229 MGAT1P26572 445 aa13.46□□□□□ -0.25
PCDHA4-202ENST00000512229 CCL23P55773 120 aa13.46□□□□□ -0.25
PCDHA4-202ENST00000512229 POU5F1Q01860 360 aaKnown RBP13.46□□□□□ -0.25
PCDHA4-202ENST00000512229 MTA1Q13330 715 aa13.46□□□□□ -0.25
PCDHA4-202ENST00000512229 PKN2Q16513 984 aaKnown RBP13.46□□□□□ -0.25
PCDHA4-202ENST00000512229 PARP6Q2NL67 630 aa13.46□□□□□ -0.25
PCDHA4-202ENST00000512229 SLC39A4Q6P5W5 647 aa13.46□□□□□ -0.25
PCDHA4-202ENST00000512229 XYLT1Q86Y38 959 aa13.46□□□□□ -0.25
PCDHA4-202ENST00000512229 CCDC124Q96CT7 223 aaKnown RBP13.46□□□□□ -0.25
PCDHA4-202ENST00000512229 FAXDC2Q96IV6 333 aa13.46□□□□□ -0.25
PCDHA4-202ENST00000512229 SPATA13Q96N96 652 aa13.46□□□□□ -0.25
PCDHA4-202ENST00000512229 FAM124BQ9H5Z6 455 aaPredicted RBP13.46□□□□□ -0.25
PCDHA4-202ENST00000512229 GSTA4O15217 222 aa13.46□□□□□ -0.25
PCDHA4-202ENST00000512229 USP12O75317 370 aa13.46□□□□□ -0.25
PCDHA4-202ENST00000512229 ENDOD1O94919 500 aa13.46□□□□□ -0.25
PCDHA4-202ENST00000512229 ATG7O95352 703 aa13.46□□□□□ -0.25
PCDHA4-202ENST00000512229 UNGP13051 313 aaPredicted RBP13.46□□□□□ -0.25
PCDHA4-202ENST00000512229 STMN1P16949 149 aa13.46□□□□□ -0.25
PCDHA4-202ENST00000512229 AKT1P31749 480 aa13.46□□□□□ -0.25
PCDHA4-202ENST00000512229 GP5P40197 560 aa13.46□□□□□ -0.25
PCDHA4-202ENST00000512229 RGS4P49798 205 aa13.46□□□□□ -0.25
PCDHA4-202ENST00000512229 SERPINB8P50452 374 aa13.46□□□□□ -0.25
PCDHA4-202ENST00000512229 SCNN1BP51168 640 aa13.46□□□□□ -0.25
PCDHA4-202ENST00000512229 HDAC4P56524 1084 aa13.46□□□□□ -0.25
PCDHA4-202ENST00000512229 LILRA4P59901 499 aa13.46□□□□□ -0.25
PCDHA4-202ENST00000512229 KCTD19Q17RG1 926 aaPredicted RBP13.46□□□□□ -0.25
PCDHA4-202ENST00000512229 SPDYE1Q8NFV5 336 aaPredicted RBP13.46□□□□□ -0.25
PCDHA4-202ENST00000512229 GIPC2Q8TF65 315 aa13.46□□□□□ -0.25
PCDHA4-202ENST00000512229 ZBED3Q96IU2 234 aaPredicted RBP13.46□□□□□ -0.25
PCDHA4-202ENST00000512229 FGD4Q96M96 766 aa13.46□□□□□ -0.25
PCDHA4-202ENST00000512229 MINDY3Q9H8M7 445 aa13.46□□□□□ -0.25
PCDHA4-202ENST00000512229 VCX3AQ9NNX9 186 aa13.46□□□□□ -0.25
PCDHA4-202ENST00000512229 ACOT9Q9Y305 439 aa13.46□□□□□ -0.25
PCDHA4-202ENST00000512229 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.46□□□□□ -0.25
PCDHA4-202ENST00000512229 PLCH1Q4KWH8 1693 aa13.46□□□□□ -0.26
PCDHA4-202ENST00000512229 TM9SF1O15321 606 aa13.46□□□□□ -0.26
PCDHA4-202ENST00000512229 MTA2O94776 668 aa13.46□□□□□ -0.26
PCDHA4-202ENST00000512229 RHOBTB1O94844 696 aa13.46□□□□□ -0.26
PCDHA4-202ENST00000512229 KLHL2O95198 593 aa13.46□□□□□ -0.26
PCDHA4-202ENST00000512229 HIST1H2AGP0C0S8 130 aaPredicted RBP13.46□□□□□ -0.26
PCDHA4-202ENST00000512229 GOT1P17174 413 aa13.46□□□□□ -0.26
PCDHA4-202ENST00000512229 ERCC2P18074 760 aa13.46□□□□□ -0.26
PCDHA4-202ENST00000512229 HIST1H2ADP20671 130 aa13.46□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms